RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 ASB1Q9Y576 335 aa13.89□□□□□ -0.19
LIMK1-208ENST00000538333 A0A0J9YYE9 177 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 E2F3O00716 465 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 NRG2O14511 850 aaPredicted RBP13.88□□□□□ -0.19
LIMK1-208ENST00000538333 PRMT5O14744 637 aaPredicted RBP13.88□□□□□ -0.19
LIMK1-208ENST00000538333 ZNF821O75541 412 aaPredicted RBP13.88□□□□□ -0.19
LIMK1-208ENST00000538333 MATN4O95460 622 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 ESRRBO95718 433 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 LINC00032P0C843 101 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 LBPP18428 481 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 CA5AP35218 305 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 RPL26P61254 145 aaKnown RBP13.88□□□□□ -0.19
LIMK1-208ENST00000538333 SLC7A9P82251 487 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 CDKN3Q16667 212 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 OGFOD2Q6N063 350 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 RETSATQ6NUM9 610 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 GPSM1Q86YR5 675 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 GPR65Q8IYL9 337 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 DIS3LQ8TF46 1054 aaKnown RBP13.88□□□□□ -0.19
LIMK1-208ENST00000538333 ACDQ96AP0 544 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 PDLIM5Q96HC4 596 aaKnown RBP13.88□□□□□ -0.19
LIMK1-208ENST00000538333 C19orf43Q9BQ61 176 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 NUSAP1Q9BXS6 441 aaKnown RBP13.88□□□□□ -0.19
LIMK1-208ENST00000538333 CRISPLD2Q9H0B8 497 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 VCXQ9H320 206 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.88□□□□□ -0.19
LIMK1-208ENST00000538333 EVLQ9UI08 416 aaPredicted RBP13.88□□□□□ -0.19
LIMK1-208ENST00000538333 SCOCQ9UIL1 159 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 TMCO1Q9UM00 188 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 ATP11BQ9Y2G3 1177 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 DHRS7Q9Y394 339 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 ASB3Q9Y575 518 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 SLC30A1Q9Y6M5 507 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 BBIP1A8MTZ0 92 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 E5RI56 91 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 RNASEH1O60930 286 aaKnown RBP13.88□□□□□ -0.19
LIMK1-208ENST00000538333 VPS4BO75351 444 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 MLYCDO95822 493 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 TRBC1P01850 177 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 CAPNS1P04632 268 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 C8BP07358 591 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 LYNP07948 512 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 HGFP14210 728 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 UQCRBP14927 111 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 CSNK1DP48730 415 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 ATXN3P54252 364 aaPredicted RBP13.88□□□□□ -0.19
LIMK1-208ENST00000538333 WDR5P61964 334 aaKnown RBP13.88□□□□□ -0.19
LIMK1-208ENST00000538333 LMAN2Q12907 356 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 TGFBIQ15582 683 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 KIF19Q2TAC6 998 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 XKR7Q5GH72 579 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 MPP7Q5T2T1 576 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 CERS6Q6ZMG9 384 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 TICAM1Q8IUC6 712 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 BBS7Q8IWZ6 715 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 MIER2Q8N344 545 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 DDI1Q8WTU0 396 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 VOPP1Q96AW1 172 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 ROPN1LQ96C74 230 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 TUBGCP3Q96CW5 907 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 PCDHAC1Q9H158 963 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 MAP10Q9P2G4 905 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 LSM7Q9UK45 103 aaKnown RBP13.88□□□□□ -0.19
LIMK1-208ENST00000538333 CROTQ9UKG9 612 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 TIMM22Q9Y584 194 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 PCDHB1Q9Y5F3 818 aa13.88□□□□□ -0.19
LIMK1-208ENST00000538333 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.87□□□□□ -0.19
LIMK1-208ENST00000538333 TGM5O43548 720 aa13.87□□□□□ -0.19
LIMK1-208ENST00000538333 UBTFL6P0CB48 400 aaPredicted RBP13.87□□□□□ -0.19
LIMK1-208ENST00000538333 CAPN3P20807 821 aa13.87□□□□□ -0.19
LIMK1-208ENST00000538333 ITGB8P26012 769 aa13.87□□□□□ -0.19
LIMK1-208ENST00000538333 GKP32189 559 aa13.87□□□□□ -0.19
LIMK1-208ENST00000538333 RALGDSQ12967 914 aa13.87□□□□□ -0.19
LIMK1-208ENST00000538333 GRAMD1BQ3KR37 738 aa13.87□□□□□ -0.19
LIMK1-208ENST00000538333 C6orf10Q5SRN2 563 aa13.87□□□□□ -0.19
LIMK1-208ENST00000538333 HS6ST3Q8IZP7 471 aa13.87□□□□□ -0.19
LIMK1-208ENST00000538333 ESAMQ96AP7 390 aa13.87□□□□□ -0.19
LIMK1-208ENST00000538333 BTBD9Q96Q07 612 aa13.87□□□□□ -0.19
LIMK1-208ENST00000538333 GPATCH1Q9BRR8 931 aaKnown RBP13.87□□□□□ -0.19
LIMK1-208ENST00000538333 ZFYVE1Q9HBF4 777 aa13.87□□□□□ -0.19
LIMK1-208ENST00000538333 SARS2Q9NP81 518 aaKnown RBP13.87□□□□□ -0.19
LIMK1-208ENST00000538333 SLC52A3Q9NQ40 469 aa13.87□□□□□ -0.19
LIMK1-208ENST00000538333 PLK2Q9NYY3 685 aa13.87□□□□□ -0.19
LIMK1-208ENST00000538333 CFAP97Q9P2B7 532 aa13.87□□□□□ -0.19
LIMK1-208ENST00000538333 HELZP42694 1942 aaKnown RBP13.87□□□□□ -0.19
LIMK1-208ENST00000538333 PIKFYVEQ9Y2I7 2098 aa13.87□□□□□ -0.19
LIMK1-208ENST00000538333 DOCK6Q96HP0 2047 aa13.87□□□□□ -0.19
LIMK1-208ENST00000538333 CAPN8A6NHC0 703 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 SOCS5O75159 536 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 PRAMEF1O95521 474 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 CKMP06732 381 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 CNPP09543 421 aaKnown RBP13.86□□□□□ -0.19
LIMK1-208ENST00000538333 UROSP10746 265 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 VCLP18206 1134 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 RPS3P23396 243 aaKnown RBP eCLIP13.86□□□□□ -0.19
LIMK1-208ENST00000538333 MRPL19P49406 292 aaKnown RBP13.86□□□□□ -0.19
LIMK1-208ENST00000538333 NME5P56597 212 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 BCL2L1Q07817 233 aa13.86□□□□□ -0.19
LIMK1-208ENST00000538333 TRAP1Q12931 704 aaKnown RBP13.86□□□□□ -0.19
LIMK1-208ENST00000538333 SBSNQ6UWP8 590 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms