RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 TSTD1Q8NFU3 115 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 ACTRT2Q8TDY3 377 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 AKAP1Q92667 903 aaKnown RBP eCLIP4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 ARSGQ96EG1 525 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 RNFT2Q96EX2 444 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 PDLIM2Q96JY6 352 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 SMR3AQ99954 134 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 CHCHD6Q9BRQ6 235 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 C16orf70Q9BSU1 422 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 CIPCQ9C0C6 399 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 USP44Q9H0E7 712 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 MMRN2Q9H8L6 949 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 ZFP14Q9HCL3 533 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 ZNF71Q9NQZ8 489 aaPredicted RBP4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 THSD1Q9NS62 852 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 THAP1Q9NVV9 213 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 HCFC1R1Q9NWW0 138 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 GAR1Q9NY12 217 aaKnown RBP4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 ASIC5Q9NY37 505 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 GDE1Q9NZC3 331 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 RAI14Q9P0K7 980 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 FBXO2Q9UK22 296 aaPredicted RBP4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 ADAM21Q9UKJ8 722 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 NAALADL1Q9UQQ1 740 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 TENM1Q9UKZ4 2725 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 NOTCH4Q99466 2003 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 GRID2IPA4D2P6 1211 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 SH2D7A6NKC9 451 aaPredicted RBP4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 C16orf96A6NNT2 1141 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 CCL16O15467 120 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 ANP32CO43423 234 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 EEF2P13639 858 aaKnown RBP4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 TNNT1P13805 278 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 NDUFS1P28331 727 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 P2RY2P41231 377 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 TMPOP42166 694 aaKnown RBP4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 CCT8P50990 548 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 MVDP53602 400 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 SLC37A1P57057 533 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 KRTAP10-9P60411 292 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 MRPS6P82932 125 aaKnown RBP4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 TBL3Q12788 808 aaKnown RBP4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 BAATQ14032 418 aaPredicted RBP4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 KRT32Q14532 448 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 NFIL3Q16649 462 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 FBLN7Q53RD9 439 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 SLC45A4Q5BKX6 768 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 FAM78AQ5JUQ0 283 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 SPDYCQ5MJ68 293 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 UBAP2Q5T6F2 1119 aaKnown RBP4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 IGFL4Q6B9Z1 124 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 NAPRTQ6XQN6 538 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 C4orf50Q6ZRC1 276 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 SEPT14Q6ZU15 432 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 NEK10Q6ZWH5 1172 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 R3HCC1LQ7Z5L2 792 aaKnown RBP4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 CHD1LQ86WJ1 897 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 ADGRF3Q8IZF5 1079 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 LSMEM2Q8N112 164 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 ENGASEQ8NFI3 743 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 DNAJB3Q8WWF6 145 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 DNAAF4Q8WXU2 420 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 BARD1Q99728 777 aaKnown RBP4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 FUCA2Q9BTY2 467 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 HDHD5Q9BXW7 423 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 CTDSP1Q9GZU7 261 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 GAREM1Q9H706 876 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 SYNPO2LQ9H987 977 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 PLEKHA5Q9HAU0 1116 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 GOLGA2P5Q9HBQ8 144 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 ASCL3Q9NQ33 180 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 RGS18Q9NS28 235 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 LRIT1Q9P2V4 623 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 ORC3Q9UBD5 711 aaPredicted RBP4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 KLQ9UEF7 1012 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 PCDHGA1Q9Y5H4 931 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 ENTPD2Q9Y5L3 495 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 NCANO14594 1321 aa4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 PDS5AQ29RF7 1337 aaKnown RBP4.69□□□□□ -1.66
ECHDC1-223ENST00000534442 CCDC151A5D8V7 595 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 PGPEP1LA6NFU8 196 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 C1QTNF3-AMACRE9PGA6 284 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 CLIC1O00299 241 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 SHOX2O60902 331 aaPredicted RBP4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 TULP3O75386 442 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 TMEM63AO94886 807 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 MT-CO3P00414 261 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 URODP06132 367 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 AKR1B1P15121 316 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 CEBPBP17676 345 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 DRD4P21917 467 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 PPP2R1AP30153 589 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 SLC8A1P32418 973 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 ZNF84P51523 738 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 RPP30P78346 268 aaKnown RBP4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 B4GALNT1Q00973 533 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 HAUS3Q68CZ6 603 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 TMEM88Q6PEY1 159 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 KDM7AQ6ZMT4 941 aa4.68□□□□□ -1.66
ECHDC1-223ENST00000534442 KRTAP19-1Q8IUB9 90 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms