RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 ANKRD12Q6UB98 2062 aa28.2■■■□□ 2.1
SAMD1-202ENST00000533683 ZNF106Q9H2Y7 1883 aaKnown RBP28.19■■■□□ 2.1
SAMD1-202ENST00000533683 STX16-NPEPL1H3BU86 382 aa28.19■■■□□ 2.1
SAMD1-202ENST00000533683 STX16O14662 325 aa28.19■■■□□ 2.1
SAMD1-202ENST00000533683 AZIN1O14977 448 aa28.19■■■□□ 2.1
SAMD1-202ENST00000533683 HSPA1AP0DMV8 641 aaKnown RBP28.19■■■□□ 2.1
SAMD1-202ENST00000533683 HSPA1BP0DMV9 641 aaKnown RBP28.19■■■□□ 2.1
SAMD1-202ENST00000533683 UGT1A6P19224 532 aa28.19■■■□□ 2.1
SAMD1-202ENST00000533683 ITGALP20701 1170 aa28.19■■■□□ 2.1
SAMD1-202ENST00000533683 UGT1A1P22309 533 aa28.19■■■□□ 2.1
SAMD1-202ENST00000533683 UGT1A4P22310 534 aa28.19■■■□□ 2.1
SAMD1-202ENST00000533683 UGT1A3P35503 534 aa28.19■■■□□ 2.1
SAMD1-202ENST00000533683 UGT1A5P35504 534 aa28.19■■■□□ 2.1
SAMD1-202ENST00000533683 AGTR2P50052 363 aa28.19■■■□□ 2.1
SAMD1-202ENST00000533683 HK3P52790 923 aa28.19■■■□□ 2.1
SAMD1-202ENST00000533683 MTTPP55157 894 aa28.19■■■□□ 2.1
SAMD1-202ENST00000533683 LCP2Q13094 533 aa28.19■■■□□ 2.1
SAMD1-202ENST00000533683 ANKS6Q68DC2 871 aa28.19■■■□□ 2.1
SAMD1-202ENST00000533683 PSRC1Q6PGN9 363 aaPredicted RBP28.19■■■□□ 2.1
SAMD1-202ENST00000533683 HMGCLL1Q8TB92 370 aa28.19■■■□□ 2.1
SAMD1-202ENST00000533683 TUBGCP5Q96RT8 1024 aa28.19■■■□□ 2.1
SAMD1-202ENST00000533683 SUV39H2Q9H5I1 410 aa28.19■■■□□ 2.1
SAMD1-202ENST00000533683 SLC25A13Q9UJS0 675 aa28.19■■■□□ 2.1
SAMD1-202ENST00000533683 TRBV5-4A0A0C4DH59 114 aa28.18■■■□□ 2.1
SAMD1-202ENST00000533683 GLYATL1P3A0A0U1RQE8 302 aa28.18■■■□□ 2.1
SAMD1-202ENST00000533683 A0A1B0GTL3 188 aa28.18■■■□□ 2.1
SAMD1-202ENST00000533683 GPC4O75487 556 aa28.18■■■□□ 2.1
SAMD1-202ENST00000533683 PABPC1P11940 636 aaKnown RBP28.18■■■□□ 2.1
SAMD1-202ENST00000533683 CAMK1Q14012 370 aa28.18■■■□□ 2.1
SAMD1-202ENST00000533683 KANK2Q63ZY3 851 aa28.18■■■□□ 2.1
SAMD1-202ENST00000533683 PTRHD1Q6GMV3 140 aaKnown RBP28.18■■■□□ 2.1
SAMD1-202ENST00000533683 CRTC1Q6UUV9 634 aa28.18■■■□□ 2.1
SAMD1-202ENST00000533683 C16orf89Q6UX73 402 aa28.18■■■□□ 2.1
SAMD1-202ENST00000533683 GPSM1Q86YR5 675 aa28.18■■■□□ 2.1
SAMD1-202ENST00000533683 C1QTNF3Q9BXJ4 246 aa28.18■■■□□ 2.1
SAMD1-202ENST00000533683 SEMA4BQ9NPR2 832 aaPredicted RBP28.18■■■□□ 2.1
SAMD1-202ENST00000533683 SPHK2Q9NRA0 654 aa28.18■■■□□ 2.1
SAMD1-202ENST00000533683 HCFC2Q9Y5Z7 792 aa28.18■■■□□ 2.1
SAMD1-202ENST00000533683 WASF2Q9Y6W5 498 aa28.18■■■□□ 2.1
SAMD1-202ENST00000533683 TYRP14679 529 aa28.18■■■□□ 2.1
SAMD1-202ENST00000533683 RPS3P23396 243 aaKnown RBP eCLIP28.18■■■□□ 2.1
SAMD1-202ENST00000533683 CCNHP51946 323 aaPredicted RBP28.18■■■□□ 2.1
SAMD1-202ENST00000533683 SQLEQ14534 574 aa28.18■■■□□ 2.1
SAMD1-202ENST00000533683 CHRNA6Q15825 494 aa28.18■■■□□ 2.1
SAMD1-202ENST00000533683 GEN1Q17RS7 908 aa28.18■■■□□ 2.1
SAMD1-202ENST00000533683 DPY19L3Q6ZPD9 716 aa28.18■■■□□ 2.1
SAMD1-202ENST00000533683 RBFAQ8N0V3 343 aa28.18■■■□□ 2.1
SAMD1-202ENST00000533683 NRG4Q8WWG1 115 aa28.18■■■□□ 2.1
SAMD1-202ENST00000533683 SCRN2Q96FV2 425 aa28.18■■■□□ 2.1
SAMD1-202ENST00000533683 KCNA7Q96RP8 456 aa28.18■■■□□ 2.1
SAMD1-202ENST00000533683 CIPCQ9C0C6 399 aa28.18■■■□□ 2.1
SAMD1-202ENST00000533683 MRGBPQ9NV56 204 aa28.18■■■□□ 2.1
SAMD1-202ENST00000533683 POMPQ9Y244 141 aa28.18■■■□□ 2.1
SAMD1-202ENST00000533683 PRRC2BQ5JSZ5 2229 aaKnown RBP28.17■■■□□ 2.1
SAMD1-202ENST00000533683 LINC01553A4QN01 128 aa28.17■■■□□ 2.1
SAMD1-202ENST00000533683 GK5Q6ZS86 529 aa28.17■■■□□ 2.1
SAMD1-202ENST00000533683 CBARPQ8N350 705 aaPredicted RBP28.17■■■□□ 2.1
SAMD1-202ENST00000533683 HERVK_113Q902F9 699 aa28.17■■■□□ 2.1
SAMD1-202ENST00000533683 PDLIM5Q96HC4 596 aaKnown RBP28.17■■■□□ 2.1
SAMD1-202ENST00000533683 ZSWIM3Q96MP5 696 aa28.17■■■□□ 2.1
SAMD1-202ENST00000533683 TTC1Q99614 292 aa28.17■■■□□ 2.1
SAMD1-202ENST00000533683 EFCAB1Q9HAE3 211 aa28.17■■■□□ 2.1
SAMD1-202ENST00000533683 MCM8Q9UJA3 840 aa28.17■■■□□ 2.1
SAMD1-202ENST00000533683 RPSAP08865 295 aaKnown RBP28.17■■■□□ 2.1
SAMD1-202ENST00000533683 ACRV1P26436 265 aa28.17■■■□□ 2.1
SAMD1-202ENST00000533683 SPAM1P38567 509 aa28.17■■■□□ 2.1
SAMD1-202ENST00000533683 ECT2LQ008S8 904 aa28.17■■■□□ 2.1
SAMD1-202ENST00000533683 ZNF77Q15935 545 aa28.17■■■□□ 2.1
SAMD1-202ENST00000533683 CARD16Q5EG05 197 aa28.17■■■□□ 2.1
SAMD1-202ENST00000533683 TCHHL1Q5QJ38 904 aaPredicted RBP28.17■■■□□ 2.1
SAMD1-202ENST00000533683 GRAMD4Q6IC98 578 aa28.17■■■□□ 2.1
SAMD1-202ENST00000533683 TXNDC11Q6PKC3 985 aa28.17■■■□□ 2.1
SAMD1-202ENST00000533683 CLDN19Q8N6F1 224 aa28.17■■■□□ 2.1
SAMD1-202ENST00000533683 PCDH20Q8N6Y1 951 aaKnown RBP28.17■■■□□ 2.1
SAMD1-202ENST00000533683 TWIST2Q8WVJ9 160 aa28.17■■■□□ 2.1
SAMD1-202ENST00000533683 CPEB1Q9BZB8 566 aaKnown RBP28.17■■■□□ 2.1
SAMD1-202ENST00000533683 ZDHHC6Q9H6R6 413 aa28.17■■■□□ 2.1
SAMD1-202ENST00000533683 PPIL1Q9Y3C6 166 aa28.17■■■□□ 2.1
SAMD1-202ENST00000533683 LRRC42Q9Y546 428 aa28.17■■■□□ 2.1
SAMD1-202ENST00000533683 PTGDR2Q9Y5Y4 395 aa28.17■■■□□ 2.1
SAMD1-202ENST00000533683 PRSS21Q9Y6M0 314 aa28.17■■■□□ 2.1
SAMD1-202ENST00000533683 GOLGA8CPA6NN73 597 aa28.16■■■□□ 2.1
SAMD1-202ENST00000533683 HOXA9P31269 272 aa28.16■■■□□ 2.1
SAMD1-202ENST00000533683 LY6G5CQ5SRR4 150 aa28.16■■■□□ 2.1
SAMD1-202ENST00000533683 TLDC1Q6P9B6 456 aa28.16■■■□□ 2.1
SAMD1-202ENST00000533683 TPRG1Q6ZUI0 275 aa28.16■■■□□ 2.1
SAMD1-202ENST00000533683 UBE2Q1Q7Z7E8 422 aa28.16■■■□□ 2.1
SAMD1-202ENST00000533683 PHOSPHO2Q8TCD6 241 aa28.16■■■□□ 2.1
SAMD1-202ENST00000533683 CEP44Q9C0F1 390 aa28.16■■■□□ 2.1
SAMD1-202ENST00000533683 AKTIPQ9H8T0 292 aa28.16■■■□□ 2.1
SAMD1-202ENST00000533683 FBRSL1Q9HCM7 1045 aaKnown RBP28.16■■■□□ 2.1
SAMD1-202ENST00000533683 PCTPQ9UKL6 214 aa28.16■■■□□ 2.1
SAMD1-202ENST00000533683 PRPF19Q9UMS4 504 aaKnown RBP28.16■■■□□ 2.1
SAMD1-202ENST00000533683 PIP5K1BO14986 540 aa28.16■■■□□ 2.1
SAMD1-202ENST00000533683 POP4O95707 220 aaKnown RBP28.16■■■□□ 2.1
SAMD1-202ENST00000533683 LBX1P52954 281 aa28.16■■■□□ 2.1
SAMD1-202ENST00000533683 PTK2BQ14289 1009 aa28.16■■■□□ 2.1
SAMD1-202ENST00000533683 PRSS36Q5K4E3 855 aa28.16■■■□□ 2.1
SAMD1-202ENST00000533683 ZNF697Q5TEC3 545 aa28.16■■■□□ 2.1
SAMD1-202ENST00000533683 ADIPOR2Q86V24 386 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms