RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 IL2P60568 153 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 NRF1Q16656 503 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 DEFB115Q30KQ5 88 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 LIN52Q52LA3 116 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 HERC6Q8IVU3 1022 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 SLC15A3Q8IY34 581 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 ST13P4Q8IZP2 240 aaPredicted RBP15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 PCYOX1LQ8NBM8 494 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 TTC16Q8NEE8 873 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 OR2T11Q8NH01 316 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 KCNJ9Q92806 393 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 ALG14Q96F25 216 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 TRMT2BQ96GJ1 504 aaKnown RBP15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 CDK15Q96Q40 435 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 HGH1Q9BTY7 390 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 HIPK3Q9H422 1215 aa15.2■□□□□ 0.02
CACNA1E-208ENST00000533229 C7orf72A4D263 438 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 BBIP1A8MTZ0 92 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 ATP6V1B2P21281 511 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 CD9P21926 228 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 CSKP41240 450 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 RHOAP61586 193 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 TGFBIQ15582 683 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 C18orf21Q32NC0 220 aaPredicted RBP15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 C11orf91Q3C1V1 193 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 INO80DQ53TQ3 878 aaPredicted RBP15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 HMBOX1Q6NT76 420 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 BLOC1S3Q6QNY0 202 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 LYSMD3Q7Z3D4 306 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 CAMK1DQ8IU85 385 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 CATSPER1Q8NEC5 780 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 OR52B6Q8NGF0 335 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 AUTS2Q8WXX7 1259 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 CNBD2Q96M20 576 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 TM6SF2Q9BZW4 377 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 FAM192AQ9GZU8 254 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 P2RY12Q9H244 342 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 ABCD2Q9UBJ2 740 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 EIF2B4Q9UI10 523 aaKnown RBP15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 TSR3Q9UJK0 312 aaKnown RBP15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 VPS9D1Q9Y2B5 631 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 NDUFAF1Q9Y375 327 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 E5RI56 91 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 CRCPO75575 148 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 SOD2P04179 222 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 SMIM18P0DKX4 95 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 XKR7Q5GH72 579 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 TXNDC8Q6A555 127 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 AMIGO2Q86SJ2 522 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 DHFR2Q86XF0 187 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 GPSM1Q86YR5 675 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 APCDD1Q8J025 514 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 ARL14EPQ8N8R7 260 aaPredicted RBP15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 CANT1Q8WVQ1 401 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 VPS33AQ96AX1 596 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 EME1Q96AY2 570 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 DUS3LQ96G46 650 aaKnown RBP15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 COQ10BQ9H8M1 238 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 ZNF334Q9HCZ1 680 aaPredicted RBP15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 CMTM6Q9NX76 183 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 CD274Q9NZQ7 290 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 ZNF711Q9Y462 761 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 SNX13Q9Y5W8 968 aa15.19■□□□□ 0.02
CACNA1E-208ENST00000533229 SCN5AQ14524 2016 aa15.18■□□□□ 0.02
CACNA1E-208ENST00000533229 MYOCOSA0A1B0GUC4 107 aa15.18■□□□□ 0.02
CACNA1E-208ENST00000533229 ASPDHA6ND91 283 aa15.18■□□□□ 0.02
CACNA1E-208ENST00000533229 GFRA2O00451 464 aa15.18■□□□□ 0.02
CACNA1E-208ENST00000533229 ANGPT2O15123 496 aa15.18■□□□□ 0.02
CACNA1E-208ENST00000533229 SMAD6O43541 496 aaKnown RBP15.18■□□□□ 0.02
CACNA1E-208ENST00000533229 OR4F21O95013 312 aa15.18■□□□□ 0.02
CACNA1E-208ENST00000533229 CYBBP04839 570 aa15.18■□□□□ 0.02
CACNA1E-208ENST00000533229 IDO1P14902 403 aa15.18■□□□□ 0.02
CACNA1E-208ENST00000533229 SLC6A2P23975 617 aa15.18■□□□□ 0.02
CACNA1E-208ENST00000533229 SLC7A1P30825 629 aa15.18■□□□□ 0.02
CACNA1E-208ENST00000533229 GKP32189 559 aa15.18■□□□□ 0.02
CACNA1E-208ENST00000533229 HMGCLP35914 325 aa15.18■□□□□ 0.02
CACNA1E-208ENST00000533229 GRIA3P42263 894 aa15.18■□□□□ 0.02
CACNA1E-208ENST00000533229 PTGER3P43115 390 aa15.18■□□□□ 0.02
CACNA1E-208ENST00000533229 ADARP55265 1226 aaKnown RBP15.18■□□□□ 0.02
CACNA1E-208ENST00000533229 RPS6KA2Q15349 733 aa15.18■□□□□ 0.02
CACNA1E-208ENST00000533229 MTX3Q5HYI7 312 aa15.18■□□□□ 0.02
CACNA1E-208ENST00000533229 OGFOD2Q6N063 350 aa15.18■□□□□ 0.02
CACNA1E-208ENST00000533229 TXNDC11Q6PKC3 985 aa15.18■□□□□ 0.02
CACNA1E-208ENST00000533229 SLC30A9Q6PML9 568 aa15.18■□□□□ 0.02
CACNA1E-208ENST00000533229 MINDY1Q8N5J2 469 aa15.18■□□□□ 0.02
CACNA1E-208ENST00000533229 PIH1D2Q8WWB5 315 aa15.18■□□□□ 0.02
CACNA1E-208ENST00000533229 VWCEQ96DN2 955 aa15.18■□□□□ 0.02
CACNA1E-208ENST00000533229 SLC29A1Q99808 456 aa15.18■□□□□ 0.02
CACNA1E-208ENST00000533229 HOPXQ9BPY8 73 aaPredicted RBP15.18■□□□□ 0.02
CACNA1E-208ENST00000533229 DNMT3BQ9UBC3 853 aaKnown RBP15.18■□□□□ 0.02
CACNA1E-208ENST00000533229 HSFX1Q9UBD0 423 aa15.18■□□□□ 0.02
CACNA1E-208ENST00000533229 EGFL7Q9UHF1 273 aa15.18■□□□□ 0.02
CACNA1E-208ENST00000533229 ZNF839A8K0R7 811 aa15.17■□□□□ 0.02
CACNA1E-208ENST00000533229 GAPDHSO14556 408 aaPredicted RBP15.17■□□□□ 0.02
CACNA1E-208ENST00000533229 KIF3CO14782 793 aa15.17■□□□□ 0.02
CACNA1E-208ENST00000533229 PGM3O95394 542 aa15.17■□□□□ 0.02
CACNA1E-208ENST00000533229 ESR1P03372 595 aa15.17■□□□□ 0.02
CACNA1E-208ENST00000533229 UROSP10746 265 aa15.17■□□□□ 0.02
CACNA1E-208ENST00000533229 ERVPABLB-1P60509 514 aa15.17■□□□□ 0.02
CACNA1E-208ENST00000533229 MYBPC1Q00872 1141 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms