RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 TIE1P35590 1138 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 CDKN2CP42773 168 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 CCR4P51679 360 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 BMPR2Q13873 1038 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 CLPPQ16740 277 aaPredicted RBP6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 SLC39A12Q504Y0 691 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 KRBOX4Q5JUW0 171 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 ARHGAP36Q6ZRI8 547 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 R3HCC1LQ7Z5L2 792 aaKnown RBP6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 PDSS2Q86YH6 399 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 DPP10Q8N608 796 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 NATD1Q8N6N6 113 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 Q8N9G6 341 aaPredicted RBP6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 ZNF597Q96LX8 424 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 LPIN3Q9BQK8 851 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 SPATA9Q9BWV2 254 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 CD93Q9NPY3 652 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 SORCS3Q9UPU3 1222 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 FZD9O00144 591 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 ZBTB48P10074 688 aaPredicted RBP6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 INSRRP14616 1297 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 JUPP14923 745 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 NOS3P29474 1203 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 HLA-FP30511 346 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 GRK4P32298 578 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 FNTBP49356 437 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 RGS19P49795 217 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 BEX3Q00994 111 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 ACVR2BQ13705 512 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 IKBKEQ14164 716 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 CSHL1Q14406 222 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 DLG2Q15700 870 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 VMACQ2NL98 169 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 FAM214AQ32MH5 1076 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 PPP1R26Q5T8A7 1209 aaPredicted RBP6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 METTL2BQ6P1Q9 378 aaKnown RBP6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 LRRN1Q6UXK5 716 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 ZNF852Q6ZMS4 543 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 LGI2Q8N0V4 545 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 BCL7CQ8WUZ0 217 aaPredicted RBP6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 BAP1Q92560 729 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 USP7Q93009 1102 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 REPS1Q96D71 796 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 TMEM176AQ96HP8 235 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 METTL2AQ96IZ6 378 aaKnown RBP6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 UGT2B28Q9BY64 529 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 ZDHHC6Q9H6R6 413 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 ACTR8Q9H981 624 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 NIT2Q9NQR4 276 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 CCDC167Q9P0B6 97 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 SH3BP4Q9P0V3 963 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 MORF4L1Q9UBU8 362 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 DLGAP4Q9Y2H0 992 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 OR6C65A6NJZ3 312 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 YDJCA8MPS7 323 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 ZNF705EA8MWA4 302 aaPredicted RBP6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 EDF1O60869 148 aaKnown RBP6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 MED24O75448 989 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 PGLSO95336 258 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 RLN1P04808 185 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 PGRP06401 933 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 FCER2P06734 321 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 SERPINA6P08185 405 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 HOXD13P35453 343 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 PRKCIP41743 596 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 SLC15A1P46059 708 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 GPR85P60893 370 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 RHEBQ15382 184 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 FSCN1Q16658 493 aaKnown RBP6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 ATP6AP1LQ52LC2 224 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 UBXN11Q5T124 520 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 C3orf33Q6P1S2 294 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 ILDR2Q71H61 639 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 ZC3H7AQ8IWR0 971 aaKnown RBP6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 IQCKQ8N0W5 287 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 ENGASEQ8NFI3 743 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 ZFPM2Q8WW38 1151 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 SUSD6Q92537 303 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 SNAPC3Q92966 411 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 MKL1Q969V6 931 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 TESCQ96BS2 214 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 TEKT5Q96M29 485 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 FBXO44Q9H4M3 255 aa6.93□□□□□ -1.3
TGFBR3-210ENST00000533089 CYP3A7-CYP3A51PA0A087WV96 503 aa6.92□□□□□ -1.3
TGFBR3-210ENST00000533089 RHPN2P1A8MT19 583 aa6.92□□□□□ -1.3
TGFBR3-210ENST00000533089 RBAK-RBAKDNI3L0D1 243 aa6.92□□□□□ -1.3
TGFBR3-210ENST00000533089 L7N2F9 121 aa6.92□□□□□ -1.3
TGFBR3-210ENST00000533089 VAPBO95292 243 aa6.92□□□□□ -1.3
TGFBR3-210ENST00000533089 CYP3A7P24462 503 aa6.92□□□□□ -1.3
TGFBR3-210ENST00000533089 CCR1P32246 355 aa6.92□□□□□ -1.3
TGFBR3-210ENST00000533089 MYL6P60660 151 aa6.92□□□□□ -1.3
TGFBR3-210ENST00000533089 COL19A1Q14993 1142 aa6.92□□□□□ -1.3
TGFBR3-210ENST00000533089 PDK2Q15119 407 aa6.92□□□□□ -1.3
TGFBR3-210ENST00000533089 SF3B4Q15427 424 aaKnown RBP eCLIP6.92□□□□□ -1.36e-8■□□□□ 8.6
TGFBR3-210ENST00000533089 GRIK5Q16478 980 aa6.92□□□□□ -1.3
TGFBR3-210ENST00000533089 PAPD4Q6PIY7 484 aaKnown RBP6.92□□□□□ -1.3
TGFBR3-210ENST00000533089 DCDC5Q6ZRR9 648 aa6.92□□□□□ -1.3
TGFBR3-210ENST00000533089 CNDP2Q96KP4 475 aaKnown RBP6.92□□□□□ -1.3
TGFBR3-210ENST00000533089 PPP1R10Q96QC0 940 aaKnown RBP6.92□□□□□ -1.3
TGFBR3-210ENST00000533089 CHCHD6Q9BRQ6 235 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms