RNA–Protein interactions for RNA: ENST00000532354.1

CAVIN3-204, Transcript of caveolae associated protein 3, humanhuman

TSL 2

Gene CAVIN3, Length 1,025 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAVIN3-204ENST00000532354 NFKB1P19838 968 aa16.29■□□□□ 0.2
CAVIN3-204ENST00000532354 CSTF2P33240 577 aaKnown RBP eCLIP16.29■□□□□ 0.2
CAVIN3-204ENST00000532354 MARCKSL1P49006 195 aa16.29■□□□□ 0.2
CAVIN3-204ENST00000532354 NFATC2Q13469 925 aa16.29■□□□□ 0.2
CAVIN3-204ENST00000532354 KIR2DS5Q14953 304 aa16.29■□□□□ 0.2
CAVIN3-204ENST00000532354 KDELC1Q6UW63 502 aa16.29■□□□□ 0.2
CAVIN3-204ENST00000532354 SLC9B2Q86UD5 537 aa16.29■□□□□ 0.2
CAVIN3-204ENST00000532354 ZC3H18Q86VM9 953 aaKnown RBP16.29■□□□□ 0.2
CAVIN3-204ENST00000532354 P3H4Q92791 437 aa16.29■□□□□ 0.2
CAVIN3-204ENST00000532354 PMEPA1Q969W9 287 aa16.29■□□□□ 0.2
CAVIN3-204ENST00000532354 SH3KBP1Q96B97 665 aa16.29■□□□□ 0.2
CAVIN3-204ENST00000532354 PRDM8Q9NQV8 689 aa16.29■□□□□ 0.2
CAVIN3-204ENST00000532354 KLC4Q9NSK0 619 aa16.29■□□□□ 0.2
CAVIN3-204ENST00000532354 OCIAD1Q9NX40 245 aa16.29■□□□□ 0.2
CAVIN3-204ENST00000532354 FAM153AQ9UHL3 310 aa16.29■□□□□ 0.2
CAVIN3-204ENST00000532354 TMPRSS11EQ9UL52 423 aa16.29■□□□□ 0.2
CAVIN3-204ENST00000532354 PCDHB11Q9Y5F2 797 aa16.29■□□□□ 0.2
CAVIN3-204ENST00000532354 MTSS1O43312 755 aa16.28■□□□□ 0.2
CAVIN3-204ENST00000532354 DUX1O43812 170 aa16.28■□□□□ 0.2
CAVIN3-204ENST00000532354 EPOP01588 193 aa16.28■□□□□ 0.2
CAVIN3-204ENST00000532354 WNT3AP56704 352 aa16.28■□□□□ 0.2
CAVIN3-204ENST00000532354 NOMO1Q15155 1222 aa16.28■□□□□ 0.2
CAVIN3-204ENST00000532354 MANEAQ5SRI9 462 aa16.28■□□□□ 0.2
CAVIN3-204ENST00000532354 WDR74Q6RFH5 385 aaPredicted RBP16.28■□□□□ 0.2
CAVIN3-204ENST00000532354 ARHGAP22Q7Z5H3 698 aa16.28■□□□□ 0.2
CAVIN3-204ENST00000532354 VASH2Q86V25 355 aa16.28■□□□□ 0.2
CAVIN3-204ENST00000532354 PHYKPLQ8IUZ5 450 aa16.28■□□□□ 0.2
CAVIN3-204ENST00000532354 CCDC170Q8IYT3 715 aa16.28■□□□□ 0.2
CAVIN3-204ENST00000532354 ZNF567Q8N184 647 aa16.28■□□□□ 0.2
CAVIN3-204ENST00000532354 ART4Q93070 314 aa16.28■□□□□ 0.2
CAVIN3-204ENST00000532354 SGF29Q96ES7 293 aa16.28■□□□□ 0.2
CAVIN3-204ENST00000532354 PLEKHG4BQ96PX9 1271 aa16.28■□□□□ 0.2
CAVIN3-204ENST00000532354 FCRL5Q96RD9 977 aa16.28■□□□□ 0.2
CAVIN3-204ENST00000532354 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.28■□□□□ 0.2
CAVIN3-204ENST00000532354 STN1Q9H668 368 aaKnown RBP16.28■□□□□ 0.2
CAVIN3-204ENST00000532354 BPIFA1Q9NP55 256 aa16.28■□□□□ 0.2
CAVIN3-204ENST00000532354 SCHIP1Q9P0W5 487 aaPredicted RBP16.28■□□□□ 0.2
CAVIN3-204ENST00000532354 CPNE7Q9UBL6 633 aa16.28■□□□□ 0.2
CAVIN3-204ENST00000532354 HELZ2Q9BYK8 2649 aaKnown RBP16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 PRR19A6NJB7 356 aa16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 STMND1H3BQB6 276 aa16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 KMOO15229 486 aa16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 VEGFDO43915 354 aa16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 MTX2O75431 263 aa16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 ZNF7P17097 686 aaPredicted RBP16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 WT1P19544 449 aaPredicted RBP16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 HMGCLP35914 325 aa16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 PPM1FP49593 454 aaPredicted RBP16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 EPHA4P54764 986 aa16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 UBE2IP63279 158 aaKnown RBP16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 KHDC1Q4VXA5 237 aaKnown RBP16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 SNAP47Q5SQN1 464 aa16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 C11orf63Q6NUN7 778 aa16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 CRTC3Q6UUV7 619 aa16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 PID1Q7Z2X4 250 aa16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 ZNF605Q86T29 641 aa16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 LRRTM4Q86VH4 590 aa16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 TTC30BQ8N4P2 665 aa16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 BMPERQ8N8U9 685 aa16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 CCDC112Q8NEF3 446 aa16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 HTR3CQ8WXA8 447 aa16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 NCSTNQ92542 709 aa16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 KRT35Q92764 455 aa16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 HAUS1Q96CS2 278 aa16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 OXNAD1Q96HP4 312 aaPredicted RBP16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 MRGPRX2Q96LB1 330 aa16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 VPS35Q96QK1 796 aa16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 VAT1Q99536 393 aa16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 DDA1Q9BW61 102 aa16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 ZMYND15Q9H091 742 aa16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 TRABDQ9H4I3 376 aa16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 SLC39A1Q9NY26 324 aa16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 KLHL8Q9P2G9 620 aaPredicted RBP16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 B3GALT1Q9Y5Z6 326 aa16.27■□□□□ 0.2
CAVIN3-204ENST00000532354 EFCAB7A8K855 629 aa16.26■□□□□ 0.19
CAVIN3-204ENST00000532354 A8MU76 341 aa16.26■□□□□ 0.19
CAVIN3-204ENST00000532354 HACD1B0YJ81 288 aa16.26■□□□□ 0.19
CAVIN3-204ENST00000532354 B4E171 279 aa16.26■□□□□ 0.19
CAVIN3-204ENST00000532354 F5H423 210 aaPredicted RBP16.26■□□□□ 0.19
CAVIN3-204ENST00000532354 CDK14O94921 469 aa16.26■□□□□ 0.19
CAVIN3-204ENST00000532354 XRCC1P18887 633 aaPredicted RBP16.26■□□□□ 0.19
CAVIN3-204ENST00000532354 TSPAN7P41732 249 aa16.26■□□□□ 0.19
CAVIN3-204ENST00000532354 CHRNA4P43681 627 aa16.26■□□□□ 0.19
CAVIN3-204ENST00000532354 SPA17Q15506 151 aa16.26■□□□□ 0.19
CAVIN3-204ENST00000532354 INSCQ1MX18 579 aa16.26■□□□□ 0.19
CAVIN3-204ENST00000532354 PLA2G4EQ3MJ16 856 aa16.26■□□□□ 0.19
CAVIN3-204ENST00000532354 ATP13A5Q4VNC0 1218 aa16.26■□□□□ 0.19
CAVIN3-204ENST00000532354 SIRPB2Q5JXA9 342 aa16.26■□□□□ 0.19
CAVIN3-204ENST00000532354 BBS12Q6ZW61 710 aa16.26■□□□□ 0.19
CAVIN3-204ENST00000532354 CCDC50Q8IVM0 306 aa16.26■□□□□ 0.19
CAVIN3-204ENST00000532354 ZNF547Q8IVP9 402 aa16.26■□□□□ 0.19
CAVIN3-204ENST00000532354 SLC25A41Q8N5S1 370 aa16.26■□□□□ 0.19
CAVIN3-204ENST00000532354 AVL9Q8NBF6 648 aa16.26■□□□□ 0.19
CAVIN3-204ENST00000532354 JPH3Q8WXH2 748 aaPredicted RBP16.26■□□□□ 0.19
CAVIN3-204ENST00000532354 NKD1Q969G9 470 aa16.26■□□□□ 0.19
CAVIN3-204ENST00000532354 MED8Q96G25 268 aa16.26■□□□□ 0.19
CAVIN3-204ENST00000532354 RBM41Q96IZ5 413 aaKnown RBP16.26■□□□□ 0.19
CAVIN3-204ENST00000532354 QKIQ96PU8 341 aaKnown RBP eCLIP16.26■□□□□ 0.19
CAVIN3-204ENST00000532354 TIMM29Q9BSF4 260 aa16.26■□□□□ 0.19
CAVIN3-204ENST00000532354 TBC1D10AQ9BXI6 508 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms