RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 GLOD4Q9HC38 313 aa16.62■□□□□ 0.25
CPSF1-207ENST00000531727 CPNE7Q9UBL6 633 aa16.62■□□□□ 0.25
CPSF1-207ENST00000531727 INTUQ9ULD6 942 aa16.62■□□□□ 0.25
CPSF1-207ENST00000531727 COL6A6A6NMZ7 2263 aa16.62■□□□□ 0.25
CPSF1-207ENST00000531727 AHCTF1Q8WYP5 2266 aa16.61■□□□□ 0.25
CPSF1-207ENST00000531727 A0A0A6YYK5 440 aaPredicted RBP16.61■□□□□ 0.25
CPSF1-207ENST00000531727 A8MU76 341 aa16.61■□□□□ 0.25
CPSF1-207ENST00000531727 CHUKO15111 745 aa16.61■□□□□ 0.25
CPSF1-207ENST00000531727 NDST3O95803 873 aa16.61■□□□□ 0.25
CPSF1-207ENST00000531727 TNNT1P13805 278 aa16.61■□□□□ 0.25
CPSF1-207ENST00000531727 COMTP21964 271 aa16.61■□□□□ 0.25
CPSF1-207ENST00000531727 MAPK9P45984 424 aa16.61■□□□□ 0.25
CPSF1-207ENST00000531727 NOP2P46087 812 aaKnown RBP16.61■□□□□ 0.25
CPSF1-207ENST00000531727 NR2C2P49116 596 aa16.61■□□□□ 0.25
CPSF1-207ENST00000531727 UBE2IP63279 158 aaKnown RBP16.61■□□□□ 0.25
CPSF1-207ENST00000531727 CYP4F2P78329 520 aa16.61■□□□□ 0.25
CPSF1-207ENST00000531727 PRKD1Q15139 912 aaPredicted RBP16.61■□□□□ 0.25
CPSF1-207ENST00000531727 TBR1Q16650 682 aa16.61■□□□□ 0.25
CPSF1-207ENST00000531727 SKOR2Q2VWA4 1001 aaPredicted RBP16.61■□□□□ 0.25
CPSF1-207ENST00000531727 ANKS6Q68DC2 871 aa16.61■□□□□ 0.25
CPSF1-207ENST00000531727 BZW1Q7L1Q6 419 aaKnown RBP16.61■□□□□ 0.25
CPSF1-207ENST00000531727 IL22RA1Q8N6P7 574 aa16.61■□□□□ 0.25
CPSF1-207ENST00000531727 HTR3CQ8WXA8 447 aa16.61■□□□□ 0.25
CPSF1-207ENST00000531727 TEFMQ96QE5 360 aaKnown RBP16.61■□□□□ 0.25
CPSF1-207ENST00000531727 OSGEPL1Q9H4B0 414 aa16.61■□□□□ 0.25
CPSF1-207ENST00000531727 PRDM8Q9NQV8 689 aa16.61■□□□□ 0.25
CPSF1-207ENST00000531727 KLC4Q9NSK0 619 aa16.61■□□□□ 0.25
CPSF1-207ENST00000531727 HYOU1Q9Y4L1 999 aa16.61■□□□□ 0.25
CPSF1-207ENST00000531727 LILRA5A6NI73 299 aa16.6■□□□□ 0.25
CPSF1-207ENST00000531727 KMOO15229 486 aa16.6■□□□□ 0.25
CPSF1-207ENST00000531727 SPOPO43791 374 aa16.6■□□□□ 0.25
CPSF1-207ENST00000531727 BPIP17213 487 aa16.6■□□□□ 0.25
CPSF1-207ENST00000531727 PTPN3P26045 913 aa16.6■□□□□ 0.25
CPSF1-207ENST00000531727 CDKN2BP42772 138 aa16.6■□□□□ 0.25
CPSF1-207ENST00000531727 MC2RQ01718 297 aa16.6■□□□□ 0.25
CPSF1-207ENST00000531727 NFATC3Q12968 1075 aa16.6■□□□□ 0.25
CPSF1-207ENST00000531727 TAZQ16635 292 aa16.6■□□□□ 0.25
CPSF1-207ENST00000531727 CCDC70Q6NSX1 233 aa16.6■□□□□ 0.25
CPSF1-207ENST00000531727 LRRTM4Q86VH4 590 aa16.6■□□□□ 0.25
CPSF1-207ENST00000531727 CNGA4Q8IV77 575 aa16.6■□□□□ 0.25
CPSF1-207ENST00000531727 CACNA2D3Q8IZS8 1091 aa16.6■□□□□ 0.25
CPSF1-207ENST00000531727 TEKT5Q96M29 485 aa16.6■□□□□ 0.25
CPSF1-207ENST00000531727 PLEKHG4BQ96PX9 1271 aa16.6■□□□□ 0.25
CPSF1-207ENST00000531727 TBC1D10AQ9BXI6 508 aa16.6■□□□□ 0.25
CPSF1-207ENST00000531727 SLC12A9Q9BXP2 914 aa16.6■□□□□ 0.25
CPSF1-207ENST00000531727 UCK1Q9HA47 277 aa16.6■□□□□ 0.25
CPSF1-207ENST00000531727 SLC23A2Q9UGH3 650 aa16.6■□□□□ 0.25
CPSF1-207ENST00000531727 SPO11Q9Y5K1 396 aa16.6■□□□□ 0.25
CPSF1-207ENST00000531727 TENM4Q6N022 2769 aa16.59■□□□□ 0.25
CPSF1-207ENST00000531727 PSTPIP1O43586 416 aa16.59■□□□□ 0.25
CPSF1-207ENST00000531727 SLC28A2O43868 658 aa16.59■□□□□ 0.25
CPSF1-207ENST00000531727 VEGFDO43915 354 aa16.59■□□□□ 0.25
CPSF1-207ENST00000531727 RAD1O60671 282 aa16.59■□□□□ 0.25
CPSF1-207ENST00000531727 PMPCBO75439 489 aa16.59■□□□□ 0.25
CPSF1-207ENST00000531727 FAM87AP0C7U9 286 aa16.59■□□□□ 0.25
CPSF1-207ENST00000531727 SFTPCP11686 197 aa16.59■□□□□ 0.25
CPSF1-207ENST00000531727 LIFP15018 202 aa16.59■□□□□ 0.25
CPSF1-207ENST00000531727 TFDP2Q14188 446 aa16.59■□□□□ 0.25
CPSF1-207ENST00000531727 INSCQ1MX18 579 aa16.59■□□□□ 0.25
CPSF1-207ENST00000531727 PLA2G4EQ3MJ16 856 aa16.59■□□□□ 0.25
CPSF1-207ENST00000531727 CRTC3Q6UUV7 619 aa16.59■□□□□ 0.25
CPSF1-207ENST00000531727 TFB1MQ8WVM0 346 aaKnown RBP16.59■□□□□ 0.25
CPSF1-207ENST00000531727 RTP4Q96DX8 246 aa16.59■□□□□ 0.25
CPSF1-207ENST00000531727 TIMM29Q9BSF4 260 aa16.59■□□□□ 0.25
CPSF1-207ENST00000531727 FAM117AQ9C073 453 aa16.59■□□□□ 0.25
CPSF1-207ENST00000531727 TSPY26PQ9H489 355 aa16.59■□□□□ 0.25
CPSF1-207ENST00000531727 FBXO8Q9NRD0 319 aa16.59■□□□□ 0.25
CPSF1-207ENST00000531727 UBP1Q9NZI7 540 aa16.59■□□□□ 0.25
CPSF1-207ENST00000531727 SCHIP1Q9P0W5 487 aaPredicted RBP16.59■□□□□ 0.25
CPSF1-207ENST00000531727 SAE1Q9UBE0 346 aaPredicted RBP16.59■□□□□ 0.25
CPSF1-207ENST00000531727 BSNQ9UPA5 3926 aa16.58■□□□□ 0.25
CPSF1-207ENST00000531727 PRR19A6NJB7 356 aa16.58■□□□□ 0.24
CPSF1-207ENST00000531727 AKR1B15C9JRZ8 316 aaPredicted RBP16.58■□□□□ 0.24
CPSF1-207ENST00000531727 AURKAO14965 403 aa16.58■□□□□ 0.24
CPSF1-207ENST00000531727 CST8O60676 142 aa16.58■□□□□ 0.24
CPSF1-207ENST00000531727 MTX2O75431 263 aa16.58■□□□□ 0.24
CPSF1-207ENST00000531727 PECAM1P16284 738 aaPredicted RBP16.58■□□□□ 0.24
CPSF1-207ENST00000531727 ZNF7P17097 686 aaPredicted RBP16.58■□□□□ 0.24
CPSF1-207ENST00000531727 ITGB6P18564 788 aa16.58■□□□□ 0.24
CPSF1-207ENST00000531727 XRCC1P18887 633 aaPredicted RBP16.58■□□□□ 0.24
CPSF1-207ENST00000531727 CD68P34810 354 aaPredicted RBP16.58■□□□□ 0.24
CPSF1-207ENST00000531727 HADHBP55084 474 aaKnown RBP16.58■□□□□ 0.24
CPSF1-207ENST00000531727 WASHC5Q12768 1159 aa16.58■□□□□ 0.24
CPSF1-207ENST00000531727 CEACAM20Q6UY09 585 aa16.58■□□□□ 0.24
CPSF1-207ENST00000531727 SPOCD1Q6ZMY3 1216 aa16.58■□□□□ 0.24
CPSF1-207ENST00000531727 PLXDC1Q8IUK5 500 aa16.58■□□□□ 0.24
CPSF1-207ENST00000531727 VPS35Q96QK1 796 aa16.58■□□□□ 0.24
CPSF1-207ENST00000531727 ZPBPQ9BS86 351 aa16.58■□□□□ 0.24
CPSF1-207ENST00000531727 SPRY4Q9C004 299 aa16.58■□□□□ 0.24
CPSF1-207ENST00000531727 STARD5Q9NSY2 213 aa16.58■□□□□ 0.24
CPSF1-207ENST00000531727 ZNF624Q9P2J8 865 aaPredicted RBP16.58■□□□□ 0.24
CPSF1-207ENST00000531727 KLHL3Q9UH77 587 aa16.58■□□□□ 0.24
CPSF1-207ENST00000531727 FAM153AQ9UHL3 310 aa16.58■□□□□ 0.24
CPSF1-207ENST00000531727 PILRAQ9UKJ1 303 aa16.58■□□□□ 0.24
CPSF1-207ENST00000531727 TMPRSS11EQ9UL52 423 aa16.58■□□□□ 0.24
CPSF1-207ENST00000531727 HEMK1Q9Y5R4 338 aaPredicted RBP16.58■□□□□ 0.24
CPSF1-207ENST00000531727 MN1Q10571 1320 aaPredicted RBP16.58■□□□□ 0.24
CPSF1-207ENST00000531727 PIEZO2Q9H5I5 2752 aa16.57■□□□□ 0.24
CPSF1-207ENST00000531727 LOC285095A0A1B0GVY8 99 aa16.57■□□□□ 0.24
CPSF1-207ENST00000531727 MTSS1O43312 755 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms