RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 GFERP55789 205 aa9.11□□□□□ -0.95
CHMP4A-205ENST00000531158 ABHD18Q0P651 414 aa9.11□□□□□ -0.95
CHMP4A-205ENST00000531158 NFATC2Q13469 925 aa9.11□□□□□ -0.95
CHMP4A-205ENST00000531158 ZNF235Q14590 738 aa9.11□□□□□ -0.95
CHMP4A-205ENST00000531158 CRTC2Q53ET0 693 aaPredicted RBP9.11□□□□□ -0.95
CHMP4A-205ENST00000531158 ZNF569Q5MCW4 686 aa9.11□□□□□ -0.95
CHMP4A-205ENST00000531158 TEX35Q5T0J7 233 aa9.11□□□□□ -0.95
CHMP4A-205ENST00000531158 C16orf46Q6P387 395 aa9.11□□□□□ -0.95
CHMP4A-205ENST00000531158 SLC35F6Q8N357 371 aa9.11□□□□□ -0.95
CHMP4A-205ENST00000531158 TXLNBQ8N3L3 684 aa9.11□□□□□ -0.95
CHMP4A-205ENST00000531158 PAF1Q8N7H5 531 aa9.11□□□□□ -0.95
CHMP4A-205ENST00000531158 APOBEC4Q8WW27 367 aaKnown RBP9.11□□□□□ -0.95
CHMP4A-205ENST00000531158 DPYSL5Q9BPU6 564 aa9.11□□□□□ -0.95
CHMP4A-205ENST00000531158 KLHL3Q9UH77 587 aa9.11□□□□□ -0.95
CHMP4A-205ENST00000531158 PHTF1Q9UMS5 762 aa9.11□□□□□ -0.95
CHMP4A-205ENST00000531158 A0A0J9YYE9 177 aa9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 FADS2P1A8MWK0 482 aa9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 TMCO5BA8MYB1 307 aa9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 DAPK3O43293 454 aa9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 PRLP01236 227 aa9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 TRBC1P01850 177 aa9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 KRT7P08729 469 aa9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 CYP2A6P11509 494 aaPredicted RBP9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 COL8A1P27658 744 aa9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 HSPA9P38646 679 aaKnown RBP9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 RENBPP51606 427 aa9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 STC1P52823 247 aa9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 SH3BP2P78314 561 aa9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 HHEXQ03014 270 aa9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 CKAP4Q07065 602 aaKnown RBP9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 KLRB1Q12918 225 aa9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 BIRC2Q13490 618 aa9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 LRP8Q14114 963 aa9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 DPYSL2Q16555 572 aa9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 SMTNL2Q2TAL5 461 aa9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 LACTB2Q53H82 288 aaPredicted RBP9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 IYDQ6PHW0 289 aa9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 CEACAM20Q6UY09 585 aa9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 CHST15Q7LFX5 561 aaPredicted RBP9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 POLNQ7Z5Q5 900 aa9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 ATCAYQ86WG3 371 aa9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 GALNT13Q8IUC8 556 aa9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 OR10G6Q8NH81 332 aa9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 NCSTNQ92542 709 aa9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 KIAA1143Q96AT1 154 aaPredicted RBP9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 CSPG4P5Q96PW8 444 aa9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 SLC38A3Q99624 504 aa9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 RIOK2Q9BVS4 552 aaKnown RBP9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 TBC1D10AQ9BXI6 508 aa9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 SARS2Q9NP81 518 aaKnown RBP9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 KCTD5Q9NXV2 234 aa9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 SCHIP1Q9P0W5 487 aaPredicted RBP9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 RAB21Q9UL25 225 aa9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 KCNK6Q9Y257 313 aa9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 REXO2Q9Y3B8 237 aaKnown RBP9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 FBN3Q75N90 2809 aa9.1□□□□□ -0.95
CHMP4A-205ENST00000531158 A0A1W2PQ67 120 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 CTAGE15A4D2H0 777 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 ZW10O43264 779 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 ERLIN1O75477 346 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 DNAJB5O75953 348 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 TIAF1O95411 115 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 LCA5LO95447 670 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 C9P02748 559 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 ANKRD34CP0C6C1 535 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 CTAGE8P0CG41 777 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 ACP5P13686 325 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 TCN2P20062 427 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 IL4RP24394 825 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 DCTP40126 519 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 MMP13P45452 471 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 MAPK9P45984 424 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 VAV2P52735 878 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 EPHA4P54764 986 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 UBE2IP63279 158 aaKnown RBP9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 FAM182AQ5T1J6 154 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 ARMC12Q5T9G4 340 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 ALG1LQ6GMV1 187 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 USP45Q70EL2 814 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 ZNF765Q7L2R6 523 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 CTAGE6Q86UF2 777 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 NLRP8Q86W28 1048 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 PSTKQ8IV42 348 aaKnown RBP9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 CTAGE4Q8IX94 777 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 TEX26Q8N6G2 289 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 NEK11Q8NG66 645 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 EID2BQ96D98 161 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 AHCYL2Q96HN2 611 aaKnown RBP9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 PLEKHG4BQ96PX9 1271 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 RUFY1Q96T51 708 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 CHP1Q99653 195 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 TDRD1Q9BXT4 1180 aaKnown RBP9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 TRIM55Q9BYV6 548 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 ZMYND15Q9H091 742 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 ARFGAP3Q9NP61 516 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 PARVAQ9NVD7 372 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 DONSONQ9NYP3 566 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 DTLQ9NZJ0 730 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 VPS18Q9P253 973 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 CROTQ9UKG9 612 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms