RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 CXCL16Q9H2A7 254 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 IPPKQ9H8X2 491 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 WDR6Q9NNW5 1121 aaKnown RBP14.95□□□□□ -0.02
USP47-207ENST00000527733 HCSTQ9UBK5 93 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 SOCS5O75159 536 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 FCGR1AP12314 374 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 PRKCHP24723 683 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 VIPR1P32241 457 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 RPL3P39023 403 aaKnown RBP14.95□□□□□ -0.02
USP47-207ENST00000527733 ADAM17P78536 824 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 KLHL35Q6PF15 583 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 NUS1Q96E22 293 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 ELOVL2Q9NXB9 296 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 GSAPA4D1B5 854 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 PDE5AO76074 875 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 C8GP07360 202 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 TNNI3P19429 210 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 HSPA7P48741 367 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 CLCQ05315 142 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 SIX1Q15475 284 aaPredicted RBP14.95□□□□□ -0.02
USP47-207ENST00000527733 CHRNA6Q15825 494 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 LRRC26Q2I0M4 334 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 PKDCCQ504Y2 493 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 KLHDC10Q6PID8 442 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 ZNF614Q8N883 585 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 ZNF513Q8N8E2 541 aaPredicted RBP14.95□□□□□ -0.02
USP47-207ENST00000527733 SEC14L1Q92503 715 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 ZSCAN5AQ9BUG6 496 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 FAIM2Q9BWQ8 316 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 ADNPQ9H2P0 1102 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 WDR55Q9H6Y2 383 aaPredicted RBP14.95□□□□□ -0.02
USP47-207ENST00000527733 URADA6NGE7 173 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 FSBPO95073 299 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 AHSGP02765 367 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 ALBP02768 609 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 TLX1P31314 330 aaPredicted RBP14.94□□□□□ -0.02
USP47-207ENST00000527733 HNF4AP41235 474 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 C21orf59P57076 290 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 C1QTNF8P60827 252 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 SULT1C3Q6IMI6 304 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 ZC3HC1Q86WB0 502 aaKnown RBP14.94□□□□□ -0.02
USP47-207ENST00000527733 GPR156Q8NFN8 814 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 FIG4Q92562 907 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 C1orf50Q9BV19 199 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 RIOK2Q9BVS4 552 aaKnown RBP14.94□□□□□ -0.02
USP47-207ENST00000527733 SLC2A11Q9BYW1 496 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 CAAP1Q9H8G2 361 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 EVA1BQ9NVM1 165 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 SOHLH2Q9NX45 425 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 BLOC1S6Q9UL45 172 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 USP3Q9Y6I4 520 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 FPGTO14772 594 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 EIF2S1P05198 315 aaKnown RBP14.94□□□□□ -0.02
USP47-207ENST00000527733 PFKLP17858 780 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 PRKCQQ04759 706 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 EML3Q32P44 896 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 LRRC23Q53EV4 343 aaPredicted RBP14.94□□□□□ -0.02
USP47-207ENST00000527733 RAB41Q5JT25 222 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 ATAD3BQ5T9A4 648 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 NPWQ8N729 165 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 OR10G6Q8NH81 332 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 IL12RB2Q99665 862 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 RAD21L1Q9H4I0 556 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 UBXN8O00124 270 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 EPN2O95208 641 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 KCNH1O95259 989 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 PAQR3Q6TCH7 311 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 PAQR9Q6ZVX9 377 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 ANKRD33Q7Z3H0 272 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 PATL1Q86TB9 770 aaKnown RBP14.94□□□□□ -0.02
USP47-207ENST00000527733 ALYREFQ86V81 257 aaKnown RBP14.94□□□□□ -0.02
USP47-207ENST00000527733 ST13P5Q8NFI4 369 aaPredicted RBP14.94□□□□□ -0.02
USP47-207ENST00000527733 HERPUD2Q9BSE4 406 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 OR2AG1Q9H205 316 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 TFB2MQ9H5Q4 396 aaKnown RBP14.94□□□□□ -0.02
USP47-207ENST00000527733 ZDHHC7Q9NXF8 308 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 CDK5RAP2Q96SN8 1893 aa14.94□□□□□ -0.02
USP47-207ENST00000527733 C16orf96A6NNT2 1141 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 NIPSNAP2O75323 286 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 EN2P19622 333 aaPredicted RBP14.93□□□□□ -0.02
USP47-207ENST00000527733 HSPA13P48723 471 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 PKNOX1P55347 436 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 ZNF776Q68DI1 518 aaPredicted RBP14.93□□□□□ -0.02
USP47-207ENST00000527733 RAD51AP1Q96B01 352 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 PRICKLE1Q96MT3 831 aaPredicted RBP14.93□□□□□ -0.02
USP47-207ENST00000527733 ZNF641Q96N77 438 aaPredicted RBP14.93□□□□□ -0.02
USP47-207ENST00000527733 TUBGCP5Q96RT8 1024 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 MRM3Q9HC36 420 aaKnown RBP14.93□□□□□ -0.02
USP47-207ENST00000527733 RAB23Q9ULC3 237 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 MTF2Q9Y483 593 aaPredicted RBP14.93□□□□□ -0.02
USP47-207ENST00000527733 KCTD3Q9Y597 815 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 DOCK1Q14185 1865 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 HEPACAM2A8MVW5 462 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 VIPP01282 170 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 NTSP30990 170 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 UBAP2LQ14157 1087 aaKnown RBP14.93□□□□□ -0.02
USP47-207ENST00000527733 FAM98BQ52LJ0 330 aaKnown RBP14.93□□□□□ -0.02
USP47-207ENST00000527733 TBCELQ5QJ74 424 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 CEP68Q76N32 757 aa14.93□□□□□ -0.02
USP47-207ENST00000527733 OR9Q1Q8NGQ5 310 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms