RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 BLOC1S5Q8TDH9 187 aa18.34■□□□□ 0.53
CAPN1-203ENST00000525013 AHCYL2Q96HN2 611 aaKnown RBP18.34■□□□□ 0.53
CAPN1-203ENST00000525013 FAM118BQ9BPY3 351 aa18.34■□□□□ 0.53
CAPN1-203ENST00000525013 FSD1LQ9BXM9 530 aa18.34■□□□□ 0.53
CAPN1-203ENST00000525013 OSGEPL1Q9H4B0 414 aa18.34■□□□□ 0.53
CAPN1-203ENST00000525013 STN1Q9H668 368 aaKnown RBP18.34■□□□□ 0.53
CAPN1-203ENST00000525013 KLC4Q9NSK0 619 aa18.34■□□□□ 0.53
CAPN1-203ENST00000525013 EFR3BQ9Y2G0 817 aa18.34■□□□□ 0.53
CAPN1-203ENST00000525013 PCDHGA7Q9Y5G6 932 aa18.34■□□□□ 0.53
CAPN1-203ENST00000525013 IGHV5-10-1A0A0J9YXX1 117 aa18.33■□□□□ 0.52
CAPN1-203ENST00000525013 EIF4E1BA6NMX2 242 aaKnown RBP18.33■□□□□ 0.52
CAPN1-203ENST00000525013 GPR89AB7ZAQ6 455 aa18.33■□□□□ 0.52
CAPN1-203ENST00000525013 MTX2O75431 263 aa18.33■□□□□ 0.52
CAPN1-203ENST00000525013 STK10O94804 968 aaKnown RBP18.33■□□□□ 0.52
CAPN1-203ENST00000525013 GPR89BP0CG08 455 aa18.33■□□□□ 0.52
CAPN1-203ENST00000525013 SLC2A4P14672 509 aa18.33■□□□□ 0.52
CAPN1-203ENST00000525013 HLA-DPA1P20036 260 aa18.33■□□□□ 0.52
CAPN1-203ENST00000525013 HMGCLP35914 325 aa18.33■□□□□ 0.52
CAPN1-203ENST00000525013 HHEXQ03014 270 aa18.33■□□□□ 0.52
CAPN1-203ENST00000525013 KIF5AQ12840 1032 aa18.33■□□□□ 0.52
CAPN1-203ENST00000525013 NFATC2Q13469 925 aa18.33■□□□□ 0.52
CAPN1-203ENST00000525013 C16orf72Q14CZ0 275 aa18.33■□□□□ 0.52
CAPN1-203ENST00000525013 PLA2G4EQ3MJ16 856 aa18.33■□□□□ 0.52
CAPN1-203ENST00000525013 ITPRIPL1Q6GPH6 555 aa18.33■□□□□ 0.52
CAPN1-203ENST00000525013 AADACL2Q6P093 401 aa18.33■□□□□ 0.52
CAPN1-203ENST00000525013 IYDQ6PHW0 289 aa18.33■□□□□ 0.52
CAPN1-203ENST00000525013 DARS2Q6PI48 645 aaKnown RBP18.33■□□□□ 0.52
CAPN1-203ENST00000525013 ZNF574Q6ZN55 896 aaPredicted RBP18.33■□□□□ 0.52
CAPN1-203ENST00000525013 PEX26Q7Z412 305 aa18.33■□□□□ 0.52
CAPN1-203ENST00000525013 TTC30BQ8N4P2 665 aa18.33■□□□□ 0.52
CAPN1-203ENST00000525013 LRRC57Q8N9N7 239 aa18.33■□□□□ 0.52
CAPN1-203ENST00000525013 RCBTB1Q8NDN9 531 aa18.33■□□□□ 0.52
CAPN1-203ENST00000525013 ALG3Q92685 438 aa18.33■□□□□ 0.52
CAPN1-203ENST00000525013 CCDC74BQ96LY2 380 aa18.33■□□□□ 0.52
CAPN1-203ENST00000525013 BBC3Q96PG8 261 aaPredicted RBP18.33■□□□□ 0.52
CAPN1-203ENST00000525013 PLEKHG4BQ96PX9 1271 aa18.33■□□□□ 0.52
CAPN1-203ENST00000525013 DESI2Q9BSY9 194 aa18.33■□□□□ 0.52
CAPN1-203ENST00000525013 GBA3Q9H227 469 aa18.33■□□□□ 0.52
CAPN1-203ENST00000525013 HACD3Q9P035 362 aa18.33■□□□□ 0.52
CAPN1-203ENST00000525013 AMFRQ9UKV5 643 aa18.33■□□□□ 0.52
CAPN1-203ENST00000525013 KCNN4O15554 427 aa18.32■□□□□ 0.52
CAPN1-203ENST00000525013 BUD23O43709 281 aaKnown RBP18.32■□□□□ 0.52
CAPN1-203ENST00000525013 ANXA9O76027 345 aa18.32■□□□□ 0.52
CAPN1-203ENST00000525013 CDK14O94921 469 aa18.32■□□□□ 0.52
CAPN1-203ENST00000525013 TJP3O95049 919 aa18.32■□□□□ 0.52
CAPN1-203ENST00000525013 RBP3P10745 1247 aa18.32■□□□□ 0.52
CAPN1-203ENST00000525013 PYGMP11217 842 aa18.32■□□□□ 0.52
CAPN1-203ENST00000525013 F3P13726 295 aa18.32■□□□□ 0.52
CAPN1-203ENST00000525013 MPSTP25325 297 aa18.32■□□□□ 0.52
CAPN1-203ENST00000525013 PTPN7P35236 360 aa18.32■□□□□ 0.52
CAPN1-203ENST00000525013 ETV5P41161 510 aa18.32■□□□□ 0.52
CAPN1-203ENST00000525013 GEMP55040 296 aa18.32■□□□□ 0.52
CAPN1-203ENST00000525013 GPLD1P80108 840 aa18.32■□□□□ 0.52
CAPN1-203ENST00000525013 INSCQ1MX18 579 aa18.32■□□□□ 0.52
CAPN1-203ENST00000525013 ATP13A5Q4VNC0 1218 aa18.32■□□□□ 0.52
CAPN1-203ENST00000525013 ARHGAP40Q5TG30 622 aa18.32■□□□□ 0.52
CAPN1-203ENST00000525013 GLT6D1Q7Z4J2 308 aa18.32■□□□□ 0.52
CAPN1-203ENST00000525013 TXLNBQ8N3L3 684 aa18.32■□□□□ 0.52
CAPN1-203ENST00000525013 OR10G6Q8NH81 332 aa18.32■□□□□ 0.52
CAPN1-203ENST00000525013 USP7Q93009 1102 aa18.32■□□□□ 0.52
CAPN1-203ENST00000525013 UBL7Q96S82 380 aaPredicted RBP18.32■□□□□ 0.52
CAPN1-203ENST00000525013 FICDQ9BVA6 458 aa18.32■□□□□ 0.52
CAPN1-203ENST00000525013 SARS2Q9NP81 518 aaKnown RBP18.32■□□□□ 0.52
CAPN1-203ENST00000525013 IL26Q9NPH9 171 aa18.32■□□□□ 0.52
CAPN1-203ENST00000525013 PRDM8Q9NQV8 689 aa18.32■□□□□ 0.52
CAPN1-203ENST00000525013 IMPACTQ9P2X3 320 aa18.32■□□□□ 0.52
CAPN1-203ENST00000525013 TRIM10Q9UDY6 481 aa18.32■□□□□ 0.52
CAPN1-203ENST00000525013 DNAJC16Q9Y2G8 782 aa18.32■□□□□ 0.52
CAPN1-203ENST00000525013 PKP3Q9Y446 797 aa18.32■□□□□ 0.52
CAPN1-203ENST00000525013 KMOO15229 486 aa18.31■□□□□ 0.52
CAPN1-203ENST00000525013 NVLO15381 856 aaKnown RBP18.31■□□□□ 0.52
CAPN1-203ENST00000525013 VEGFDO43915 354 aa18.31■□□□□ 0.52
CAPN1-203ENST00000525013 AGTP01019 485 aa18.31■□□□□ 0.52
CAPN1-203ENST00000525013 CSF2RBP32927 897 aa18.31■□□□□ 0.52
CAPN1-203ENST00000525013 LIMK2P53671 638 aa18.31■□□□□ 0.52
CAPN1-203ENST00000525013 CLN3Q13286 438 aa18.31■□□□□ 0.52
CAPN1-203ENST00000525013 PRPSAP1Q14558 356 aa18.31■□□□□ 0.52
CAPN1-203ENST00000525013 KHDC1Q4VXA5 237 aaKnown RBP18.31■□□□□ 0.52
CAPN1-203ENST00000525013 ANKRD20A2Q5SQ80 823 aa18.31■□□□□ 0.52
CAPN1-203ENST00000525013 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.31■□□□□ 0.52
CAPN1-203ENST00000525013 ANKRD20A1Q5TYW2 823 aa18.31■□□□□ 0.52
CAPN1-203ENST00000525013 ANKRD20A3Q5VUR7 823 aa18.31■□□□□ 0.52
CAPN1-203ENST00000525013 ZDHHC20Q5W0Z9 365 aa18.31■□□□□ 0.52
CAPN1-203ENST00000525013 FAM151BQ6UXP7 276 aa18.31■□□□□ 0.52
CAPN1-203ENST00000525013 SLC9B2Q86UD5 537 aa18.31■□□□□ 0.52
CAPN1-203ENST00000525013 LRRTM4Q86VH4 590 aa18.31■□□□□ 0.52
CAPN1-203ENST00000525013 TMEM139Q8IV31 216 aa18.31■□□□□ 0.52
CAPN1-203ENST00000525013 SYCE1Q8N0S2 351 aa18.31■□□□□ 0.52
CAPN1-203ENST00000525013 UBL4BQ8N7F7 174 aa18.31■□□□□ 0.52
CAPN1-203ENST00000525013 OR4D9Q8NGE8 314 aa18.31■□□□□ 0.52
CAPN1-203ENST00000525013 SH3KBP1Q96B97 665 aa18.31■□□□□ 0.52
CAPN1-203ENST00000525013 TTC25Q96NG3 672 aa18.31■□□□□ 0.52
CAPN1-203ENST00000525013 VPS35Q96QK1 796 aa18.31■□□□□ 0.52
CAPN1-203ENST00000525013 DPYSL5Q9BPU6 564 aa18.31■□□□□ 0.52
CAPN1-203ENST00000525013 IL17CQ9P0M4 197 aa18.31■□□□□ 0.52
CAPN1-203ENST00000525013 SLC23A2Q9UGH3 650 aa18.31■□□□□ 0.52
CAPN1-203ENST00000525013 TMPRSS11EQ9UL52 423 aa18.31■□□□□ 0.52
CAPN1-203ENST00000525013 ADGRG1Q9Y653 693 aa18.31■□□□□ 0.52
CAPN1-203ENST00000525013 KIR2DS5A0A0G2JLQ3 304 aa18.3■□□□□ 0.52
CAPN1-203ENST00000525013 PRAMEF33A0A0G2JMD5 474 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms