RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 SMC6Q96SB8 1091 aa5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 DDOQ99489 341 aa5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 HGH1Q9BTY7 390 aa5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 NUP85Q9BW27 656 aa5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 ST6GALNAC4Q9H4F1 302 aa5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 CHMP1AQ9HD42 196 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 PCDHGA5Q9Y5G8 931 aa5.27□□□□□ -1.57
HMGB1P46-201ENST00000520062 HS3ST1O14792 307 aa5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 KCNN4O15554 427 aa5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 SPRY3O43610 288 aa5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 TADA2AO75478 443 aa5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 LCATP04180 440 aa5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 LINGO3P0C6S8 592 aa5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 PRF1P14222 555 aa5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 UGT1A1P22309 533 aa5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 SP100P23497 879 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 BDKRB2P30411 391 aa5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 APOBEC1P41238 236 aaKnown RBP5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 MMP13P45452 471 aa5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 NUDT6P53370 316 aa5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 GAGE2BQ13066 116 aa5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 TNIP1Q15025 636 aa5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 SYT16Q17RD7 645 aa5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 GAGE2EQ4V326 116 aa5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 FSCBQ5H9T9 825 aa5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 ZDHHC20Q5W0Z9 365 aa5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 TMEM211Q6ICI0 200 aa5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 GAGE2AQ6NT46 116 aa5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 DUS1LQ6P1R4 473 aaKnown RBP5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 SLC36A4Q6YBV0 504 aa5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 MRPL10Q7Z7H8 261 aaKnown RBP5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 RASGEF1CQ8N431 466 aa5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 TMEM199Q8N511 208 aa5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 PCDH20Q8N6Y1 951 aaKnown RBP5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 GOT1L1Q8NHS2 421 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 DNAAF4Q8WXU2 420 aa5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 ORAI1Q96D31 301 aa5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 LINC00615Q96LM1 132 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 NLRP4Q96MN2 994 aa5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 JAKMIP1Q96N16 626 aaKnown RBP5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 KXD1Q9BQD3 176 aa5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 RAD21L1Q9H4I0 556 aa5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 NOL11Q9H8H0 719 aaKnown RBP5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 ZBTB40Q9NUA8 1239 aa5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 ABCF3Q9NUQ8 709 aa5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 GAGE2DQ9UEU5 116 aa5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 TINAGQ9UJW2 476 aa5.26□□□□□ -1.57
HMGB1P46-201ENST00000520062 ZNF804BA4D1E1 1349 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 ASTN2O75129 1339 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 B4DGG1 531 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 FAM90A26D6RGX4 464 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 H0YGN5 161 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 PSMA7O14818 248 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 NDUFS7O75251 213 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 ZWINTO95229 277 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 SYF2O95926 243 aaKnown RBP5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 PFKFB1P16118 471 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 TNFRSF1BP20333 461 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 TNNT3P45378 269 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 CCR10P46092 362 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 MXI1P50539 228 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 SEC61BP60468 96 aaKnown RBP5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 SRSF4Q08170 494 aaKnown RBP5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 TRAF1Q13077 416 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 HNF4GQ14541 408 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 MEP1AQ16819 746 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 AMZ1Q400G9 498 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 PXDC1Q5TGL8 231 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 ZNF626Q68DY1 528 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 FAM109BQ6ICB4 259 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 TEX38Q6PEX7 206 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 TRAT1Q6PIZ9 186 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 Q6ZTK2 550 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 IRF2BP2Q7Z5L9 587 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 DNAJB7Q7Z6W7 309 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 GLRX5Q86SX6 157 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 TTC30BQ8N4P2 665 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 GCSAMQ8N6F7 178 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 EMC1Q8N766 993 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 NANOGP1Q8N7R0 232 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 GPATCH11Q8N954 259 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 SETD6Q8TBK2 473 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 TAS1R2Q8TE23 839 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 MS4A10Q96PG2 267 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 GFI1Q99684 422 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 CITED2Q99967 270 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 SPRY4Q9C004 299 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 FAM234AQ9H0X4 552 aa5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 ZFP37Q9Y6Q3 630 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P46-201ENST00000520062 LY6G6EA0A0G2JKS1 128 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 RPS10-NUDT3A0A1W2PQS6 291 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 BECN2A8MW95 431 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 SPRY1O43609 319 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 PLPP2O43688 288 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 ZNF217O75362 1048 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 GAGE7O76087 117 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 KCNK5O95279 499 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 GAGE12FP0CL80 117 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 GAGE12GP0CL81 117 aa5.24□□□□□ -1.57
HMGB1P46-201ENST00000520062 GAGE12IP0CL82 117 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms