RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 VPS35Q96QK1 796 aa12.19□□□□□ -0.46
PCDHGA6-201ENST00000517434 TRPC4Q9UBN4 977 aa12.19□□□□□ -0.46
PCDHGA6-201ENST00000517434 A0A1W2PPM1 405 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 RGS14O43566 566 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 ORC5O43913 435 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 ACSL4O60488 711 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 ECDO95905 644 aaPredicted RBP12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 EPHA3P29320 983 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 CD86P42081 329 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 OR2B6P58173 313 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 ACTR3P61158 418 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 ILF3Q12906 894 aaKnown RBP eCLIP12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 AADACL2Q6P093 401 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 CHST9Q7L1S5 443 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 RBFAQ8N0V3 343 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 PGAM4Q8N0Y7 254 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 PARP8Q8N3A8 854 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 OR2T34Q8NGX1 318 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 OR2T3Q8NH03 318 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 RDH11Q8TC12 318 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 REXO5Q96IC2 774 aaKnown RBP12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 ARHGAP39Q9C0H5 1083 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 MAGEH1Q9H213 219 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 EHD1Q9H4M9 534 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 MAGEE1Q9HCI5 957 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 DNAJC11Q9NVH1 559 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 PTGFRNQ9P2B2 879 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 LIASO43766 372 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 EPHX1P07099 455 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 PBX1P40424 430 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 CDH4P55283 916 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 GNG2P59768 71 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 MED22Q15528 200 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 ALFQ53S48 1182 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 CNSTQ6PJW8 725 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 ADAMTSL2Q86TH1 951 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 ALLCQ8N6M5 410 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 C12orf50Q8NA57 414 aaPredicted RBP12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 WDR48Q8TAF3 677 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 ZC3H10Q96K80 434 aaKnown RBP12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 NODALQ96S42 347 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 CDH19Q9H159 772 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 PHF11Q9UIL8 331 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 MAGEL2Q9UJ55 1249 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 OGDHLQ9ULD0 1010 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 GTF2A1LQ9UNN4 478 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 FOSL2P15408 326 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 IDSP22304 550 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 GRIA4P48058 902 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 SLC9A3P48764 834 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 AP1S1P61966 158 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 NOMO3P69849 1222 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 ARHGAP1Q07960 439 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 FUT2Q10981 343 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 ZBED5Q49AG3 693 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 INTS11Q5TA45 600 aaKnown RBP12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 LCN1P1Q5VSP4 162 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 KCTD8Q6ZWB6 473 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 RASGEF1CQ8N431 466 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 USP7Q93009 1102 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 PTPRHQ9HD43 1115 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 TOR4AQ9NXH8 423 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 SLC17A7Q9P2U7 560 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 ATPIF1Q9UII2 106 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 ABCG2Q9UNQ0 655 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 BBIP1A8MTZ0 92 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 ARHGEF33A8MVX0 844 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 I3L521 148 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 TBX1O43435 398 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 UGT2B11O75310 529 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 SEC22BO75396 215 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 POP4O95707 220 aaKnown RBP12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 ACRP10323 421 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 PRDX6P30041 224 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 PLK1P53350 603 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 CYP4F2P78329 520 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 CYP4F3Q08477 520 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 TMPRSS11AQ6ZMR5 421 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 LRRC55Q6ZSA7 311 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 BBS12Q6ZW61 710 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 MOSPD2Q8NHP6 518 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 RNASE11Q8TAA1 199 aaKnown RBP12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 MYO19Q96H55 970 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 GMLQ99445 158 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 ACE2Q9BYF1 805 aaPredicted RBP12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 GPN1Q9HCN4 374 aaPredicted RBP12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 SNX6Q9UNH7 406 aa12.18□□□□□ -0.46
PCDHGA6-201ENST00000517434 A0A087X0B3 334 aa12.17□□□□□ -0.46
PCDHGA6-201ENST00000517434 NRP2O60462 931 aa12.17□□□□□ -0.46
PCDHGA6-201ENST00000517434 CILPO75339 1184 aa12.17□□□□□ -0.46
PCDHGA6-201ENST00000517434 COX7A2P14406 83 aa12.17□□□□□ -0.46
PCDHGA6-201ENST00000517434 FSHRP23945 695 aa12.17□□□□□ -0.46
PCDHGA6-201ENST00000517434 ADRA1BP35368 520 aa12.17□□□□□ -0.46
PCDHGA6-201ENST00000517434 PTPN9P43378 593 aa12.17□□□□□ -0.46
PCDHGA6-201ENST00000517434 RPS9P46781 194 aaKnown RBP12.17□□□□□ -0.46
PCDHGA6-201ENST00000517434 ADGRE1Q14246 886 aa12.17□□□□□ -0.46
PCDHGA6-201ENST00000517434 PPP1R26Q5T8A7 1209 aaPredicted RBP12.17□□□□□ -0.46
PCDHGA6-201ENST00000517434 PEG10Q86TG7 708 aaKnown RBP12.17□□□□□ -0.46
PCDHGA6-201ENST00000517434 DSELQ8IZU8 1212 aa12.17□□□□□ -0.46
PCDHGA6-201ENST00000517434 MUC13Q9H3R2 512 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms