RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 KIF1CO43896 1103 aaKnown RBP11.4□□□□□ -0.59
RNF4-216ENST00000511859 PGLSO95336 258 aa11.4□□□□□ -0.59
RNF4-216ENST00000511859 ACP5P13686 325 aa11.4□□□□□ -0.59
RNF4-216ENST00000511859 ZNF30P17039 623 aa11.4□□□□□ -0.59
RNF4-216ENST00000511859 ZNF143P52747 638 aaPredicted RBP11.4□□□□□ -0.59
RNF4-216ENST00000511859 GSCP56915 257 aaPredicted RBP11.4□□□□□ -0.59
RNF4-216ENST00000511859 ACY1Q03154 408 aa11.4□□□□□ -0.59
RNF4-216ENST00000511859 CDK18Q07002 472 aa11.4□□□□□ -0.59
RNF4-216ENST00000511859 SLC10A7Q0GE19 358 aa11.4□□□□□ -0.59
RNF4-216ENST00000511859 TUBB3Q13509 450 aa11.4□□□□□ -0.59
RNF4-216ENST00000511859 ARMC12Q5T9G4 340 aa11.4□□□□□ -0.59
RNF4-216ENST00000511859 DPY19L2P1Q6NXN4 242 aa11.4□□□□□ -0.59
RNF4-216ENST00000511859 ZNF517Q6ZMY9 492 aaPredicted RBP11.4□□□□□ -0.59
RNF4-216ENST00000511859 PHYKPLQ8IUZ5 450 aa11.4□□□□□ -0.59
RNF4-216ENST00000511859 TRIM48Q8IWZ4 208 aa11.4□□□□□ -0.59
RNF4-216ENST00000511859 AOPEPQ8N6M6 819 aa11.4□□□□□ -0.59
RNF4-216ENST00000511859 ST6GALNAC3Q8NDV1 305 aa11.4□□□□□ -0.59
RNF4-216ENST00000511859 SLC30A5Q8TAD4 765 aa11.4□□□□□ -0.59
RNF4-216ENST00000511859 EIF3CQ99613 913 aaKnown RBP11.4□□□□□ -0.59
RNF4-216ENST00000511859 C11orf70Q9BRQ4 267 aa11.4□□□□□ -0.59
RNF4-216ENST00000511859 STK33Q9BYT3 514 aa11.4□□□□□ -0.59
RNF4-216ENST00000511859 AGPAT4Q9NRZ5 378 aa11.4□□□□□ -0.59
RNF4-216ENST00000511859 SEMA5BQ9P283 1151 aa11.4□□□□□ -0.59
RNF4-216ENST00000511859 PCYT1BQ9Y5K3 369 aaPredicted RBP11.4□□□□□ -0.59
RNF4-216ENST00000511859 SLC30A1Q9Y6M5 507 aa11.4□□□□□ -0.59
RNF4-216ENST00000511859 NIPBLQ6KC79 2804 aaeCLIP11.39□□□□□ -0.59
RNF4-216ENST00000511859 TTC24A2A3L6 582 aaPredicted RBP11.39□□□□□ -0.59
RNF4-216ENST00000511859 ANKRD62A6NC57 917 aa11.39□□□□□ -0.59
RNF4-216ENST00000511859 A6NL46 340 aa11.39□□□□□ -0.59
RNF4-216ENST00000511859 DFFAO00273 331 aa11.39□□□□□ -0.59
RNF4-216ENST00000511859 LRRTM2O43300 516 aa11.39□□□□□ -0.59
RNF4-216ENST00000511859 KLHL41O60662 606 aa11.39□□□□□ -0.59
RNF4-216ENST00000511859 ATP1A1P05023 1023 aaKnown RBP11.39□□□□□ -0.59
RNF4-216ENST00000511859 KLK3P07288 261 aaPredicted RBP11.39□□□□□ -0.59
RNF4-216ENST00000511859 RAB40ALP0C0E4 278 aa11.39□□□□□ -0.59
RNF4-216ENST00000511859 TNFAIP3P21580 790 aa11.39□□□□□ -0.59
RNF4-216ENST00000511859 SLC19A1P41440 591 aa11.39□□□□□ -0.59
RNF4-216ENST00000511859 MTIF2P46199 727 aaKnown RBP11.39□□□□□ -0.59
RNF4-216ENST00000511859 ZNF235Q14590 738 aa11.39□□□□□ -0.59
RNF4-216ENST00000511859 SKOR2Q2VWA4 1001 aaPredicted RBP11.39□□□□□ -0.59
RNF4-216ENST00000511859 CRB2Q5IJ48 1285 aa11.39□□□□□ -0.59
RNF4-216ENST00000511859 KLHDC7AQ5VTJ3 777 aa11.39□□□□□ -0.59
RNF4-216ENST00000511859 LRRC66Q68CR7 880 aa11.39□□□□□ -0.59
RNF4-216ENST00000511859 IGFL3Q6UXB1 125 aa11.39□□□□□ -0.59
RNF4-216ENST00000511859 RFLNAQ6ZTI6 216 aa11.39□□□□□ -0.59
RNF4-216ENST00000511859 ARHGAP12Q8IWW6 846 aa11.39□□□□□ -0.59
RNF4-216ENST00000511859 BBS5Q8N3I7 341 aa11.39□□□□□ -0.59
RNF4-216ENST00000511859 SIDT2Q8NBJ9 832 aaKnown RBP11.39□□□□□ -0.59
RNF4-216ENST00000511859 UBXN4Q92575 508 aa11.39□□□□□ -0.59
RNF4-216ENST00000511859 MR1Q95460 341 aa11.39□□□□□ -0.59
RNF4-216ENST00000511859 AGAP2Q99490 1192 aa11.39□□□□□ -0.59
RNF4-216ENST00000511859 NOD2Q9HC29 1040 aa11.39□□□□□ -0.59
RNF4-216ENST00000511859 WASH6PQ9NQA3 447 aa11.39□□□□□ -0.59
RNF4-216ENST00000511859 RWDD2AQ9UIY3 292 aa11.39□□□□□ -0.59
RNF4-216ENST00000511859 SNX7Q9UNH6 387 aa11.39□□□□□ -0.59
RNF4-216ENST00000511859 PRSS44E7EML9 344 aa11.38□□□□□ -0.59
RNF4-216ENST00000511859 EEF2KO00418 725 aaKnown RBP11.38□□□□□ -0.59
RNF4-216ENST00000511859 DAPK3O43293 454 aa11.38□□□□□ -0.59
RNF4-216ENST00000511859 CCP110O43303 1012 aa11.38□□□□□ -0.59
RNF4-216ENST00000511859 GRID2O43424 1007 aa11.38□□□□□ -0.59
RNF4-216ENST00000511859 NUAK1O60285 661 aa11.38□□□□□ -0.59
RNF4-216ENST00000511859 CPNE3O75131 537 aaKnown RBP11.38□□□□□ -0.59
RNF4-216ENST00000511859 FOLR1P15328 257 aa11.38□□□□□ -0.59
RNF4-216ENST00000511859 DESP17661 470 aa11.38□□□□□ -0.59
RNF4-216ENST00000511859 CAPZBP47756 277 aa11.38□□□□□ -0.59
RNF4-216ENST00000511859 VAV2P52735 878 aa11.38□□□□□ -0.59
RNF4-216ENST00000511859 CDR2Q01850 454 aa11.38□□□□□ -0.59
RNF4-216ENST00000511859 TRAF2Q12933 501 aa11.38□□□□□ -0.59
RNF4-216ENST00000511859 PTP4A2Q12974 167 aa11.38□□□□□ -0.59
RNF4-216ENST00000511859 VWA5B1Q5TIE3 1220 aa11.38□□□□□ -0.59
RNF4-216ENST00000511859 LYPLAL1Q5VWZ2 237 aa11.38□□□□□ -0.59
RNF4-216ENST00000511859 TRIM72Q6ZMU5 477 aa11.38□□□□□ -0.59
RNF4-216ENST00000511859 ARHGAP36Q6ZRI8 547 aa11.38□□□□□ -0.59
RNF4-216ENST00000511859 FAM92BQ6ZTR7 304 aa11.38□□□□□ -0.59
RNF4-216ENST00000511859 RBM12BQ8IXT5 1001 aaKnown RBP11.38□□□□□ -0.59
RNF4-216ENST00000511859 C3orf20Q8ND61 904 aa11.38□□□□□ -0.59
RNF4-216ENST00000511859 UBE2Q2Q8WVN8 375 aa11.38□□□□□ -0.59
RNF4-216ENST00000511859 PIH1D2Q8WWB5 315 aa11.38□□□□□ -0.59
RNF4-216ENST00000511859 SLC41A2Q96JW4 573 aa11.38□□□□□ -0.59
RNF4-216ENST00000511859 CNPY3Q9BT09 278 aa11.38□□□□□ -0.59
RNF4-216ENST00000511859 RIOK2Q9BVS4 552 aaKnown RBP11.38□□□□□ -0.59
RNF4-216ENST00000511859 NAA15Q9BXJ9 866 aaKnown RBP11.38□□□□□ -0.59
RNF4-216ENST00000511859 ILKAPQ9H0C8 392 aaPredicted RBP11.38□□□□□ -0.59
RNF4-216ENST00000511859 CARD9Q9H257 536 aa11.38□□□□□ -0.59
RNF4-216ENST00000511859 KLC4Q9NSK0 619 aa11.38□□□□□ -0.59
RNF4-216ENST00000511859 ADAM22Q9P0K1 906 aa11.38□□□□□ -0.59
RNF4-216ENST00000511859 ZNF624Q9P2J8 865 aaPredicted RBP11.38□□□□□ -0.59
RNF4-216ENST00000511859 DNPEPQ9ULA0 475 aa11.38□□□□□ -0.59
RNF4-216ENST00000511859 CNOT6Q9ULM6 557 aaKnown RBP11.38□□□□□ -0.59
RNF4-216ENST00000511859 FHOD1Q9Y613 1164 aa11.38□□□□□ -0.59
RNF4-216ENST00000511859 SPG11Q96JI7 2443 aa11.37□□□□□ -0.59
RNF4-216ENST00000511859 ANKRD12Q6UB98 2062 aa11.37□□□□□ -0.59
RNF4-216ENST00000511859 SYCE3A1L190 88 aa11.37□□□□□ -0.59
RNF4-216ENST00000511859 JCHAINP01591 159 aa11.37□□□□□ -0.59
RNF4-216ENST00000511859 ALPPP05187 535 aa11.37□□□□□ -0.59
RNF4-216ENST00000511859 CALB1P05937 261 aa11.37□□□□□ -0.59
RNF4-216ENST00000511859 UNGP13051 313 aaPredicted RBP11.37□□□□□ -0.59
RNF4-216ENST00000511859 UCHL3P15374 230 aa11.37□□□□□ -0.59
RNF4-216ENST00000511859 CTPS1P17812 591 aa11.37□□□□□ -0.59
RNF4-216ENST00000511859 ERCC2P18074 760 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms