RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 LSM3P62310 102 aaKnown RBP13.2□□□□□ -0.3
LETM1-203ENST00000505551 GPLD1P80108 840 aa13.2□□□□□ -0.3
LETM1-203ENST00000505551 KRR1Q13601 381 aaKnown RBP13.2□□□□□ -0.3
LETM1-203ENST00000505551 PYCR3Q53H96 274 aa13.2□□□□□ -0.3
LETM1-203ENST00000505551 YIF1BQ5BJH7 314 aa13.2□□□□□ -0.3
LETM1-203ENST00000505551 KIAA1614Q5VZ46 1190 aa13.2□□□□□ -0.3
LETM1-203ENST00000505551 FAM160B1Q5W0V3 765 aa13.2□□□□□ -0.3
LETM1-203ENST00000505551 GALNT7Q86SF2 657 aa13.2□□□□□ -0.3
LETM1-203ENST00000505551 METTL4Q8N3J2 472 aa13.2□□□□□ -0.3
LETM1-203ENST00000505551 CCNYL1Q8N7R7 359 aa13.2□□□□□ -0.3
LETM1-203ENST00000505551 FAM83FQ8NEG4 500 aaPredicted RBP13.2□□□□□ -0.3
LETM1-203ENST00000505551 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.2□□□□□ -0.3
LETM1-203ENST00000505551 ST6GAL2Q96JF0 529 aa13.2□□□□□ -0.3
LETM1-203ENST00000505551 MCM3APO60318 1980 aa13.2□□□□□ -0.3
LETM1-203ENST00000505551 A0A0A0MRY4 1105 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 C2CD4BA6NLJ0 364 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 PDZK1P1A8MUH7 402 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 F5H423 210 aaPredicted RBP13.19□□□□□ -0.3
LETM1-203ENST00000505551 INO80B-WBP1J3KQ70 363 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 SLC4A1P02730 911 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 CCNA1P78396 465 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 FPGSQ05932 587 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 LAMTOR4Q0VGL1 99 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 TAF12Q16514 161 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 MEP1AQ16819 746 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 OTUD3Q5T2D3 398 aaPredicted RBP13.19□□□□□ -0.3
LETM1-203ENST00000505551 METTL11BQ5VVY1 283 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 TTC23Q5W5X9 447 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 BEND5Q7L4P6 421 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 PIWIL4Q7Z3Z4 852 aaKnown RBP13.19□□□□□ -0.3
LETM1-203ENST00000505551 FAM35AQ86V20 835 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 P2RY8Q86VZ1 359 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 SLC22A15Q8IZD6 547 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 FSTL5Q8N475 847 aaPredicted RBP13.19□□□□□ -0.3
LETM1-203ENST00000505551 SMG8Q8ND04 991 aaKnown RBP13.19□□□□□ -0.3
LETM1-203ENST00000505551 AFG1LQ8WV93 481 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 AURKBQ96GD4 344 aaPredicted RBP13.19□□□□□ -0.3
LETM1-203ENST00000505551 PAWRQ96IZ0 340 aaKnown RBP13.19□□□□□ -0.3
LETM1-203ENST00000505551 SPATA13Q96N96 652 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 ADPGKQ9BRR6 497 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 TTPALQ9BTX7 342 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 BDH2Q9BUT1 245 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 ASPSCR1Q9BZE9 553 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 OSBPL2Q9H1P3 480 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 SCPEP1Q9HB40 452 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 GTSE1Q9NYZ3 720 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 A0A0G2JMP0 313 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 A0A1W2PRQ8 180 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 GRXCR2A6NFK2 248 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 AGAP5A6NIR3 686 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 ZNF487B1APH4 448 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 UPK1AO00322 258 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 OR3A3P47888 321 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 GLRBP48167 497 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 PTPN5P54829 565 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 NCS1P62166 190 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 CA9Q16790 459 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 COLEC12Q5KU26 742 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 CELF3Q5SZQ8 465 aaKnown RBP13.19□□□□□ -0.3
LETM1-203ENST00000505551 FAM102AQ5T9C2 384 aaPredicted RBP13.19□□□□□ -0.3
LETM1-203ENST00000505551 HEATR6Q6AI08 1181 aaKnown RBP13.19□□□□□ -0.3
LETM1-203ENST00000505551 PTRH1Q86Y79 214 aaKnown RBP13.19□□□□□ -0.3
LETM1-203ENST00000505551 UBQLNLQ8IYU4 475 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 CADM2Q8N3J6 435 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.19□□□□□ -0.3
LETM1-203ENST00000505551 MCFD2Q8NI22 146 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 SLC22A8Q8TCC7 542 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 BPIFB1Q8TDL5 484 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 RXFP2Q8WXD0 754 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 NXNL1Q96CM4 212 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 VPS39Q96JC1 886 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 TSNARE1Q96NA8 513 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 RDH12Q96NR8 316 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 CITED4Q96RK1 184 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 ZNF717Q9BY31 904 aaPredicted RBP13.19□□□□□ -0.3
LETM1-203ENST00000505551 NIFKQ9BYG3 293 aaKnown RBP13.19□□□□□ -0.3
LETM1-203ENST00000505551 EPS8L2Q9H6S3 715 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 NTN4Q9HB63 628 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 TM9SF3Q9HD45 589 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 PLSCR3Q9NRY6 295 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 LCTP09848 1927 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 WDR81Q562E7 1941 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 SBF1O95248 1867 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 IGKV6D-21A0A0A0MT36 114 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 SLC1A7O00341 560 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 SHOXO15266 292 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 GAS2O43903 313 aaKnown RBP13.19□□□□□ -0.3
LETM1-203ENST00000505551 SOAT2O75908 522 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 CAPN1P07384 714 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 MTHFD1P11586 935 aaKnown RBP13.19□□□□□ -0.3
LETM1-203ENST00000505551 SLC6A2P23975 617 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 HADHAP40939 763 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 MYL6P60660 151 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 EMX1Q04741 257 aaPredicted RBP13.19□□□□□ -0.3
LETM1-203ENST00000505551 CD47Q08722 323 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 TARBP2Q15633 366 aaKnown RBP13.19□□□□□ -0.3
LETM1-203ENST00000505551 ANO4Q32M45 955 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 BSPRYQ5W0U4 402 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 SMYD5Q6GMV2 418 aa13.19□□□□□ -0.3
LETM1-203ENST00000505551 SPATC1Q76KD6 591 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms