RNA–Protein interactions for RNA: ENST00000498535.1

MKRN1-216, Transcript of makorin ring finger protein 1, humanhuman

TSL 2

Gene MKRN1, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1-216ENST00000498535 COL12A1Q99715 3063 aa25.02■■□□□ 1.6
MKRN1-216ENST00000498535 LOC101059948A0A1B0GTJ6 334 aa25.02■■□□□ 1.6
MKRN1-216ENST00000498535 LILRA5A6NI73 299 aa25.02■■□□□ 1.6
MKRN1-216ENST00000498535 GYPCP04921 128 aa25.02■■□□□ 1.6
MKRN1-216ENST00000498535 TLE1Q04724 770 aa25.02■■□□□ 1.6
MKRN1-216ENST00000498535 AP1B1Q10567 949 aa25.02■■□□□ 1.6
MKRN1-216ENST00000498535 ZBTB17Q13105 803 aa25.02■■□□□ 1.6
MKRN1-216ENST00000498535 TRIM48Q8IWZ4 208 aa25.02■■□□□ 1.6
MKRN1-216ENST00000498535 UNC5BQ8IZJ1 945 aa25.02■■□□□ 1.6
MKRN1-216ENST00000498535 CNTD1Q8N815 330 aa25.02■■□□□ 1.6
MKRN1-216ENST00000498535 RAPGEF5Q92565 580 aa25.02■■□□□ 1.6
MKRN1-216ENST00000498535 PLEKHG4BQ96PX9 1271 aa25.02■■□□□ 1.6
MKRN1-216ENST00000498535 NENFQ9UMX5 172 aa25.02■■□□□ 1.6
MKRN1-216ENST00000498535 SHOC2Q9UQ13 582 aa25.02■■□□□ 1.6
MKRN1-216ENST00000498535 BSNQ9UPA5 3926 aa25.01■■□□□ 1.59
MKRN1-216ENST00000498535 LRRD1A4D1F6 860 aa25.01■■□□□ 1.59
MKRN1-216ENST00000498535 VIPP01282 170 aa25.01■■□□□ 1.59
MKRN1-216ENST00000498535 SLC4A1P02730 911 aa25.01■■□□□ 1.59
MKRN1-216ENST00000498535 CASP14P31944 242 aa25.01■■□□□ 1.59
MKRN1-216ENST00000498535 DCDC1P59894 354 aa25.01■■□□□ 1.59
MKRN1-216ENST00000498535 MC1RQ01726 317 aa25.01■■□□□ 1.59
MKRN1-216ENST00000498535 INSCQ1MX18 579 aa25.01■■□□□ 1.59
MKRN1-216ENST00000498535 ZNF648Q5T619 568 aaPredicted RBP25.01■■□□□ 1.59
MKRN1-216ENST00000498535 PDPK2PQ6A1A2 396 aa25.01■■□□□ 1.59
MKRN1-216ENST00000498535 TIPARPQ7Z3E1 657 aaKnown RBP25.01■■□□□ 1.59
MKRN1-216ENST00000498535 TRAM1L1Q8N609 369 aa25.01■■□□□ 1.59
MKRN1-216ENST00000498535 GPR26Q8NDV2 337 aa25.01■■□□□ 1.59
MKRN1-216ENST00000498535 EID2BQ96D98 161 aa25.01■■□□□ 1.59
MKRN1-216ENST00000498535 MAK16Q9BXY0 300 aaKnown RBP25.01■■□□□ 1.59
MKRN1-216ENST00000498535 GPR63Q9BZJ6 419 aa25.01■■□□□ 1.59
MKRN1-216ENST00000498535 UCK1Q9HA47 277 aa25.01■■□□□ 1.59
MKRN1-216ENST00000498535 MAGEE1Q9HCI5 957 aa25.01■■□□□ 1.59
MKRN1-216ENST00000498535 SYCE3A1L190 88 aa25■■□□□ 1.59
MKRN1-216ENST00000498535 KMOO15229 486 aa25■■□□□ 1.59
MKRN1-216ENST00000498535 ANKRD34CP0C6C1 535 aa25■■□□□ 1.59
MKRN1-216ENST00000498535 XRCC1P18887 633 aaPredicted RBP25■■□□□ 1.59
MKRN1-216ENST00000498535 UBE2IP63279 158 aaKnown RBP25■■□□□ 1.59
MKRN1-216ENST00000498535 FOXM1Q08050 763 aa25■■□□□ 1.59
MKRN1-216ENST00000498535 CDC20Q12834 499 aa25■■□□□ 1.59
MKRN1-216ENST00000498535 MESDQ14696 234 aa25■■□□□ 1.59
MKRN1-216ENST00000498535 SLC18A3Q16572 532 aa25■■□□□ 1.59
MKRN1-216ENST00000498535 CCDC70Q6NSX1 233 aa25■■□□□ 1.59
MKRN1-216ENST00000498535 CRTC3Q6UUV7 619 aa25■■□□□ 1.59
MKRN1-216ENST00000498535 ADGRG6Q86SQ4 1221 aa25■■□□□ 1.59
MKRN1-216ENST00000498535 NT5DC3Q86UY8 548 aa25■■□□□ 1.59
MKRN1-216ENST00000498535 PLD5Q8N7P1 536 aa25■■□□□ 1.59
MKRN1-216ENST00000498535 GLYATL1Q969I3 302 aa25■■□□□ 1.59
MKRN1-216ENST00000498535 IMP4Q96G21 291 aaKnown RBP25■■□□□ 1.59
MKRN1-216ENST00000498535 PACSIN1Q9BY11 444 aa25■■□□□ 1.59
MKRN1-216ENST00000498535 CEP41Q9BYV8 373 aa25■■□□□ 1.59
MKRN1-216ENST00000498535 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25■■□□□ 1.59
MKRN1-216ENST00000498535 ADGRG1Q9Y653 693 aa25■■□□□ 1.59
MKRN1-216ENST00000498535 MN1Q10571 1320 aaPredicted RBP25■■□□□ 1.59
MKRN1-216ENST00000498535 ZNF487B1APH4 448 aa24.99■■□□□ 1.59
MKRN1-216ENST00000498535 UBXN7O94888 489 aa24.99■■□□□ 1.59
MKRN1-216ENST00000498535 PIRTP0C851 137 aa24.99■■□□□ 1.59
MKRN1-216ENST00000498535 AMD1P17707 334 aa24.99■■□□□ 1.59
MKRN1-216ENST00000498535 PDK1Q15118 436 aa24.99■■□□□ 1.59
MKRN1-216ENST00000498535 PCSK7Q16549 785 aa24.99■■□□□ 1.59
MKRN1-216ENST00000498535 PLA2G4EQ3MJ16 856 aa24.99■■□□□ 1.59
MKRN1-216ENST00000498535 TMEM26Q6ZUK4 368 aa24.99■■□□□ 1.59
MKRN1-216ENST00000498535 TMC3Q7Z5M5 1100 aa24.99■■□□□ 1.59
MKRN1-216ENST00000498535 LRRTM4Q86VH4 590 aa24.99■■□□□ 1.59
MKRN1-216ENST00000498535 ESX1Q8N693 406 aa24.99■■□□□ 1.59
MKRN1-216ENST00000498535 C9orf43Q8TAL5 461 aaPredicted RBP24.99■■□□□ 1.59
MKRN1-216ENST00000498535 STARD8Q92502 1023 aa24.99■■□□□ 1.59
MKRN1-216ENST00000498535 C9orf72Q96LT7 481 aa24.99■■□□□ 1.59
MKRN1-216ENST00000498535 AGAP3Q96P47 875 aa24.99■■□□□ 1.59
MKRN1-216ENST00000498535 TRIB3Q96RU7 358 aa24.99■■□□□ 1.59
MKRN1-216ENST00000498535 DEF6Q9H4E7 631 aa24.99■■□□□ 1.59
MKRN1-216ENST00000498535 IFNKQ9P0W0 207 aa24.99■■□□□ 1.59
MKRN1-216ENST00000498535 NFKBIL1Q9UBC1 381 aaPredicted RBP24.99■■□□□ 1.59
MKRN1-216ENST00000498535 DNAJC16Q9Y2G8 782 aa24.99■■□□□ 1.59
MKRN1-216ENST00000498535 ZNF711Q9Y462 761 aa24.99■■□□□ 1.59
MKRN1-216ENST00000498535 PDZK1P1A8MUH7 402 aa24.98■■□□□ 1.59
MKRN1-216ENST00000498535 APOL1O14791 398 aa24.98■■□□□ 1.59
MKRN1-216ENST00000498535 PPP1R12AO14974 1030 aaPredicted RBP24.98■■□□□ 1.59
MKRN1-216ENST00000498535 CHUKO15111 745 aa24.98■■□□□ 1.59
MKRN1-216ENST00000498535 ZNF7P17097 686 aaPredicted RBP24.98■■□□□ 1.59
MKRN1-216ENST00000498535 TYRP1P17643 537 aa24.98■■□□□ 1.59
MKRN1-216ENST00000498535 HNRNPH3P31942 346 aaKnown RBP24.98■■□□□ 1.59
MKRN1-216ENST00000498535 GFERP55789 205 aa24.98■■□□□ 1.59
MKRN1-216ENST00000498535 CDK18Q07002 472 aa24.98■■□□□ 1.59
MKRN1-216ENST00000498535 ODF2Q5BJF6 829 aa24.98■■□□□ 1.59
MKRN1-216ENST00000498535 APOBEC4Q8WW27 367 aaKnown RBP24.98■■□□□ 1.59
MKRN1-216ENST00000498535 SRPK1Q96SB4 655 aaKnown RBP24.98■■□□□ 1.59
MKRN1-216ENST00000498535 ULBP3Q9BZM4 244 aa24.98■■□□□ 1.59
MKRN1-216ENST00000498535 SLC25A51Q9H1U9 297 aa24.98■■□□□ 1.59
MKRN1-216ENST00000498535 SCHIP1Q9P0W5 487 aaPredicted RBP24.98■■□□□ 1.59
MKRN1-216ENST00000498535 SLC23A2Q9UGH3 650 aa24.98■■□□□ 1.59
MKRN1-216ENST00000498535 NBASA2RRP1 2371 aa24.97■■□□□ 1.59
MKRN1-216ENST00000498535 VEGFDO43915 354 aa24.97■■□□□ 1.59
MKRN1-216ENST00000498535 DLGAP3O95886 979 aa24.97■■□□□ 1.59
MKRN1-216ENST00000498535 C9P02748 559 aa24.97■■□□□ 1.59
MKRN1-216ENST00000498535 TPM3P06753 285 aa24.97■■□□□ 1.59
MKRN1-216ENST00000498535 ZFXP17010 805 aaPredicted RBP24.97■■□□□ 1.59
MKRN1-216ENST00000498535 TCN2P20062 427 aa24.97■■□□□ 1.59
MKRN1-216ENST00000498535 STAT5AP42229 794 aa24.97■■□□□ 1.59
MKRN1-216ENST00000498535 MAP7Q14244 749 aa24.97■■□□□ 1.59
MKRN1-216ENST00000498535 SEPT7Q16181 437 aaKnown RBP24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms