RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 ANKFN1Q8N957 763 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 PANK1Q8TE04 598 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 NR4A3Q92570 626 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 PYCR2Q96C36 320 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 AHCYL2Q96HN2 611 aaKnown RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 ZNF714Q96N38 554 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ZNF285Q96NJ3 590 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 GSDMAQ96QA5 445 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 KATNB1Q9BVA0 655 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 GPR87Q9BY21 358 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 MRPS26Q9BYN8 205 aaKnown RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 NACA2Q9H009 215 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 NDST4Q9H3R1 872 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ZNF556Q9HAH1 456 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 APOBEC3GQ9HC16 384 aaKnown RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 TIGARQ9NQ88 270 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 VSIG4Q9Y279 399 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 SPEF1Q9Y4P9 236 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ANKARQ7Z5J8 1434 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 PCSK5Q92824 1860 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 UBA6A0AVT1 1052 aaPredicted RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 PQLC2LA1A4F0 135 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 LRRIQ4A6NIV6 560 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 SLC22A20A6NK97 555 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 FAM170BA6NMN3 283 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 CENPBD1B2RD01 187 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 CHUKO15111 745 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 MSI1O43347 362 aaKnown RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 BUB1O43683 1085 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 LRIG2O94898 1065 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 BMP10O95393 424 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 PGM3O95394 542 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ZSCAN5DPP0CG00 497 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 MYL4P12829 197 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 GABRA1P14867 456 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 SELPP16109 830 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 GPD1P21695 349 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 SERPINB8P50452 374 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ZNF81P51508 661 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 EPHA4P54764 986 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 PPARAQ07869 468 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 BST1Q10588 318 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 EPS8Q12929 822 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ASAH1Q13510 395 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 STARD3Q14849 445 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 CCDC57Q2TAC2 916 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ZNF672Q499Z4 452 aaPredicted RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 EARS2Q5JPH6 523 aaKnown RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 COX20Q5RI15 118 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 EGFLAMQ63HQ2 1017 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 TTBK2Q6IQ55 1244 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 KIAA1211LQ6NV74 962 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 LLGL2Q6P1M3 1020 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 VITQ6UXI7 678 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ZNF497Q6ZNH5 498 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 PIK3AP1Q6ZUJ8 805 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 KCTD8Q6ZWB6 473 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 PDZD4Q76G19 769 aaPredicted RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 CXXC5Q7LFL8 322 aaKnown RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 SLC46A3Q7Z3Q1 461 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 RTN4RL1Q86UN2 441 aaPredicted RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 NLRX1Q86UT6 975 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ARHGEF19Q8IW93 802 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 DIS3L2Q8IYB7 885 aaKnown RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 BATF2Q8N1L9 274 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 BMPERQ8N8U9 685 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 PROKR1Q8TCW9 393 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 PLEKHO2Q8TD55 490 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 GRHL3Q8TE85 626 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 DTD1Q8TEA8 209 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ASZ1Q8WWH4 475 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 RELTQ969Z4 430 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 NUDT16Q96DE0 195 aaKnown RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 HSPBAP1Q96EW2 488 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 TMA16Q96EY4 203 aaKnown RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 RCC1LQ96I51 464 aaKnown RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 MTMR9Q96QG7 549 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 LMF1Q96S06 567 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 SRPK1Q96SB4 655 aaKnown RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 CPXM1Q96SM3 734 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 PI4K2AQ9BTU6 479 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 NUP85Q9BW27 656 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 SPZ1Q9BXG8 430 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 SLC13A1Q9BZW2 595 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 KRT23Q9C075 422 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 TKTL2Q9H0I9 626 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 DDX47Q9H0S4 455 aaKnown RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 C11orf49Q9H6J7 331 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 PREBQ9HCU5 417 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 RRP7BPQ9NSQ0 103 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 CPNE7Q9UBL6 633 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 LCMT1Q9UIC8 334 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 PCDHB12Q9Y5F1 795 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 A0A1W2PP55 124 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 SLC5A10A0PJK1 596 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 LRRD1A4D1F6 860 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 TMEM191CA6NGB0 347 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ERICH4A6NGS2 130 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 C3orf70A6NLC5 250 aaPredicted RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 O00370 1275 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms