RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 TRAM1L1Q8N609 369 aa16.94■□□□□ 0.3
SMC4-226ENST00000497311 TEFMQ96QE5 360 aaKnown RBP16.94■□□□□ 0.3
SMC4-226ENST00000497311 FAM117AQ9C073 453 aa16.94■□□□□ 0.3
SMC4-226ENST00000497311 PRDM8Q9NQV8 689 aa16.94■□□□□ 0.3
SMC4-226ENST00000497311 KLC4Q9NSK0 619 aa16.94■□□□□ 0.3
SMC4-226ENST00000497311 CPNE7Q9UBL6 633 aa16.94■□□□□ 0.3
SMC4-226ENST00000497311 ZNF711Q9Y462 761 aa16.94■□□□□ 0.3
SMC4-226ENST00000497311 HEMK1Q9Y5R4 338 aaPredicted RBP16.94■□□□□ 0.3
SMC4-226ENST00000497311 FLNBO75369 2602 aaKnown RBP16.94■□□□□ 0.3
SMC4-226ENST00000497311 MFAP3LO75121 409 aa16.93■□□□□ 0.3
SMC4-226ENST00000497311 FAM87AP0C7U9 286 aa16.93■□□□□ 0.3
SMC4-226ENST00000497311 MAPK9P45984 424 aa16.93■□□□□ 0.3
SMC4-226ENST00000497311 B4GALNT4Q76KP1 1039 aa16.93■□□□□ 0.3
SMC4-226ENST00000497311 BZW1Q7L1Q6 419 aaKnown RBP16.93■□□□□ 0.3
SMC4-226ENST00000497311 ADGRG6Q86SQ4 1221 aa16.93■□□□□ 0.3
SMC4-226ENST00000497311 VSTM4Q8IW00 320 aa16.93■□□□□ 0.3
SMC4-226ENST00000497311 BMPERQ8N8U9 685 aa16.93■□□□□ 0.3
SMC4-226ENST00000497311 SPATA22Q8NHS9 363 aa16.93■□□□□ 0.3
SMC4-226ENST00000497311 HTR3CQ8WXA8 447 aa16.93■□□□□ 0.3
SMC4-226ENST00000497311 GLYATL1Q969I3 302 aa16.93■□□□□ 0.3
SMC4-226ENST00000497311 TADA1Q96BN2 335 aa16.93■□□□□ 0.3
SMC4-226ENST00000497311 SRPK1Q96SB4 655 aaKnown RBP16.93■□□□□ 0.3
SMC4-226ENST00000497311 SLC12A9Q9BXP2 914 aa16.93■□□□□ 0.3
SMC4-226ENST00000497311 TSPY26PQ9H489 355 aa16.93■□□□□ 0.3
SMC4-226ENST00000497311 OSGEPL1Q9H4B0 414 aa16.93■□□□□ 0.3
SMC4-226ENST00000497311 EPB41L1Q9H4G0 881 aa16.93■□□□□ 0.3
SMC4-226ENST00000497311 GLOD4Q9HC38 313 aa16.93■□□□□ 0.3
SMC4-226ENST00000497311 NFKBIL1Q9UBC1 381 aaPredicted RBP16.93■□□□□ 0.3
SMC4-226ENST00000497311 ADGRG1Q9Y653 693 aa16.93■□□□□ 0.3
SMC4-226ENST00000497311 A0A0A6YYK5 440 aaPredicted RBP16.92■□□□□ 0.3
SMC4-226ENST00000497311 RAD1O60671 282 aa16.92■□□□□ 0.3
SMC4-226ENST00000497311 NDST3O95803 873 aa16.92■□□□□ 0.3
SMC4-226ENST00000497311 MT-CYBP00156 380 aaPredicted RBP16.92■□□□□ 0.3
SMC4-226ENST00000497311 NR2C2P49116 596 aa16.92■□□□□ 0.3
SMC4-226ENST00000497311 MC2RQ01718 297 aa16.92■□□□□ 0.3
SMC4-226ENST00000497311 INSCQ1MX18 579 aa16.92■□□□□ 0.3
SMC4-226ENST00000497311 CRTC3Q6UUV7 619 aa16.92■□□□□ 0.3
SMC4-226ENST00000497311 MFSD7Q6UXD7 560 aa16.92■□□□□ 0.3
SMC4-226ENST00000497311 CEACAM20Q6UY09 585 aa16.92■□□□□ 0.3
SMC4-226ENST00000497311 PRICKLE2Q7Z3G6 844 aa16.92■□□□□ 0.3
SMC4-226ENST00000497311 RTP4Q96DX8 246 aa16.92■□□□□ 0.3
SMC4-226ENST00000497311 PLEKHG4BQ96PX9 1271 aa16.92■□□□□ 0.3
SMC4-226ENST00000497311 ZPBPQ9BS86 351 aa16.92■□□□□ 0.3
SMC4-226ENST00000497311 TBC1D10AQ9BXI6 508 aa16.92■□□□□ 0.3
SMC4-226ENST00000497311 STARD5Q9NSY2 213 aa16.92■□□□□ 0.3
SMC4-226ENST00000497311 KLHL3Q9UH77 587 aa16.92■□□□□ 0.3
SMC4-226ENST00000497311 INTUQ9ULD6 942 aa16.92■□□□□ 0.3
SMC4-226ENST00000497311 LILRA5A6NI73 299 aa16.91■□□□□ 0.3
SMC4-226ENST00000497311 CHUKO15111 745 aa16.91■□□□□ 0.3
SMC4-226ENST00000497311 KMOO15229 486 aa16.91■□□□□ 0.3
SMC4-226ENST00000497311 SPOPO43791 374 aa16.91■□□□□ 0.3
SMC4-226ENST00000497311 VEGFDO43915 354 aa16.91■□□□□ 0.3
SMC4-226ENST00000497311 PMPCBO75439 489 aa16.91■□□□□ 0.3
SMC4-226ENST00000497311 LIFP15018 202 aa16.91■□□□□ 0.3
SMC4-226ENST00000497311 BPIP17213 487 aa16.91■□□□□ 0.3
SMC4-226ENST00000497311 XRCC1P18887 633 aaPredicted RBP16.91■□□□□ 0.3
SMC4-226ENST00000497311 PTPN3P26045 913 aa16.91■□□□□ 0.3
SMC4-226ENST00000497311 UBE2IP63279 158 aaKnown RBP16.91■□□□□ 0.3
SMC4-226ENST00000497311 PLA2G4EQ3MJ16 856 aa16.91■□□□□ 0.3
SMC4-226ENST00000497311 LRRTM4Q86VH4 590 aa16.91■□□□□ 0.3
SMC4-226ENST00000497311 PLXDC1Q8IUK5 500 aa16.91■□□□□ 0.3
SMC4-226ENST00000497311 TRIM48Q8IWZ4 208 aa16.91■□□□□ 0.3
SMC4-226ENST00000497311 TEKT5Q96M29 485 aa16.91■□□□□ 0.3
SMC4-226ENST00000497311 CTRCQ99895 268 aa16.91■□□□□ 0.3
SMC4-226ENST00000497311 UCK1Q9HA47 277 aa16.91■□□□□ 0.3
SMC4-226ENST00000497311 FBXO8Q9NRD0 319 aa16.91■□□□□ 0.3
SMC4-226ENST00000497311 UBP1Q9NZI7 540 aa16.91■□□□□ 0.3
SMC4-226ENST00000497311 SLC23A2Q9UGH3 650 aa16.91■□□□□ 0.3
SMC4-226ENST00000497311 PILRAQ9UKJ1 303 aa16.91■□□□□ 0.3
SMC4-226ENST00000497311 HYOU1Q9Y4L1 999 aa16.91■□□□□ 0.3
SMC4-226ENST00000497311 SPTA1P02549 2419 aa16.91■□□□□ 0.3
SMC4-226ENST00000497311 TENM4Q6N022 2769 aa16.9■□□□□ 0.3
SMC4-226ENST00000497311 SETXQ7Z333 2677 aaKnown RBP16.9■□□□□ 0.3
SMC4-226ENST00000497311 BSNQ9UPA5 3926 aa16.9■□□□□ 0.3
SMC4-226ENST00000497311 MTX2O75431 263 aa16.9■□□□□ 0.3
SMC4-226ENST00000497311 CDK14O94921 469 aa16.9■□□□□ 0.3
SMC4-226ENST00000497311 VIPP01282 170 aa16.9■□□□□ 0.3
SMC4-226ENST00000497311 ZNF7P17097 686 aaPredicted RBP16.9■□□□□ 0.3
SMC4-226ENST00000497311 ITGB6P18564 788 aa16.9■□□□□ 0.3
SMC4-226ENST00000497311 COMTP21964 271 aa16.9■□□□□ 0.3
SMC4-226ENST00000497311 MAP4P27816 1152 aaKnown RBP16.9■□□□□ 0.3
SMC4-226ENST00000497311 NOP2P46087 812 aaKnown RBP16.9■□□□□ 0.3
SMC4-226ENST00000497311 TFDP2Q14188 446 aa16.9■□□□□ 0.3
SMC4-226ENST00000497311 PRKD1Q15139 912 aaPredicted RBP16.9■□□□□ 0.3
SMC4-226ENST00000497311 TCEAL1Q15170 157 aa16.9■□□□□ 0.3
SMC4-226ENST00000497311 CNGA4Q8IV77 575 aa16.9■□□□□ 0.3
SMC4-226ENST00000497311 NLGN4XQ8N0W4 816 aa16.9■□□□□ 0.3
SMC4-226ENST00000497311 NLGN4YQ8NFZ3 816 aaPredicted RBP16.9■□□□□ 0.3
SMC4-226ENST00000497311 TFB1MQ8WVM0 346 aaKnown RBP16.9■□□□□ 0.3
SMC4-226ENST00000497311 TIMM29Q9BSF4 260 aa16.9■□□□□ 0.3
SMC4-226ENST00000497311 SPRY4Q9C004 299 aa16.9■□□□□ 0.3
SMC4-226ENST00000497311 SCHIP1Q9P0W5 487 aaPredicted RBP16.9■□□□□ 0.3
SMC4-226ENST00000497311 SAE1Q9UBE0 346 aaPredicted RBP16.9■□□□□ 0.3
SMC4-226ENST00000497311 FAM153AQ9UHL3 310 aa16.9■□□□□ 0.3
SMC4-226ENST00000497311 DNAJC16Q9Y2G8 782 aa16.9■□□□□ 0.3
SMC4-226ENST00000497311 BOD1L1Q8NFC6 3051 aa16.9■□□□□ 0.3
SMC4-226ENST00000497311 PDZK1P1A8MUH7 402 aa16.89■□□□□ 0.29
SMC4-226ENST00000497311 PYCARD-AS1I3L0S3 204 aa16.89■□□□□ 0.29
SMC4-226ENST00000497311 AURKAO14965 403 aa16.89■□□□□ 0.29
SMC4-226ENST00000497311 POLR1CO15160 346 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms