RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 C6orf132Q5T0Z8 1188 aa13.39□□□□□ -0.27
COL1A1-208ENST00000494334 RNASEH2BQ5TBB1 312 aaKnown RBP13.39□□□□□ -0.27
COL1A1-208ENST00000494334 N4BP2L1Q5TBK1 243 aaPredicted RBP13.39□□□□□ -0.27
COL1A1-208ENST00000494334 ZCCHC8Q6NZY4 707 aaKnown RBP13.39□□□□□ -0.27
COL1A1-208ENST00000494334 SNX20Q7Z614 316 aa13.39□□□□□ -0.27
COL1A1-208ENST00000494334 SLCO6A1Q86UG4 719 aa13.39□□□□□ -0.27
COL1A1-208ENST00000494334 PPIL6Q8IXY8 311 aa13.39□□□□□ -0.27
COL1A1-208ENST00000494334 PPHLN1Q8NEY8 458 aaKnown RBP13.39□□□□□ -0.27
COL1A1-208ENST00000494334 SCG3Q8WXD2 468 aaKnown RBP13.39□□□□□ -0.27
COL1A1-208ENST00000494334 ZNF592Q92610 1267 aa13.39□□□□□ -0.27
COL1A1-208ENST00000494334 BOCQ9BWV1 1114 aa13.39□□□□□ -0.27
COL1A1-208ENST00000494334 GSDMCQ9BYG8 508 aa13.39□□□□□ -0.27
COL1A1-208ENST00000494334 FAM96AQ9H5X1 160 aa13.39□□□□□ -0.27
COL1A1-208ENST00000494334 CRLS1Q9UJA2 301 aa13.39□□□□□ -0.27
COL1A1-208ENST00000494334 CDC23Q9UJX2 597 aa13.39□□□□□ -0.27
COL1A1-208ENST00000494334 SLC30A1Q9Y6M5 507 aa13.39□□□□□ -0.27
COL1A1-208ENST00000494334 U3KQA8 63 aa13.39□□□□□ -0.27
COL1A1-208ENST00000494334 SCN8AQ9UQD0 1980 aa13.39□□□□□ -0.27
COL1A1-208ENST00000494334 GOLGA8MH3BSY2 632 aa13.38□□□□□ -0.27
COL1A1-208ENST00000494334 KIF2AO00139 706 aaPredicted RBP13.38□□□□□ -0.27
COL1A1-208ENST00000494334 FTH1P19P0C7X4 201 aa13.38□□□□□ -0.27
COL1A1-208ENST00000494334 PRSS56P0CW18 603 aa13.38□□□□□ -0.27
COL1A1-208ENST00000494334 MLNP12872 115 aa13.38□□□□□ -0.27
COL1A1-208ENST00000494334 ITGALP20701 1170 aa13.38□□□□□ -0.27
COL1A1-208ENST00000494334 CDKN1CP49918 316 aaPredicted RBP13.38□□□□□ -0.27
COL1A1-208ENST00000494334 C2orf54Q08AI8 447 aa13.38□□□□□ -0.27
COL1A1-208ENST00000494334 ZRANB3Q5FWF4 1079 aa13.38□□□□□ -0.27
COL1A1-208ENST00000494334 OGFOD3Q6PK18 319 aa13.38□□□□□ -0.27
COL1A1-208ENST00000494334 CHST15Q7LFX5 561 aaPredicted RBP13.38□□□□□ -0.27
COL1A1-208ENST00000494334 NLRP9Q7RTR0 991 aa13.38□□□□□ -0.27
COL1A1-208ENST00000494334 ZNF572Q7Z3I7 529 aaPredicted RBP13.38□□□□□ -0.27
COL1A1-208ENST00000494334 ZNF547Q8IVP9 402 aa13.38□□□□□ -0.27
COL1A1-208ENST00000494334 FAM46DQ8NEK8 389 aa13.38□□□□□ -0.27
COL1A1-208ENST00000494334 PEX13Q92968 403 aa13.38□□□□□ -0.27
COL1A1-208ENST00000494334 HDAC10Q969S8 669 aa13.38□□□□□ -0.27
COL1A1-208ENST00000494334 TTC25Q96NG3 672 aa13.38□□□□□ -0.27
COL1A1-208ENST00000494334 SERPINB12Q96P63 405 aa13.38□□□□□ -0.27
COL1A1-208ENST00000494334 TRIM51Q9BSJ1 452 aa13.38□□□□□ -0.27
COL1A1-208ENST00000494334 SPATS2LQ9NUQ6 558 aaKnown RBP13.38□□□□□ -0.27
COL1A1-208ENST00000494334 SYBUQ9NX95 663 aa13.38□□□□□ -0.27
COL1A1-208ENST00000494334 GPR34Q9UPC5 381 aa13.38□□□□□ -0.27
COL1A1-208ENST00000494334 CNOT1A5YKK6 2376 aaKnown RBP13.38□□□□□ -0.27
COL1A1-208ENST00000494334 LRP4O75096 1905 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 TRBV5-4A0A0C4DH59 114 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 CCDC162PA2VCL2 907 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 OR51F1A6NGY5 319 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 DKK1O94907 266 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 GOT2P00505 430 aaKnown RBP13.37□□□□□ -0.27
COL1A1-208ENST00000494334 CKMT1AP12532 417 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 MSH3P20585 1137 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 ACP1P24666 158 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 FOXN2P32314 431 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 ACTR1BP42025 376 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 ACADVLP49748 655 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 CTSCP53634 463 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 ACTR1AP61163 376 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 MRPS25P82663 173 aaKnown RBP13.37□□□□□ -0.27
COL1A1-208ENST00000494334 DAB2P98082 770 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 CACNG1Q06432 222 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 GTF2H3Q13889 308 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 LRP8Q14114 963 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 GPR33Q49SQ1 333 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 IZUMO3Q5VZ72 239 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 SLC30A9Q6PML9 568 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 CRTC3Q6UUV7 619 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 PCGF5Q86SE9 256 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 LRRTM4Q86VH4 590 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 SFTPA2Q8IWL1 248 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 SLC35F3Q8IY50 421 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 NXPE1Q8N323 547 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 MPP5Q8N3R9 675 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 PNPLA1Q8N8W4 532 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 RASGEF1AQ8N9B8 481 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 ULK4Q96C45 1275 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 KIFC1Q9BW19 673 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 DPEP2Q9H4A9 486 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 MRM3Q9HC36 420 aaKnown RBP13.37□□□□□ -0.27
COL1A1-208ENST00000494334 XAB2Q9HCS7 855 aaKnown RBP13.37□□□□□ -0.27
COL1A1-208ENST00000494334 TREX1Q9NSU2 369 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 TAAR2Q9P1P5 351 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 SIRPGQ9P1W8 387 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 GULP1Q9UBP9 304 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 SLC23A2Q9UGH3 650 aa13.37□□□□□ -0.27
COL1A1-208ENST00000494334 COL5A1P20908 1838 aaPredicted RBP13.36□□□□□ -0.27
COL1A1-208ENST00000494334 EME2A4GXA9 379 aaPredicted RBP13.36□□□□□ -0.27
COL1A1-208ENST00000494334 KMOO15229 486 aa13.36□□□□□ -0.27
COL1A1-208ENST00000494334 NOBOXO60393 691 aa13.36□□□□□ -0.27
COL1A1-208ENST00000494334 ACP5P13686 325 aa13.36□□□□□ -0.27
COL1A1-208ENST00000494334 ACRV1P26436 265 aa13.36□□□□□ -0.27
COL1A1-208ENST00000494334 NMBRP28336 390 aa13.36□□□□□ -0.27
COL1A1-208ENST00000494334 MAGEA3P43357 314 aa13.36□□□□□ -0.27
COL1A1-208ENST00000494334 DUSP3P51452 185 aaPredicted RBP13.36□□□□□ -0.27
COL1A1-208ENST00000494334 B4GALNT1Q00973 533 aa13.36□□□□□ -0.27
COL1A1-208ENST00000494334 CKAP4Q07065 602 aaKnown RBP13.36□□□□□ -0.27
COL1A1-208ENST00000494334 NR0B2Q15466 257 aa13.36□□□□□ -0.27
COL1A1-208ENST00000494334 TMEM220Q6QAJ8 160 aa13.36□□□□□ -0.27
COL1A1-208ENST00000494334 CES3Q6UWW8 571 aa13.36□□□□□ -0.27
COL1A1-208ENST00000494334 TAS2R42Q7RTR8 314 aa13.36□□□□□ -0.27
COL1A1-208ENST00000494334 ERMP1Q7Z2K6 904 aa13.36□□□□□ -0.27
COL1A1-208ENST00000494334 MAATS1Q7Z4T9 603 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms