RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 RD3Q7Z3Z2 195 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 KCNMB4Q86W47 210 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 PIANPQ8IYJ0 282 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 GSDMBQ8TAX9 411 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 CALML6Q8TD86 181 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 HEXDCQ8WVB3 486 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 CERS2Q96G23 380 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 CYP4F12Q9HCS2 524 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 FGF22Q9HCT0 170 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 ZDHHC3Q9NYG2 299 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 VPS18Q9P253 973 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.41□□□□□ -0.1
BRCA1-223ENST00000494123 OAS3Q9Y6K5 1087 aaKnown RBP14.41□□□□□ -0.1
BRCA1-223ENST00000494123 PRSS38A1L453 326 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 H3BM21 787 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 TNFRSF10CO14798 259 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 PFDN6O15212 129 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 VEGFDO43915 354 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 CDK14O94921 469 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 RASGRP1O95267 797 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 CER1O95813 267 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 CEACAM5P06731 702 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 MCM3P25205 808 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 TNFRSF8P28908 595 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 CA5AP35218 305 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 POLD2P49005 469 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 ARRB1P49407 418 aaPredicted RBP14.41□□□□□ -0.1
BRCA1-223ENST00000494123 TTPAP49638 278 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 TMEM115Q12893 351 aaPredicted RBP14.41□□□□□ -0.1
BRCA1-223ENST00000494123 SLMAPQ14BN4 828 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 SF3A2Q15428 464 aaKnown RBP14.41□□□□□ -0.1
BRCA1-223ENST00000494123 HLA-BQ31612 363 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 HSP90AA5PQ58FG0 334 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 STEAP4Q687X5 459 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 ADGRG6Q86SQ4 1221 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 HID1Q8IV36 788 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 DCLK2Q8N568 766 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 EIF1ADQ8N9N8 165 aaKnown RBP14.41□□□□□ -0.1
BRCA1-223ENST00000494123 TMEM131Q92545 1883 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 TSACCQ96A04 125 aaPredicted RBP14.41□□□□□ -0.1
BRCA1-223ENST00000494123 PDXPQ96GD0 296 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 ELF4Q99607 663 aaPredicted RBP14.41□□□□□ -0.1
BRCA1-223ENST00000494123 FAM167BQ9BTA0 163 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 ERVMER34-1Q9H9K5 563 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 MRPL40Q9NQ50 206 aaKnown RBP14.41□□□□□ -0.1
BRCA1-223ENST00000494123 ATXN10Q9UBB4 475 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 SLC17A4Q9Y2C5 497 aa14.41□□□□□ -0.1
BRCA1-223ENST00000494123 MYO15AQ9UKN7 3530 aa14.4□□□□□ -0.1
BRCA1-223ENST00000494123 PCDH15Q96QU1 1955 aa14.4□□□□□ -0.1
BRCA1-223ENST00000494123 TNFP01375 233 aa14.4□□□□□ -0.1
BRCA1-223ENST00000494123 GSTA2P09210 222 aa14.4□□□□□ -0.1
BRCA1-223ENST00000494123 ERVK-10P10266 1014 aa14.4□□□□□ -0.1
BRCA1-223ENST00000494123 SSTR1P30872 391 aa14.4□□□□□ -0.1
BRCA1-223ENST00000494123 EIF2B5Q13144 721 aaKnown RBP14.4□□□□□ -0.1
BRCA1-223ENST00000494123 SEMA3AQ14563 771 aa14.4□□□□□ -0.1
BRCA1-223ENST00000494123 ITIH4Q14624 930 aa14.4□□□□□ -0.1
BRCA1-223ENST00000494123 DBN1Q16643 649 aa14.4□□□□□ -0.1
BRCA1-223ENST00000494123 ALG11Q2TAA5 492 aa14.4□□□□□ -0.1
BRCA1-223ENST00000494123 KHDC1Q4VXA5 237 aaKnown RBP14.4□□□□□ -0.1
BRCA1-223ENST00000494123 PRAMEF14Q5SWL7 426 aa14.4□□□□□ -0.1
BRCA1-223ENST00000494123 ZNF470Q6ECI4 717 aa14.4□□□□□ -0.1
BRCA1-223ENST00000494123 ASCL5Q7RTU5 278 aa14.4□□□□□ -0.1
BRCA1-223ENST00000494123 LDB1Q86U70 411 aaPredicted RBP14.4□□□□□ -0.1
BRCA1-223ENST00000494123 GALNT13Q8IUC8 556 aa14.4□□□□□ -0.1
BRCA1-223ENST00000494123 LMNTD2Q8IXW0 634 aa14.4□□□□□ -0.1
BRCA1-223ENST00000494123 GSPT2Q8IYD1 628 aaKnown RBP14.4□□□□□ -0.1
BRCA1-223ENST00000494123 PHACTR4Q8IZ21 702 aa14.4□□□□□ -0.1
BRCA1-223ENST00000494123 UNC5BQ8IZJ1 945 aa14.4□□□□□ -0.1
BRCA1-223ENST00000494123 GPR150Q8NGU9 434 aa14.4□□□□□ -0.1
BRCA1-223ENST00000494123 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.4□□□□□ -0.1
BRCA1-223ENST00000494123 OR1E3Q8WZA6 343 aa14.4□□□□□ -0.1
BRCA1-223ENST00000494123 SLC13A1Q9BZW2 595 aa14.4□□□□□ -0.1
BRCA1-223ENST00000494123 GAREM1Q9H706 876 aa14.4□□□□□ -0.1
BRCA1-223ENST00000494123 RMI1Q9H9A7 625 aa14.4□□□□□ -0.1
BRCA1-223ENST00000494123 VPS37BQ9H9H4 285 aa14.4□□□□□ -0.1
BRCA1-223ENST00000494123 CARS2Q9HA77 564 aaKnown RBP14.4□□□□□ -0.1
BRCA1-223ENST00000494123 IARS2Q9NSE4 1012 aaKnown RBP14.4□□□□□ -0.1
BRCA1-223ENST00000494123 MARCH4Q9P2E8 410 aaPredicted RBP14.4□□□□□ -0.1
BRCA1-223ENST00000494123 ZNHIT2Q9UHR6 403 aa14.4□□□□□ -0.1
BRCA1-223ENST00000494123 SUFUQ9UMX1 484 aa14.4□□□□□ -0.1
BRCA1-223ENST00000494123 LRP4O75096 1905 aa14.39□□□□□ -0.11
BRCA1-223ENST00000494123 LNP1A1A4G5 178 aa14.39□□□□□ -0.11
BRCA1-223ENST00000494123 GPR89AB7ZAQ6 455 aa14.39□□□□□ -0.11
BRCA1-223ENST00000494123 NUAK1O60285 661 aa14.39□□□□□ -0.11
BRCA1-223ENST00000494123 DFNA5O60443 496 aa14.39□□□□□ -0.11
BRCA1-223ENST00000494123 FOXD2O60548 495 aaPredicted RBP14.39□□□□□ -0.11
BRCA1-223ENST00000494123 NDUFS3O75489 264 aa14.39□□□□□ -0.11
BRCA1-223ENST00000494123 SPAG6O75602 509 aa14.39□□□□□ -0.11
BRCA1-223ENST00000494123 CSF2P04141 144 aa14.39□□□□□ -0.11
BRCA1-223ENST00000494123 GPR89BP0CG08 455 aa14.39□□□□□ -0.11
BRCA1-223ENST00000494123 NME1P15531 152 aaKnown RBP14.39□□□□□ -0.11
BRCA1-223ENST00000494123 ZNF8P17098 575 aaPredicted RBP14.39□□□□□ -0.11
BRCA1-223ENST00000494123 JUNDP17535 347 aa14.39□□□□□ -0.11
BRCA1-223ENST00000494123 OGNP20774 298 aaKnown RBP14.39□□□□□ -0.11
BRCA1-223ENST00000494123 GNPDA1P46926 289 aa14.39□□□□□ -0.11
BRCA1-223ENST00000494123 HK3P52790 923 aa14.39□□□□□ -0.11
BRCA1-223ENST00000494123 ZNF423Q2M1K9 1284 aa14.39□□□□□ -0.11
BRCA1-223ENST00000494123 RNF187Q5TA31 235 aaPredicted RBP14.39□□□□□ -0.11
BRCA1-223ENST00000494123 C3orf62Q6ZUJ4 267 aa14.39□□□□□ -0.11
BRCA1-223ENST00000494123 DET1Q7L5Y6 550 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms