RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 SERPINA4P29622 427 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 HMGCLP35914 325 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 PTGER3P43115 390 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 POLR2LP62875 67 aaKnown RBP9.98□□□□□ -0.81
PRPF3-206ENST00000493553 PFKPQ01813 784 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 CACNG1Q06432 222 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 SF3A3Q12874 501 aaKnown RBP eCLIP9.98□□□□□ -0.81
PRPF3-206ENST00000493553 GPR33Q49SQ1 333 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 FAM182AQ5T1J6 154 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 SEL1L3Q68CR1 1132 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 CNSTQ6PJW8 725 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 GAREM2Q75VX8 874 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 C16orf59Q7L2K0 433 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 EFL1Q7Z2Z2 1120 aaKnown RBP9.98□□□□□ -0.81
PRPF3-206ENST00000493553 PCDH20Q8N6Y1 951 aaKnown RBP9.98□□□□□ -0.81
PRPF3-206ENST00000493553 PAF1Q8N7H5 531 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 MAB21L3Q8N8X9 362 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 LPCAT1Q8NF37 534 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 STAG3L4Q8TBR4 150 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 HEXDCQ8WVB3 486 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 AUTS2Q8WXX7 1259 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 MCUR1Q96AQ8 359 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 MYEOVQ96EZ4 313 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 ALG14Q96F25 216 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 DNAJC1Q96KC8 554 aaKnown RBP9.98□□□□□ -0.81
PRPF3-206ENST00000493553 ZNF641Q96N77 438 aaPredicted RBP9.98□□□□□ -0.81
PRPF3-206ENST00000493553 ANKRD27Q96NW4 1050 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 GPR78Q96P69 363 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 GATA5Q9BWX5 397 aaPredicted RBP9.98□□□□□ -0.81
PRPF3-206ENST00000493553 GPR63Q9BZJ6 419 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 TFB2MQ9H5Q4 396 aaKnown RBP9.98□□□□□ -0.81
PRPF3-206ENST00000493553 CAB39LQ9H9S4 337 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 FBXO6Q9NRD1 293 aaPredicted RBP9.98□□□□□ -0.81
PRPF3-206ENST00000493553 RAD18Q9NS91 495 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 SLC25A13Q9UJS0 675 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 SLC30A1Q9Y6M5 507 aa9.98□□□□□ -0.81
PRPF3-206ENST00000493553 CCDC78A2IDD5 438 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 C2orf71A6NGG8 1288 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 LEFTY2O00292 366 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 MATN2O00339 956 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 HTRA2O43464 458 aaPredicted RBP9.97□□□□□ -0.81
PRPF3-206ENST00000493553 PGLSO95336 258 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 TGFB1P01137 390 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 PRLP01236 227 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 CCDC166P0CW27 439 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 CCND1P24385 295 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 ITGB8P26012 769 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 NNMTP40261 264 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 CSKP41240 450 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 ARF5P84085 180 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 IRF9Q00978 393 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 CDC16Q13042 620 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 GALNT3Q14435 633 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 DLG2Q15700 870 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 PLEKHG6Q3KR16 790 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.97□□□□□ -0.81
PRPF3-206ENST00000493553 TECRLQ5HYJ1 363 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 TMEM240Q5SV17 173 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 GPR158Q5T848 1215 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 GRAMD4Q6IC98 578 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 EPGNQ6UW88 154 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 ZCCHC23Q6ZST2 131 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 CEP97Q8IW35 865 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 CMTM8Q8IZV2 173 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 PLD6Q8N2A8 252 aaKnown RBP9.97□□□□□ -0.81
PRPF3-206ENST00000493553 CBARPQ8N350 705 aaPredicted RBP9.97□□□□□ -0.81
PRPF3-206ENST00000493553 OR4K2Q8NGD2 314 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 MICAL1Q8TDZ2 1067 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 EZH1Q92800 747 aaPredicted RBP9.97□□□□□ -0.81
PRPF3-206ENST00000493553 NXNL1Q96CM4 212 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 PTCD3Q96EY7 689 aaKnown RBP9.97□□□□□ -0.81
PRPF3-206ENST00000493553 THOC1Q96FV9 657 aaKnown RBP9.97□□□□□ -0.81
PRPF3-206ENST00000493553 CYP2S1Q96SQ9 504 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 SORT1Q99523 831 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 LBHD1Q9BQE6 289 aaPredicted RBP9.97□□□□□ -0.81
PRPF3-206ENST00000493553 AARSD1Q9BTE6 412 aaKnown RBP9.97□□□□□ -0.81
PRPF3-206ENST00000493553 YIPF2Q9BWQ6 316 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 CPEB1Q9BZB8 566 aaKnown RBP9.97□□□□□ -0.81
PRPF3-206ENST00000493553 DERL2Q9GZP9 239 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 IGSF5Q9NSI5 407 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 TDP1Q9NUW8 608 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 CPSF2Q9P2I0 782 aaKnown RBP9.97□□□□□ -0.81
PRPF3-206ENST00000493553 KLHL42Q9P2K6 505 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 XPR1Q9UBH6 696 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 HS3ST2Q9Y278 367 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 STK38LQ9Y2H1 464 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 CHD5Q8TDI0 1954 aa9.97□□□□□ -0.81
PRPF3-206ENST00000493553 NYNRINQ9P2P1 1898 aaKnown RBP9.96□□□□□ -0.81
PRPF3-206ENST00000493553 LCHNA4D1U4 455 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 PRR19A6NJB7 356 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 CAPN14A8MX76 684 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 DLX3O60479 287 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 MAGEC1O60732 1142 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 DIAPH2O60879 1101 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 CIB2O75838 187 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 SRP72O76094 671 aaKnown RBP9.96□□□□□ -0.82
PRPF3-206ENST00000493553 RHOBTB1O94844 696 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 POP4O95707 220 aaKnown RBP9.96□□□□□ -0.82
PRPF3-206ENST00000493553 ASLP04424 464 aa9.96□□□□□ -0.82
PRPF3-206ENST00000493553 LINC00271P0C7V0 271 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms