RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 UGT1A8Q9HAW9 530 aa24.38■■□□□ 1.49
UPF3A-209ENST00000492270 GLYATL1P3A0A0U1RQE8 302 aa24.37■■□□□ 1.49
UPF3A-209ENST00000492270 CHUKO15111 745 aa24.37■■□□□ 1.49
UPF3A-209ENST00000492270 MSLNQ13421 630 aaPredicted RBP24.37■■□□□ 1.49
UPF3A-209ENST00000492270 BIRC2Q13490 618 aa24.37■■□□□ 1.49
UPF3A-209ENST00000492270 AMZ1Q400G9 498 aa24.37■■□□□ 1.49
UPF3A-209ENST00000492270 DENND5AQ6IQ26 1287 aa24.37■■□□□ 1.49
UPF3A-209ENST00000492270 ZNF662Q6ZS27 426 aa24.37■■□□□ 1.49
UPF3A-209ENST00000492270 ZNF761Q86XN6 746 aaPredicted RBP24.37■■□□□ 1.49
UPF3A-209ENST00000492270 SLC13A5Q86YT5 568 aaPredicted RBP24.37■■□□□ 1.49
UPF3A-209ENST00000492270 SFRP1Q8N474 314 aa24.37■■□□□ 1.49
UPF3A-209ENST00000492270 HNRNPLLQ8WVV9 542 aaKnown RBP24.37■■□□□ 1.49
UPF3A-209ENST00000492270 GRAMD1AQ96CP6 724 aa24.37■■□□□ 1.49
UPF3A-209ENST00000492270 PRR11Q96HE9 360 aaPredicted RBP24.37■■□□□ 1.49
UPF3A-209ENST00000492270 RDH14Q9HBH5 336 aa24.37■■□□□ 1.49
UPF3A-209ENST00000492270 ASCL3Q9NQ33 180 aa24.37■■□□□ 1.49
UPF3A-209ENST00000492270 KLC4Q9NSK0 619 aa24.37■■□□□ 1.49
UPF3A-209ENST00000492270 SLC23A2Q9UGH3 650 aa24.37■■□□□ 1.49
UPF3A-209ENST00000492270 RALYQ9UKM9 306 aaKnown RBP24.37■■□□□ 1.49
UPF3A-209ENST00000492270 PKP3Q9Y446 797 aa24.37■■□□□ 1.49
UPF3A-209ENST00000492270 CCDC187A0A096LP49 1063 aa24.36■■□□□ 1.49
UPF3A-209ENST00000492270 A6NCN8 305 aa24.36■■□□□ 1.49
UPF3A-209ENST00000492270 AGRPO00253 132 aa24.36■■□□□ 1.49
UPF3A-209ENST00000492270 STX7O15400 261 aaKnown RBP24.36■■□□□ 1.49
UPF3A-209ENST00000492270 SNX2O60749 519 aa24.36■■□□□ 1.49
UPF3A-209ENST00000492270 ZNF189O75820 626 aaPredicted RBP24.36■■□□□ 1.49
UPF3A-209ENST00000492270 ACTN2P35609 894 aa24.36■■□□□ 1.49
UPF3A-209ENST00000492270 INHBCP55103 352 aa24.36■■□□□ 1.49
UPF3A-209ENST00000492270 RPS6KA1Q15418 735 aa24.36■■□□□ 1.49
UPF3A-209ENST00000492270 TAF1AQ15573 450 aaPredicted RBP24.36■■□□□ 1.49
UPF3A-209ENST00000492270 KCTD11Q693B1 232 aa24.36■■□□□ 1.49
UPF3A-209ENST00000492270 LRRTM4Q86VH4 590 aa24.36■■□□□ 1.49
UPF3A-209ENST00000492270 ZNF547Q8IVP9 402 aa24.36■■□□□ 1.49
UPF3A-209ENST00000492270 OR4K2Q8NGD2 314 aa24.36■■□□□ 1.49
UPF3A-209ENST00000492270 SNIP1Q8TAD8 396 aaKnown RBP24.36■■□□□ 1.49
UPF3A-209ENST00000492270 GDAP1Q8TB36 358 aa24.36■■□□□ 1.49
UPF3A-209ENST00000492270 LIN37Q96GY3 246 aaPredicted RBP24.36■■□□□ 1.49
UPF3A-209ENST00000492270 GRPEL1Q9HAV7 217 aa24.36■■□□□ 1.49
UPF3A-209ENST00000492270 GPR89AB7ZAQ6 455 aa24.35■■□□□ 1.49
UPF3A-209ENST00000492270 LIASO43766 372 aa24.35■■□□□ 1.49
UPF3A-209ENST00000492270 VEGFDO43915 354 aa24.35■■□□□ 1.49
UPF3A-209ENST00000492270 DXOO77932 396 aaKnown RBP24.35■■□□□ 1.49
UPF3A-209ENST00000492270 CDK14O94921 469 aa24.35■■□□□ 1.49
UPF3A-209ENST00000492270 GPR89BP0CG08 455 aa24.35■■□□□ 1.49
UPF3A-209ENST00000492270 LPOP22079 712 aaPredicted RBP24.35■■□□□ 1.49
UPF3A-209ENST00000492270 EIF2S3P41091 472 aaKnown RBP24.35■■□□□ 1.49
UPF3A-209ENST00000492270 INSCQ1MX18 579 aa24.35■■□□□ 1.49
UPF3A-209ENST00000492270 PARP6Q2NL67 630 aa24.35■■□□□ 1.49
UPF3A-209ENST00000492270 MAP9Q49MG5 647 aa24.35■■□□□ 1.49
UPF3A-209ENST00000492270 ZDHHC20Q5W0Z9 365 aa24.35■■□□□ 1.49
UPF3A-209ENST00000492270 WDR36Q8NI36 951 aaKnown RBP24.35■■□□□ 1.49
UPF3A-209ENST00000492270 DTX3LQ8TDB6 740 aa24.35■■□□□ 1.49
UPF3A-209ENST00000492270 C1orf54Q8WWF1 131 aa24.35■■□□□ 1.49
UPF3A-209ENST00000492270 FGF11Q92914 225 aa24.35■■□□□ 1.49
UPF3A-209ENST00000492270 PPP1R2P1Q96PQ5 205 aa24.35■■□□□ 1.49
UPF3A-209ENST00000492270 ALS2CR12Q96Q35 445 aa24.35■■□□□ 1.49
UPF3A-209ENST00000492270 NUDT22Q9BRQ3 303 aa24.35■■□□□ 1.49
UPF3A-209ENST00000492270 OSGEPL1Q9H4B0 414 aa24.35■■□□□ 1.49
UPF3A-209ENST00000492270 PRDM8Q9NQV8 689 aa24.35■■□□□ 1.49
UPF3A-209ENST00000492270 FKBPLQ9UIM3 349 aa24.35■■□□□ 1.49
UPF3A-209ENST00000492270 A0A087WV48 116 aa24.34■■□□□ 1.49
UPF3A-209ENST00000492270 CCKBRP32239 447 aa24.34■■□□□ 1.49
UPF3A-209ENST00000492270 FASLGP48023 281 aa24.34■■□□□ 1.49
UPF3A-209ENST00000492270 TMEM115Q12893 351 aaPredicted RBP24.34■■□□□ 1.49
UPF3A-209ENST00000492270 OASLQ15646 514 aaKnown RBP24.34■■□□□ 1.49
UPF3A-209ENST00000492270 COL28A1Q2UY09 1125 aa24.34■■□□□ 1.49
UPF3A-209ENST00000492270 NKAIN2Q5VXU1 208 aa24.34■■□□□ 1.49
UPF3A-209ENST00000492270 MICALCLQ6ZW33 695 aa24.34■■□□□ 1.49
UPF3A-209ENST00000492270 USP53Q70EK8 1073 aa24.34■■□□□ 1.49
UPF3A-209ENST00000492270 SLITRK4Q8IW52 837 aa24.34■■□□□ 1.49
UPF3A-209ENST00000492270 OR13C4Q8NGS5 318 aa24.34■■□□□ 1.49
UPF3A-209ENST00000492270 SEMA6CQ9H3T2 930 aa24.34■■□□□ 1.49
UPF3A-209ENST00000492270 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP24.34■■□□□ 1.49
UPF3A-209ENST00000492270 DNAJC16Q9Y2G8 782 aa24.34■■□□□ 1.49
UPF3A-209ENST00000492270 PPP2R2CQ9Y2T4 447 aa24.34■■□□□ 1.49
UPF3A-209ENST00000492270 C2orf81A6NN90 581 aa24.33■■□□□ 1.49
UPF3A-209ENST00000492270 KMOO15229 486 aa24.33■■□□□ 1.49
UPF3A-209ENST00000492270 PPFIA2O75334 1257 aa24.33■■□□□ 1.49
UPF3A-209ENST00000492270 F3P13726 295 aa24.33■■□□□ 1.49
UPF3A-209ENST00000492270 HGFP14210 728 aa24.33■■□□□ 1.49
UPF3A-209ENST00000492270 ZNF7P17097 686 aaPredicted RBP24.33■■□□□ 1.49
UPF3A-209ENST00000492270 ITPKBP27987 946 aa24.33■■□□□ 1.49
UPF3A-209ENST00000492270 CD1CP29017 333 aa24.33■■□□□ 1.49
UPF3A-209ENST00000492270 ZFP36L1Q07352 338 aaKnown RBP24.33■■□□□ 1.49
UPF3A-209ENST00000492270 CHCHD2P9Q5T1J5 151 aaPredicted RBP24.33■■□□□ 1.49
UPF3A-209ENST00000492270 GPRC6AQ5T6X5 926 aa24.33■■□□□ 1.49
UPF3A-209ENST00000492270 IYDQ6PHW0 289 aa24.33■■□□□ 1.49
UPF3A-209ENST00000492270 C11orf96Q7Z7L8 435 aa24.33■■□□□ 1.49
UPF3A-209ENST00000492270 LSMEM2Q8N112 164 aa24.33■■□□□ 1.49
UPF3A-209ENST00000492270 DDHD1Q8NEL9 900 aa24.33■■□□□ 1.49
UPF3A-209ENST00000492270 BRSK1Q8TDC3 778 aa24.33■■□□□ 1.49
UPF3A-209ENST00000492270 RTP4Q96DX8 246 aa24.33■■□□□ 1.49
UPF3A-209ENST00000492270 CRELD1Q96HD1 420 aa24.33■■□□□ 1.49
UPF3A-209ENST00000492270 ZNF578Q96N58 590 aaPredicted RBP24.33■■□□□ 1.49
UPF3A-209ENST00000492270 TMEM74Q96NL1 305 aa24.33■■□□□ 1.49
UPF3A-209ENST00000492270 TLR10Q9BXR5 811 aa24.33■■□□□ 1.49
UPF3A-209ENST00000492270 ARNT2Q9HBZ2 717 aa24.33■■□□□ 1.49
UPF3A-209ENST00000492270 PIH1D1Q9NWS0 290 aaKnown RBP24.33■■□□□ 1.49
UPF3A-209ENST00000492270 PCDHGA8Q9Y5G5 932 aa24.33■■□□□ 1.49
UPF3A-209ENST00000492270 IGHV1OR21-1A0A087WYE8 117 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms