RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 PIWIL4Q7Z3Z4 852 aaKnown RBP3.52□□□□□ -1.85
HMGN1-218ENST00000490032 ZNF354CQ86Y25 554 aa3.52□□□□□ -1.85
HMGN1-218ENST00000490032 ARMC8Q8IUR7 673 aa3.52□□□□□ -1.85
HMGN1-218ENST00000490032 MAPK1IP1LQ8NDC0 245 aa3.52□□□□□ -1.85
HMGN1-218ENST00000490032 MMABQ96EY8 250 aaPredicted RBP3.52□□□□□ -1.85
HMGN1-218ENST00000490032 LRR1Q96L50 414 aa3.52□□□□□ -1.85
HMGN1-218ENST00000490032 MAP7D2Q96T17 732 aa3.52□□□□□ -1.85
HMGN1-218ENST00000490032 PAIP1Q9H074 479 aaKnown RBP3.52□□□□□ -1.85
HMGN1-218ENST00000490032 RAB6CQ9H0N0 254 aa3.52□□□□□ -1.85
HMGN1-218ENST00000490032 SLC52A3Q9NQ40 469 aa3.52□□□□□ -1.85
HMGN1-218ENST00000490032 PCDHB16Q9NRJ7 776 aa3.52□□□□□ -1.85
HMGN1-218ENST00000490032 C2orf42Q9NWW7 574 aa3.52□□□□□ -1.85
HMGN1-218ENST00000490032 KLHL9Q9P2J3 617 aa3.52□□□□□ -1.85
HMGN1-218ENST00000490032 PDP2Q9P2J9 529 aa3.52□□□□□ -1.85
HMGN1-218ENST00000490032 KCNK7Q9Y2U2 307 aa3.52□□□□□ -1.85
HMGN1-218ENST00000490032 MAU2Q9Y6X3 613 aa3.52□□□□□ -1.85
HMGN1-218ENST00000490032 PRAG1Q86YV5 1406 aa3.52□□□□□ -1.85
HMGN1-218ENST00000490032 A0A0G2JNG1 304 aa3.51□□□□□ -1.85
HMGN1-218ENST00000490032 A0A1B0GVY2 172 aa3.51□□□□□ -1.85
HMGN1-218ENST00000490032 EIF3CLB5ME19 914 aaKnown RBP3.51□□□□□ -1.85
HMGN1-218ENST00000490032 TGFB1I1O43294 461 aa3.51□□□□□ -1.85
HMGN1-218ENST00000490032 JRKO75564 520 aa3.51□□□□□ -1.85
HMGN1-218ENST00000490032 SEC14L2O76054 403 aa3.51□□□□□ -1.85
HMGN1-218ENST00000490032 WISP2O76076 250 aa3.51□□□□□ -1.85
HMGN1-218ENST00000490032 PYGLP06737 847 aa3.51□□□□□ -1.85
HMGN1-218ENST00000490032 GNB3P16520 340 aa3.51□□□□□ -1.85
HMGN1-218ENST00000490032 ICAM3P32942 547 aa3.51□□□□□ -1.85
HMGN1-218ENST00000490032 PPM1FP49593 454 aaPredicted RBP3.51□□□□□ -1.85
HMGN1-218ENST00000490032 KIR2DS5Q14953 304 aa3.51□□□□□ -1.85
HMGN1-218ENST00000490032 CCNG2Q16589 344 aa3.51□□□□□ -1.85
HMGN1-218ENST00000490032 RBMS3Q6XE24 437 aaKnown RBP3.51□□□□□ -1.85
HMGN1-218ENST00000490032 C15orf39Q6ZRI6 1047 aa3.51□□□□□ -1.85
HMGN1-218ENST00000490032 ANO5Q75V66 913 aa3.51□□□□□ -1.85
HMGN1-218ENST00000490032 ESX1Q8N693 406 aa3.51□□□□□ -1.85
HMGN1-218ENST00000490032 TSPYL6Q8N831 410 aa3.51□□□□□ -1.85
HMGN1-218ENST00000490032 ZNF248Q8NDW4 579 aa3.51□□□□□ -1.85
HMGN1-218ENST00000490032 OR1J2Q8NGS2 313 aa3.51□□□□□ -1.85
HMGN1-218ENST00000490032 FAM149B1Q96BN6 582 aa3.51□□□□□ -1.85
HMGN1-218ENST00000490032 SCPEP1Q9HB40 452 aa3.51□□□□□ -1.85
HMGN1-218ENST00000490032 ZBTB20Q9HC78 741 aaPredicted RBP3.51□□□□□ -1.85
HMGN1-218ENST00000490032 TAS2R10Q9NYW0 307 aa3.51□□□□□ -1.85
HMGN1-218ENST00000490032 DLGAP2Q9P1A6 1054 aa3.51□□□□□ -1.85
HMGN1-218ENST00000490032 STK39Q9UEW8 545 aa3.51□□□□□ -1.85
HMGN1-218ENST00000490032 C2CD2Q9Y426 696 aa3.51□□□□□ -1.85
HMGN1-218ENST00000490032 CLIC4Q9Y696 253 aa3.51□□□□□ -1.85
HMGN1-218ENST00000490032 C1orf226A1L170 272 aa3.5□□□□□ -1.85
HMGN1-218ENST00000490032 NPIPB15A6NHN6 443 aaPredicted RBP3.5□□□□□ -1.85
HMGN1-218ENST00000490032 HHLA1C9JL84 531 aa3.5□□□□□ -1.85
HMGN1-218ENST00000490032 TMEM178BH3BS89 294 aa3.5□□□□□ -1.85
HMGN1-218ENST00000490032 NR5A2O00482 541 aa3.5□□□□□ -1.85
HMGN1-218ENST00000490032 CIDEAO60543 219 aa3.5□□□□□ -1.85
HMGN1-218ENST00000490032 TSHBP01222 138 aa3.5□□□□□ -1.85
HMGN1-218ENST00000490032 IGLV1-44P01699 117 aa3.5□□□□□ -1.85
HMGN1-218ENST00000490032 UBL4AP11441 157 aa3.5□□□□□ -1.85
HMGN1-218ENST00000490032 MCCP23508 829 aa3.5□□□□□ -1.85
HMGN1-218ENST00000490032 HARS2P49590 506 aaKnown RBP3.5□□□□□ -1.85
HMGN1-218ENST00000490032 F2RL1P55085 397 aa3.5□□□□□ -1.85
HMGN1-218ENST00000490032 RPL7AP62424 266 aaKnown RBP3.5□□□□□ -1.85
HMGN1-218ENST00000490032 OLR1P78380 273 aa3.5□□□□□ -1.85
HMGN1-218ENST00000490032 ZBED6P86452 979 aa3.5□□□□□ -1.85
HMGN1-218ENST00000490032 DPCR1Q3MIW9 517 aa3.5□□□□□ -1.85
HMGN1-218ENST00000490032 ZNF805Q5CZA5 627 aa3.5□□□□□ -1.85
HMGN1-218ENST00000490032 NSUN5P2Q63ZY6 315 aa3.5□□□□□ -1.85
HMGN1-218ENST00000490032 ZNF772Q68DY9 489 aaPredicted RBP3.5□□□□□ -1.85
HMGN1-218ENST00000490032 ACAD10Q6JQN1 1059 aa3.5□□□□□ -1.85
HMGN1-218ENST00000490032 CPXCR1Q8N123 301 aa3.5□□□□□ -1.85
HMGN1-218ENST00000490032 SLC38A9Q8NBW4 561 aa3.5□□□□□ -1.85
HMGN1-218ENST00000490032 MYRIPQ8NFW9 859 aa3.5□□□□□ -1.85
HMGN1-218ENST00000490032 RDM1Q8NG50 284 aa3.5□□□□□ -1.85
HMGN1-218ENST00000490032 WDR20Q8TBZ3 569 aa3.5□□□□□ -1.85
HMGN1-218ENST00000490032 UTP15Q8TED0 518 aaKnown RBP3.5□□□□□ -1.85
HMGN1-218ENST00000490032 PIP5K1AQ99755 562 aa3.5□□□□□ -1.85
HMGN1-218ENST00000490032 ADPRHL2Q9NX46 363 aa3.5□□□□□ -1.85
HMGN1-218ENST00000490032 COPG2Q9UBF2 871 aa3.5□□□□□ -1.85
HMGN1-218ENST00000490032 CNOT8Q9UFF9 292 aaKnown RBP3.5□□□□□ -1.85
HMGN1-218ENST00000490032 ARHGAP26Q9UNA1 814 aa3.5□□□□□ -1.85
HMGN1-218ENST00000490032 TMEM184BQ9Y519 407 aaPredicted RBP3.5□□□□□ -1.85
HMGN1-218ENST00000490032 A0A0G2JLW4 131 aa3.49□□□□□ -1.85
HMGN1-218ENST00000490032 A0A1W2PQF6 199 aa3.49□□□□□ -1.85
HMGN1-218ENST00000490032 KANSL1LA0AUZ9 987 aa3.49□□□□□ -1.85
HMGN1-218ENST00000490032 EIF4E1BA6NMX2 242 aaKnown RBP3.49□□□□□ -1.85
HMGN1-218ENST00000490032 H0YIN7 160 aa3.49□□□□□ -1.85
HMGN1-218ENST00000490032 EXTL3O43909 919 aa3.49□□□□□ -1.85
HMGN1-218ENST00000490032 CAVIN2O95810 425 aa3.49□□□□□ -1.85
HMGN1-218ENST00000490032 CD48P09326 243 aa3.49□□□□□ -1.85
HMGN1-218ENST00000490032 PRCPP42785 496 aa3.49□□□□□ -1.85
HMGN1-218ENST00000490032 RARSP54136 660 aaKnown RBP3.49□□□□□ -1.85
HMGN1-218ENST00000490032 MRPS34P82930 218 aaKnown RBP3.49□□□□□ -1.85
HMGN1-218ENST00000490032 TMEM115Q12893 351 aaPredicted RBP3.49□□□□□ -1.85
HMGN1-218ENST00000490032 CSTF3Q12996 717 aaKnown RBP3.49□□□□□ -1.85
HMGN1-218ENST00000490032 PDE1CQ14123 709 aaPredicted RBP3.49□□□□□ -1.85
HMGN1-218ENST00000490032 FRG1Q14331 258 aaKnown RBP3.49□□□□□ -1.85
HMGN1-218ENST00000490032 PNLIPRP3Q17RR3 467 aa3.49□□□□□ -1.85
HMGN1-218ENST00000490032 LCE3CQ5T5A8 94 aa3.49□□□□□ -1.85
HMGN1-218ENST00000490032 PACS1Q6VY07 963 aa3.49□□□□□ -1.85
HMGN1-218ENST00000490032 PM20D2Q8IYS1 436 aa3.49□□□□□ -1.85
HMGN1-218ENST00000490032 INTS12Q96CB8 462 aaKnown RBP3.49□□□□□ -1.85
HMGN1-218ENST00000490032 SENP5Q96HI0 755 aaPredicted RBP3.49□□□□□ -1.85
HMGN1-218ENST00000490032 ZNF599Q96NL3 588 aa3.49□□□□□ -1.85
HMGN1-218ENST00000490032 ATP2A1O14983 1001 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms