RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 GRB7Q14451 532 aa25.9■■□□□ 1.74
HLA-C-208ENST00000487245 NCEH1Q6PIU2 408 aa25.9■■□□□ 1.74
HLA-C-208ENST00000487245 TXNDC11Q6PKC3 985 aa25.9■■□□□ 1.74
HLA-C-208ENST00000487245 CYP2R1Q6VVX0 501 aa25.9■■□□□ 1.74
HLA-C-208ENST00000487245 C16orf59Q7L2K0 433 aa25.9■■□□□ 1.74
HLA-C-208ENST00000487245 DTNBP1Q96EV8 351 aa25.9■■□□□ 1.74
HLA-C-208ENST00000487245 HAUS8Q9BT25 410 aa25.9■■□□□ 1.74
HLA-C-208ENST00000487245 POLG2Q9UHN1 485 aa25.9■■□□□ 1.74
HLA-C-208ENST00000487245 PCDHGC4Q9Y5F7 938 aa25.9■■□□□ 1.74
HLA-C-208ENST00000487245 H7C0S8 307 aa25.89■■□□□ 1.74
HLA-C-208ENST00000487245 FXYD1O00168 92 aa25.89■■□□□ 1.74
HLA-C-208ENST00000487245 PPP6CO00743 305 aa25.89■■□□□ 1.74
HLA-C-208ENST00000487245 ANGPT2O15123 496 aa25.89■■□□□ 1.74
HLA-C-208ENST00000487245 STX7O15400 261 aaKnown RBP25.89■■□□□ 1.74
HLA-C-208ENST00000487245 PQBP1O60828 265 aaKnown RBP25.89■■□□□ 1.74
HLA-C-208ENST00000487245 TMCC1O94876 653 aa25.89■■□□□ 1.74
HLA-C-208ENST00000487245 PRSS56P0CW18 603 aa25.89■■□□□ 1.74
HLA-C-208ENST00000487245 IRF1P10914 325 aa25.89■■□□□ 1.74
HLA-C-208ENST00000487245 ARF5P84085 180 aa25.89■■□□□ 1.74
HLA-C-208ENST00000487245 PLD1Q13393 1074 aa25.89■■□□□ 1.74
HLA-C-208ENST00000487245 PTPRNQ16849 979 aa25.89■■□□□ 1.74
HLA-C-208ENST00000487245 ANKS6Q68DC2 871 aa25.89■■□□□ 1.74
HLA-C-208ENST00000487245 BLOC1S3Q6QNY0 202 aa25.89■■□□□ 1.74
HLA-C-208ENST00000487245 B3GNT6Q6ZMB0 384 aa25.89■■□□□ 1.74
HLA-C-208ENST00000487245 SLC15A3Q8IY34 581 aa25.89■■□□□ 1.74
HLA-C-208ENST00000487245 TRPC4APQ8TEL6 797 aa25.89■■□□□ 1.74
HLA-C-208ENST00000487245 HIPK3Q9H422 1215 aa25.89■■□□□ 1.74
HLA-C-208ENST00000487245 TMEM45AQ9NWC5 275 aa25.89■■□□□ 1.74
HLA-C-208ENST00000487245 LRRC14BA6NHZ5 514 aa25.89■■□□□ 1.73
HLA-C-208ENST00000487245 HNRNPRO43390 633 aaKnown RBP25.89■■□□□ 1.73
HLA-C-208ENST00000487245 CSPG5O95196 566 aa25.89■■□□□ 1.73
HLA-C-208ENST00000487245 C1RP00736 705 aa25.89■■□□□ 1.73
HLA-C-208ENST00000487245 EEF1DP29692 281 aaKnown RBP25.89■■□□□ 1.73
HLA-C-208ENST00000487245 NRF1Q16656 503 aa25.89■■□□□ 1.73
HLA-C-208ENST00000487245 NSUN5Q96P11 429 aaKnown RBP25.89■■□□□ 1.73
HLA-C-208ENST00000487245 SLC29A1Q99808 456 aa25.89■■□□□ 1.73
HLA-C-208ENST00000487245 ANKRD60Q9BZ19 345 aa25.89■■□□□ 1.73
HLA-C-208ENST00000487245 FAM50BQ9Y247 325 aa25.89■■□□□ 1.73
HLA-C-208ENST00000487245 GPR45Q9Y5Y3 372 aa25.89■■□□□ 1.73
HLA-C-208ENST00000487245 ZNF839A8K0R7 811 aa25.88■■□□□ 1.73
HLA-C-208ENST00000487245 FKTNO75072 461 aa25.88■■□□□ 1.73
HLA-C-208ENST00000487245 MC4RP32245 332 aa25.88■■□□□ 1.73
HLA-C-208ENST00000487245 INPP5AQ14642 412 aa25.88■■□□□ 1.73
HLA-C-208ENST00000487245 GEN1Q17RS7 908 aa25.88■■□□□ 1.73
HLA-C-208ENST00000487245 MYLK3Q32MK0 819 aa25.88■■□□□ 1.73
HLA-C-208ENST00000487245 INTS11Q5TA45 600 aaKnown RBP25.88■■□□□ 1.73
HLA-C-208ENST00000487245 DDIASQ8IXT1 998 aa25.88■■□□□ 1.73
HLA-C-208ENST00000487245 TTC30BQ8N4P2 665 aa25.88■■□□□ 1.73
HLA-C-208ENST00000487245 MFSD2AQ8NA29 543 aa25.88■■□□□ 1.73
HLA-C-208ENST00000487245 GPR21Q99679 349 aa25.88■■□□□ 1.73
HLA-C-208ENST00000487245 SLC39A3Q9BRY0 314 aa25.88■■□□□ 1.73
HLA-C-208ENST00000487245 GRIP2Q9C0E4 1043 aa25.88■■□□□ 1.73
HLA-C-208ENST00000487245 PNPLA3Q9NST1 481 aa25.88■■□□□ 1.73
HLA-C-208ENST00000487245 ACTR3BQ9P1U1 418 aa25.88■■□□□ 1.73
HLA-C-208ENST00000487245 THEGQ9P2T0 379 aa25.88■■□□□ 1.73
HLA-C-208ENST00000487245 TRMT6Q9UJA5 497 aaKnown RBP25.88■■□□□ 1.73
HLA-C-208ENST00000487245 ARHGAP10A1A4S6 786 aa25.87■■□□□ 1.73
HLA-C-208ENST00000487245 TYW5A2RUC4 315 aaKnown RBP25.87■■□□□ 1.73
HLA-C-208ENST00000487245 CLGNO14967 610 aa25.87■■□□□ 1.73
HLA-C-208ENST00000487245 HTRA2O43464 458 aaPredicted RBP25.87■■□□□ 1.73
HLA-C-208ENST00000487245 ECI2O75521 394 aa25.87■■□□□ 1.73
HLA-C-208ENST00000487245 CCL23P55773 120 aa25.87■■□□□ 1.73
HLA-C-208ENST00000487245 EML3Q32P44 896 aa25.87■■□□□ 1.73
HLA-C-208ENST00000487245 FAM219BQ5XKK7 198 aa25.87■■□□□ 1.73
HLA-C-208ENST00000487245 HJURPQ8NCD3 748 aaPredicted RBP25.87■■□□□ 1.73
HLA-C-208ENST00000487245 CANT1Q8WVQ1 401 aa25.87■■□□□ 1.73
HLA-C-208ENST00000487245 TUBGCP3Q96CW5 907 aa25.87■■□□□ 1.73
HLA-C-208ENST00000487245 SLC45A3Q96JT2 553 aa25.87■■□□□ 1.73
HLA-C-208ENST00000487245 BIRC8Q96P09 236 aa25.87■■□□□ 1.73
HLA-C-208ENST00000487245 NOL11Q9H8H0 719 aaKnown RBP25.87■■□□□ 1.73
HLA-C-208ENST00000487245 FKBPLQ9UIM3 349 aa25.87■■□□□ 1.73
HLA-C-208ENST00000487245 C2orf78A6NCI8 922 aa25.87■■□□□ 1.73
HLA-C-208ENST00000487245 H0Y626 953 aa25.87■■□□□ 1.73
HLA-C-208ENST00000487245 H6PDO95479 791 aa25.87■■□□□ 1.73
HLA-C-208ENST00000487245 CD160O95971 181 aa25.87■■□□□ 1.73
HLA-C-208ENST00000487245 MBL2P11226 248 aaPredicted RBP25.87■■□□□ 1.73
HLA-C-208ENST00000487245 HGFP14210 728 aa25.87■■□□□ 1.73
HLA-C-208ENST00000487245 GRIA3P42263 894 aa25.87■■□□□ 1.73
HLA-C-208ENST00000487245 ADARP55265 1226 aaKnown RBP25.87■■□□□ 1.73
HLA-C-208ENST00000487245 PRKCQQ04759 706 aa25.87■■□□□ 1.73
HLA-C-208ENST00000487245 TRAF2Q12933 501 aa25.87■■□□□ 1.73
HLA-C-208ENST00000487245 VPS26BQ4G0F5 336 aa25.87■■□□□ 1.73
HLA-C-208ENST00000487245 LARP7Q4G0J3 582 aaKnown RBP eCLIP25.87■■□□□ 1.73
HLA-C-208ENST00000487245 UGT3A1Q6NUS8 523 aa25.87■■□□□ 1.73
HLA-C-208ENST00000487245 AMIGO2Q86SJ2 522 aa25.87■■□□□ 1.73
HLA-C-208ENST00000487245 STK40Q8N2I9 435 aa25.87■■□□□ 1.73
HLA-C-208ENST00000487245 NMD3Q96D46 503 aaKnown RBP25.87■■□□□ 1.73
HLA-C-208ENST00000487245 TRIM54Q9BYV2 358 aa25.87■■□□□ 1.73
HLA-C-208ENST00000487245 PFDN4Q9NQP4 134 aa25.87■■□□□ 1.73
HLA-C-208ENST00000487245 C8orf4Q9NR00 106 aa25.87■■□□□ 1.73
HLA-C-208ENST00000487245 CMTM6Q9NX76 183 aa25.87■■□□□ 1.73
HLA-C-208ENST00000487245 LHX3Q9UBR4 397 aa25.87■■□□□ 1.73
HLA-C-208ENST00000487245 PTGDR2Q9Y5Y4 395 aa25.87■■□□□ 1.73
HLA-C-208ENST00000487245 SCN5AQ14524 2016 aa25.86■■□□□ 1.73
HLA-C-208ENST00000487245 TBL1XO60907 577 aa25.86■■□□□ 1.73
HLA-C-208ENST00000487245 SLC6A2P23975 617 aa25.86■■□□□ 1.73
HLA-C-208ENST00000487245 PTGER3P43115 390 aa25.86■■□□□ 1.73
HLA-C-208ENST00000487245 NHSL2Q5HYW2 709 aa25.86■■□□□ 1.73
HLA-C-208ENST00000487245 ZBTB49Q6ZSB9 765 aa25.86■■□□□ 1.73
HLA-C-208ENST00000487245 EFHBQ8N7U6 833 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms