RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 B3GNT8Q7Z7M8 397 aa13.72□□□□□ -0.21
VARS-225ENST00000482996 ADGRG6Q86SQ4 1221 aa13.72□□□□□ -0.21
VARS-225ENST00000482996 PIM3Q86V86 326 aa13.72□□□□□ -0.21
VARS-225ENST00000482996 LRRTM4Q86VH4 590 aa13.72□□□□□ -0.21
VARS-225ENST00000482996 FBXO39Q8N4B4 442 aa13.72□□□□□ -0.21
VARS-225ENST00000482996 FAM71DQ8N9W8 422 aa13.72□□□□□ -0.21
VARS-225ENST00000482996 ZNF248Q8NDW4 579 aa13.72□□□□□ -0.21
VARS-225ENST00000482996 BRSK1Q8TDC3 778 aa13.72□□□□□ -0.21
VARS-225ENST00000482996 TTC25Q96NG3 672 aa13.72□□□□□ -0.21
VARS-225ENST00000482996 ALS2CR12Q96Q35 445 aa13.72□□□□□ -0.21
VARS-225ENST00000482996 ZCCHC2Q9C0B9 1178 aaKnown RBP13.72□□□□□ -0.21
VARS-225ENST00000482996 IL26Q9NPH9 171 aa13.72□□□□□ -0.21
VARS-225ENST00000482996 KCNK6Q9Y257 313 aa13.72□□□□□ -0.21
VARS-225ENST00000482996 PCYT1BQ9Y5K3 369 aaPredicted RBP13.72□□□□□ -0.21
VARS-225ENST00000482996 CELSR3Q9NYQ7 3312 aa13.72□□□□□ -0.21
VARS-225ENST00000482996 TRBV23OR9-2A0A075B6M9 112 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 GLYATL1P3A0A0U1RQE8 302 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 OR5K4A6NMS3 321 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 PLD2O14939 933 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 PPM1DO15297 605 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 B4GAT1O43505 415 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 SNX2O60749 519 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 CDK14O94921 469 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 CCDC175P0C221 793 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 LPOP22079 712 aaPredicted RBP13.71□□□□□ -0.21
VARS-225ENST00000482996 ADRA1AP35348 466 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 FASLGP48023 281 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 PPM1FP49593 454 aaPredicted RBP13.71□□□□□ -0.21
VARS-225ENST00000482996 CLCNKAP51800 687 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 ITGA9Q13797 1035 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 TAF1AQ15573 450 aaPredicted RBP13.71□□□□□ -0.21
VARS-225ENST00000482996 CHRNA6Q15825 494 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 INSCQ1MX18 579 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 PARP6Q2NL67 630 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 COL28A1Q2UY09 1125 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 CRTC3Q6UUV7 619 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 FAM151BQ6UXP7 276 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 RANBP10Q6VN20 620 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 SFRP1Q8N474 314 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 AVL9Q8NBF6 648 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 SLC37A2Q8TED4 501 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 TMEM159Q96B96 161 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 SH3KBP1Q96B97 665 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 SLC46A1Q96NT5 459 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 SLC38A3Q99624 504 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 TBL1YQ9BQ87 522 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 APOL2Q9BQE5 337 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 GORASP1Q9BQQ3 440 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 OSGEPL1Q9H4B0 414 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 ASCL3Q9NQ33 180 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 KLC4Q9NSK0 619 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 KCNK4Q9NYG8 393 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 AKAP7Q9P0M2 348 aaPredicted RBP13.71□□□□□ -0.21
VARS-225ENST00000482996 TBC1D29Q9UFV1 150 aa13.71□□□□□ -0.21
VARS-225ENST00000482996 FEZ2Q9UHY8 353 aaPredicted RBP13.71□□□□□ -0.21
VARS-225ENST00000482996 R3HDM2Q9Y2K5 976 aaKnown RBP13.71□□□□□ -0.21
VARS-225ENST00000482996 KIF26BQ2KJY2 2108 aa13.7□□□□□ -0.22
VARS-225ENST00000482996 COL27A1Q8IZC6 1860 aaPredicted RBP13.7□□□□□ -0.22
VARS-225ENST00000482996 KIR2DS5A0A0G2JLQ3 304 aa13.7□□□□□ -0.22
VARS-225ENST00000482996 A0A0G2JNG1 304 aa13.7□□□□□ -0.22
VARS-225ENST00000482996 A0A1W2PNU3 283 aaPredicted RBP13.7□□□□□ -0.22
VARS-225ENST00000482996 KIR2DS3K7RE56 304 aa13.7□□□□□ -0.22
VARS-225ENST00000482996 CHUKO15111 745 aa13.7□□□□□ -0.22
VARS-225ENST00000482996 BUD23O43709 281 aaKnown RBP13.7□□□□□ -0.22
VARS-225ENST00000482996 MTX2O75431 263 aa13.7□□□□□ -0.22
VARS-225ENST00000482996 TNFSF15O95150 251 aa13.7□□□□□ -0.22
VARS-225ENST00000482996 CRTAMO95727 393 aa13.7□□□□□ -0.22
VARS-225ENST00000482996 ITGA2BP08514 1039 aa13.7□□□□□ -0.22
VARS-225ENST00000482996 JMJD7P0C870 316 aa13.7□□□□□ -0.22
VARS-225ENST00000482996 F3P13726 295 aa13.7□□□□□ -0.22
VARS-225ENST00000482996 ZNF7P17097 686 aaPredicted RBP13.7□□□□□ -0.22
VARS-225ENST00000482996 VCLP18206 1134 aa13.7□□□□□ -0.22
VARS-225ENST00000482996 GPLD1P80108 840 aa13.7□□□□□ -0.22
VARS-225ENST00000482996 PDE1BQ01064 536 aa13.7□□□□□ -0.22
VARS-225ENST00000482996 ZFP36L1Q07352 338 aaKnown RBP13.7□□□□□ -0.22
VARS-225ENST00000482996 TMEM115Q12893 351 aaPredicted RBP13.7□□□□□ -0.22
VARS-225ENST00000482996 KIR2DS5Q14953 304 aa13.7□□□□□ -0.22
VARS-225ENST00000482996 RPS6KA1Q15418 735 aa13.7□□□□□ -0.22
VARS-225ENST00000482996 P3H1Q32P28 736 aa13.7□□□□□ -0.22
VARS-225ENST00000482996 LDLRAP1Q5SW96 308 aa13.7□□□□□ -0.22
VARS-225ENST00000482996 PHF19Q5T6S3 580 aa13.7□□□□□ -0.22
VARS-225ENST00000482996 IYDQ6PHW0 289 aa13.7□□□□□ -0.22
VARS-225ENST00000482996 USP53Q70EK8 1073 aa13.7□□□□□ -0.22
VARS-225ENST00000482996 SLC9B2Q86UD5 537 aa13.7□□□□□ -0.22
VARS-225ENST00000482996 TRAPPC5Q8IUR0 188 aa13.7□□□□□ -0.22
VARS-225ENST00000482996 LRRC8AQ8IWT6 810 aa13.7□□□□□ -0.22
VARS-225ENST00000482996 SLC35B2Q8TB61 432 aa13.7□□□□□ -0.22
VARS-225ENST00000482996 TRIM44Q96DX7 344 aaPredicted RBP13.7□□□□□ -0.22
VARS-225ENST00000482996 AHCYL2Q96HN2 611 aaKnown RBP13.7□□□□□ -0.22
VARS-225ENST00000482996 DPYSL5Q9BPU6 564 aa13.7□□□□□ -0.22
VARS-225ENST00000482996 TIMM29Q9BSF4 260 aa13.7□□□□□ -0.22
VARS-225ENST00000482996 FRMD8P1Q9BZ68 369 aaPredicted RBP13.7□□□□□ -0.22
VARS-225ENST00000482996 ZMYND15Q9H091 742 aa13.7□□□□□ -0.22
VARS-225ENST00000482996 SARS2Q9NP81 518 aaKnown RBP13.7□□□□□ -0.22
VARS-225ENST00000482996 ARL5AQ9Y689 179 aa13.7□□□□□ -0.22
VARS-225ENST00000482996 ZFC3H1O60293 1989 aaKnown RBP13.7□□□□□ -0.22
VARS-225ENST00000482996 NBEAQ8NFP9 2946 aa13.7□□□□□ -0.22
VARS-225ENST00000482996 IGHV1OR21-1A0A087WYE8 117 aa13.69□□□□□ -0.22
VARS-225ENST00000482996 TCRBV7S2A1N4TA0A589 114 aa13.69□□□□□ -0.22
VARS-225ENST00000482996 PSMD3O43242 534 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms