RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 ZSCAN5AQ9BUG6 496 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 FICDQ9BVA6 458 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 FSD1LQ9BXM9 530 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 LACRTQ9GZZ8 138 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 CARD9Q9H257 536 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 PRDM8Q9NQV8 689 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 KLC4Q9NSK0 619 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 TRIM10Q9UDY6 481 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 KLHL3Q9UH77 587 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 PCDHGA7Q9Y5G6 932 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 EPN1Q9Y6I3 576 aaPredicted RBP10.35□□□□□ -0.75
CPSF4-212ENST00000482251 MGAQ8IWI9 3026 aa10.35□□□□□ -0.75
CPSF4-212ENST00000482251 A0A0U1RQJ8 604 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 RGSL1A5PLK6 1076 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 A6NCN8 305 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 PDZK1P1A8MUH7 402 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 C9orf172C9J069 976 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 APOC4-APOC2K7ER74 178 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 PJA2O43164 708 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 ZW10O43264 779 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 DUX1O43812 170 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 C1QL1O75973 258 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 APOC2P02655 101 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 THRAP10827 490 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 F3P13726 295 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 CTNNA2P26232 953 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 GPR3P46089 330 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 FASLGP48023 281 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 OTUD4Q01804 1114 aaKnown RBP10.34□□□□□ -0.75
CPSF4-212ENST00000482251 VAC14Q08AM6 782 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 PTPRCAPQ14761 206 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 SLC1A5Q15758 541 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 PPP2R5EQ16537 467 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 ATP13A5Q4VNC0 1218 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 PCSK4Q6UW60 755 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 CCDC81Q6ZN84 652 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 KIAA1328Q86T90 577 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 TRAPPC5Q8IUR0 188 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 RAVER1Q8IY67 606 aaKnown RBP10.34□□□□□ -0.75
CPSF4-212ENST00000482251 TTC30BQ8N4P2 665 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 OR10G6Q8NH81 332 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 ACTL9Q8TC94 416 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 RNF31Q96EP0 1072 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 APOL2Q9BQE5 337 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 GORASP1Q9BQQ3 440 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 DESI2Q9BSY9 194 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 TBC1D10AQ9BXI6 508 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 GBA3Q9H227 469 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 STN1Q9H668 368 aaKnown RBP10.34□□□□□ -0.75
CPSF4-212ENST00000482251 RMI1Q9H9A7 625 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 RAD18Q9NS91 495 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 AKAP7Q9P0M2 348 aaPredicted RBP10.34□□□□□ -0.75
CPSF4-212ENST00000482251 SLC23A2Q9UGH3 650 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 TMPRSS11EQ9UL52 423 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 PACSIN2Q9UNF0 486 aaPredicted RBP10.34□□□□□ -0.75
CPSF4-212ENST00000482251 ADGRG1Q9Y653 693 aa10.34□□□□□ -0.75
CPSF4-212ENST00000482251 LOC285095A0A1B0GVY8 99 aa10.33□□□□□ -0.76
CPSF4-212ENST00000482251 GRID2IPA4D2P6 1211 aa10.33□□□□□ -0.76
CPSF4-212ENST00000482251 EFCAB7A8K855 629 aa10.33□□□□□ -0.76
CPSF4-212ENST00000482251 HACD1B0YJ81 288 aa10.33□□□□□ -0.76
CPSF4-212ENST00000482251 MTSS1O43312 755 aa10.33□□□□□ -0.76
CPSF4-212ENST00000482251 LIPCP11150 499 aa10.33□□□□□ -0.76
CPSF4-212ENST00000482251 FECHP22830 423 aa10.33□□□□□ -0.76
CPSF4-212ENST00000482251 RPL10P27635 214 aaKnown RBP10.33□□□□□ -0.76
CPSF4-212ENST00000482251 PSMB4P28070 264 aa10.33□□□□□ -0.76
CPSF4-212ENST00000482251 PBLDP30039 288 aaPredicted RBP10.33□□□□□ -0.76
CPSF4-212ENST00000482251 CA5AP35218 305 aa10.33□□□□□ -0.76
CPSF4-212ENST00000482251 SPAM1P38567 509 aa10.33□□□□□ -0.76
CPSF4-212ENST00000482251 LIMK2P53671 638 aa10.33□□□□□ -0.76
CPSF4-212ENST00000482251 DRG2P55039 364 aaKnown RBP10.33□□□□□ -0.76
CPSF4-212ENST00000482251 EIF3EP60228 445 aaKnown RBP10.33□□□□□ -0.76
CPSF4-212ENST00000482251 GPLD1P80108 840 aa10.33□□□□□ -0.76
CPSF4-212ENST00000482251 CHRNA6Q15825 494 aa10.33□□□□□ -0.76
CPSF4-212ENST00000482251 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.33□□□□□ -0.76
CPSF4-212ENST00000482251 IYDQ6PHW0 289 aa10.33□□□□□ -0.76
CPSF4-212ENST00000482251 SLC9B2Q86UD5 537 aa10.33□□□□□ -0.76
CPSF4-212ENST00000482251 LRRTM4Q86VH4 590 aa10.33□□□□□ -0.76
CPSF4-212ENST00000482251 TMTC1Q8IUR5 882 aa10.33□□□□□ -0.76
CPSF4-212ENST00000482251 ZNF547Q8IVP9 402 aa10.33□□□□□ -0.76
CPSF4-212ENST00000482251 SPC24Q8NBT2 197 aa10.33□□□□□ -0.76
CPSF4-212ENST00000482251 OR4D9Q8NGE8 314 aa10.33□□□□□ -0.76
CPSF4-212ENST00000482251 NAT14Q8WUY8 206 aa10.33□□□□□ -0.76
CPSF4-212ENST00000482251 NCSTNQ92542 709 aa10.33□□□□□ -0.76
CPSF4-212ENST00000482251 ALG3Q92685 438 aa10.33□□□□□ -0.76
CPSF4-212ENST00000482251 ART4Q93070 314 aa10.33□□□□□ -0.76
CPSF4-212ENST00000482251 TMEM159Q96B96 161 aa10.33□□□□□ -0.76
CPSF4-212ENST00000482251 FCRL5Q96RD9 977 aa10.33□□□□□ -0.76
CPSF4-212ENST00000482251 CCNL2Q96S94 520 aaPredicted RBP10.33□□□□□ -0.76
CPSF4-212ENST00000482251 OSBPL8Q9BZF1 889 aa10.33□□□□□ -0.76
CPSF4-212ENST00000482251 TRIM39Q9HCM9 518 aa10.33□□□□□ -0.76
CPSF4-212ENST00000482251 SARS2Q9NP81 518 aaKnown RBP10.33□□□□□ -0.76
CPSF4-212ENST00000482251 OCIAD1Q9NX40 245 aa10.33□□□□□ -0.76
CPSF4-212ENST00000482251 SCHIP1Q9P0W5 487 aaPredicted RBP10.33□□□□□ -0.76
CPSF4-212ENST00000482251 NFKBIL1Q9UBC1 381 aaPredicted RBP10.33□□□□□ -0.76
CPSF4-212ENST00000482251 CPNE7Q9UBL6 633 aa10.33□□□□□ -0.76
CPSF4-212ENST00000482251 ARL5AQ9Y689 179 aa10.33□□□□□ -0.76
CPSF4-212ENST00000482251 ATMQ13315 3056 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 SDK2Q58EX2 2172 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 GLYATL1P3A0A0U1RQE8 302 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 OR52A4PA6NMU1 304 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms