RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 KIR2DS3K7RE56 304 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 VEGFDO43915 354 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 PRAMEF10O60809 474 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 PMPCBO75439 489 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 SLC25A14O95258 325 aaPredicted RBP9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 NDUFA10O95299 355 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 PRB1P04280 392 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 LIPCP11150 499 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 XRCC1P18887 633 aaPredicted RBP9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 NFKB1P19838 968 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 CTNNA1P35221 906 aaKnown RBP9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 PTPN7P35236 360 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 EPHA4P54764 986 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 DYNLT1P63172 113 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 MSLNQ13421 630 aaPredicted RBP9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 KIR2DS5Q14953 304 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 SPA17Q15506 151 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 TGIF1Q15583 401 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 MAP9Q49MG5 647 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 SIRPB2Q5JXA9 342 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 PHF19Q5T6S3 580 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 ARHGAP40Q5TG30 622 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 AGAP9Q5VTM2 703 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 NKAIN2Q5VXU1 208 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 ABRAXAS1Q6UWZ7 409 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 RANBP10Q6VN20 620 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 CHST15Q7LFX5 561 aaPredicted RBP9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 KDELC2Q7Z4H8 507 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 ARHGAP22Q7Z5H3 698 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 C11orf96Q7Z7L8 435 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 TMTC1Q8IUR5 882 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 ZNF843Q8N446 348 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 AGBL5Q8NDL9 886 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 HTR3CQ8WXA8 447 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 SH3KBP1Q96B97 665 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 CCDC74BQ96LY2 380 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 QKIQ96PU8 341 aaKnown RBP eCLIP9.6□□□□□ -0.874e-7■■■■■ 40
TMEM39A-207ENST00000482162 TAAR9Q96RI9 348 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 GORASP1Q9BQQ3 440 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 DDA1Q9BW61 102 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 GPR63Q9BZJ6 419 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 EPB41L1Q9H4G0 881 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 KCNK4Q9NYG8 393 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 HACD3Q9P035 362 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 FOXJ2Q9P0K8 574 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 DUSP10Q9Y6W6 482 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 ATMQ13315 3056 aa9.6□□□□□ -0.87
TMEM39A-207ENST00000482162 SETXQ7Z333 2677 aaKnown RBP9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 PIEZO2Q9H5I5 2752 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 LILRA5A6NI73 299 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 EIF4E1BA6NMX2 242 aaKnown RBP9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 APOC4-APOC2K7ER74 178 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 GAPDHSO14556 408 aaPredicted RBP9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 PJA2O43164 708 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 APOC2P02655 101 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 ACP5P13686 325 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 TNNT1P13805 278 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 BRAFP15056 766 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 CTNNA2P26232 953 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 ADRA1AP35348 466 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 CYLC1P35663 651 aaPredicted RBP9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 CHRNA4P43681 627 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 HHEXQ03014 270 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 MPP3Q13368 585 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 NOMO1Q15155 1222 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 LLGL1Q15334 1064 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 SLC1A5Q15758 541 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 PCSK7Q16549 785 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 ATP13A5Q4VNC0 1218 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 ODF2Q5BJF6 829 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 ZNF569Q5MCW4 686 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 ZNF648Q5T619 568 aaPredicted RBP9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 ZDHHC20Q5W0Z9 365 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 CCDC70Q6NSX1 233 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 XKR5Q6UX68 686 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 CCDC81Q6ZN84 652 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 PID1Q7Z2X4 250 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 ZC3H18Q86VM9 953 aaKnown RBP9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 ZFAND4Q86XD8 727 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 LRRC57Q8N9N7 239 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 AVL9Q8NBF6 648 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 RCBTB1Q8NDN9 531 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 RBM41Q96IZ5 413 aaKnown RBP9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 SLC38A3Q99624 504 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 C19orf43Q9BQ61 176 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 TIMM29Q9BSF4 260 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 SPATA16Q9BXB7 569 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 LACRTQ9GZZ8 138 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 OR2AG1Q9H205 316 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 PRDM8Q9NQV8 689 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 UBP1Q9NZI7 540 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 AKAP7Q9P0M2 348 aaPredicted RBP9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 TMEM9Q9P0T7 183 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 SEPT10Q9P0V9 454 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 SCHIP1Q9P0W5 487 aaPredicted RBP9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 ZNF624Q9P2J8 865 aaPredicted RBP9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 CPNE7Q9UBL6 633 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 KCNK6Q9Y257 313 aa9.59□□□□□ -0.87
TMEM39A-207ENST00000482162 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms