RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 PFKPQ01813 784 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 GRSF1Q12849 480 aaKnown RBP eCLIP10.35□□□□□ -0.75
LINC00173-203ENST00000480237 CAMK2GQ13555 558 aaPredicted RBP10.35□□□□□ -0.75
LINC00173-203ENST00000480237 ENPP2Q13822 863 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 CSHL1Q14406 222 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 ACOX1Q15067 660 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 SMAD2Q15796 467 aaKnown RBP10.35□□□□□ -0.75
LINC00173-203ENST00000480237 GLIPR1L2Q4G1C9 344 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 C2orf27AQ580R0 203 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 LRRC8EQ6NSJ5 796 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 KLC3Q6P597 504 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 FAM47EQ6ZV65 393 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 ERN2Q76MJ5 926 aaKnown RBP10.35□□□□□ -0.75
LINC00173-203ENST00000480237 TRMT11Q7Z4G4 463 aaKnown RBP10.35□□□□□ -0.75
LINC00173-203ENST00000480237 HSD11B1LQ7Z5J1 315 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 NUDCD3Q8IVD9 361 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 CENPLQ8N0S6 344 aaPredicted RBP10.35□□□□□ -0.75
LINC00173-203ENST00000480237 RBFAQ8N0V3 343 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 NXPE1Q8N323 547 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 SNIP1Q8TAD8 396 aaKnown RBP10.35□□□□□ -0.75
LINC00173-203ENST00000480237 PPP1R14CQ8TAE6 165 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 ZNF398Q8TD17 642 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 ZNF473Q8WTR7 871 aaKnown RBP10.35□□□□□ -0.75
LINC00173-203ENST00000480237 SREK1Q8WXA9 508 aaKnown RBP10.35□□□□□ -0.75
LINC00173-203ENST00000480237 EZH1Q92800 747 aaPredicted RBP10.35□□□□□ -0.75
LINC00173-203ENST00000480237 FAM136AQ96C01 138 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 ULK4Q96C45 1275 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 ZNF317Q96PQ6 595 aaPredicted RBP10.35□□□□□ -0.75
LINC00173-203ENST00000480237 CCT8L2Q96SF2 557 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 OCSTAMPQ9BR26 566 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 SPATA16Q9BXB7 569 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 C1QTNF1Q9BXJ1 281 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 NMRAL1Q9HBL8 299 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 POPDC3Q9HBV1 291 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 FGFR1OP2Q9NVK5 253 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 TAS2R13Q9NYV9 303 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.35□□□□□ -0.75
LINC00173-203ENST00000480237 GNPTGQ9UJJ9 305 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 RUVBL2Q9Y230 463 aaKnown RBP10.35□□□□□ -0.75
LINC00173-203ENST00000480237 FAM50BQ9Y247 325 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 PCDHB1Q9Y5F3 818 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 MDC1Q14676 2089 aaKnown RBP10.35□□□□□ -0.75
LINC00173-203ENST00000480237 TRBV5-4A0A0C4DH59 114 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 PSMD11O00231 422 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 PRMT5O14744 637 aaPredicted RBP10.35□□□□□ -0.75
LINC00173-203ENST00000480237 BIRC5O15392 142 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 SIAH2O43255 324 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 DNAJC6O75061 913 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 NIPSNAP2O75323 286 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 KLF8O95600 359 aaPredicted RBP10.35□□□□□ -0.75
LINC00173-203ENST00000480237 BPGMP07738 259 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 LTA4HP09960 611 aaKnown RBP10.35□□□□□ -0.75
LINC00173-203ENST00000480237 CCDC166P0CW27 439 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 MYL2P10916 166 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 HOXB2P14652 356 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 UGT1A6P19224 532 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 DRD4P21917 467 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 UGT1A1P22309 533 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 UGT1A4P22310 534 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 AKT1P31749 480 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 UGT1A3P35503 534 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 UGT1A5P35504 534 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 ETV3P41162 512 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 KIR2DL1P43626 348 aaPredicted RBP10.35□□□□□ -0.75
LINC00173-203ENST00000480237 CNTN1Q12860 1018 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 PCLAFQ15004 111 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 FAM83EQ2M2I3 478 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 ZNF284Q2VY69 593 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 TMEM196Q5HYL7 178 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 CTSL3PQ5NE16 218 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 AGAP9Q5VTM2 703 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 ZNF776Q68DI1 518 aaPredicted RBP10.35□□□□□ -0.75
LINC00173-203ENST00000480237 PTRHD1Q6GMV3 140 aaKnown RBP10.35□□□□□ -0.75
LINC00173-203ENST00000480237 LIPIQ6XZB0 460 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 RGS9BPQ6ZS82 235 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 RFLNAQ6ZTI6 216 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 ZNF771Q7L3S4 317 aaPredicted RBP10.35□□□□□ -0.75
LINC00173-203ENST00000480237 ZNF75CPQ92670 426 aaPredicted RBP10.35□□□□□ -0.75
LINC00173-203ENST00000480237 NXNL1Q96CM4 212 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 GUCD1Q96NT3 240 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 GPR21Q99679 349 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 UNKQ9C0B0 810 aaKnown RBP10.35□□□□□ -0.75
LINC00173-203ENST00000480237 RSPH9Q9H1X1 276 aaPredicted RBP10.35□□□□□ -0.75
LINC00173-203ENST00000480237 FAM83DQ9H4H8 585 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 MANSC1Q9H8J5 431 aa10.35□□□□□ -0.75
LINC00173-203ENST00000480237 NFKBIL1Q9UBC1 381 aaPredicted RBP10.35□□□□□ -0.75
LINC00173-203ENST00000480237 TRMT6Q9UJA5 497 aaKnown RBP10.35□□□□□ -0.75
LINC00173-203ENST00000480237 GOLGA4Q13439 2230 aaKnown RBP10.34□□□□□ -0.75
LINC00173-203ENST00000480237 PI4KAP42356 2102 aa10.34□□□□□ -0.75
LINC00173-203ENST00000480237 RGSL1A5PLK6 1076 aa10.34□□□□□ -0.75
LINC00173-203ENST00000480237 H0Y858 1186 aa10.34□□□□□ -0.75
LINC00173-203ENST00000480237 MID1O15344 667 aa10.34□□□□□ -0.75
LINC00173-203ENST00000480237 SPINT1O43278 529 aa10.34□□□□□ -0.75
LINC00173-203ENST00000480237 NARSO43776 548 aaKnown RBP10.34□□□□□ -0.75
LINC00173-203ENST00000480237 ZNF37AP17032 561 aaPredicted RBP10.34□□□□□ -0.75
LINC00173-203ENST00000480237 RPS3P23396 243 aaKnown RBP eCLIP10.34□□□□□ -0.75
LINC00173-203ENST00000480237 P2RY2P41231 377 aa10.34□□□□□ -0.75
LINC00173-203ENST00000480237 LIG3P49916 1009 aa10.34□□□□□ -0.75
LINC00173-203ENST00000480237 SATB1Q01826 763 aa10.34□□□□□ -0.75
LINC00173-203ENST00000480237 DLG1Q12959 904 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms