RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 KERAO60938 352 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 OR4F21O95013 312 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 EPOP01588 193 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 F11P03951 625 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 GALTP07902 379 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 CST5P28325 142 aaPredicted RBP10.72□□□□□ -0.69
VPS52-217ENST00000478934 IL12AP29459 219 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 SLC7A1P30825 629 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 ARL1P40616 181 aaPredicted RBP10.72□□□□□ -0.69
VPS52-217ENST00000478934 RANBP1P43487 201 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 ARF5P84085 180 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 RING1Q06587 406 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 LCP2Q13094 533 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 RBBP7Q16576 425 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 CHST15Q7LFX5 561 aaPredicted RBP10.72□□□□□ -0.69
VPS52-217ENST00000478934 TAS2R42Q7RTR8 314 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 TMCO2Q7Z6W1 182 aaPredicted RBP10.72□□□□□ -0.69
VPS52-217ENST00000478934 FBXO22Q8NEZ5 403 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 LINGO1Q96FE5 620 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 SCLYQ96I15 445 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 HGH1Q9BTY7 390 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 MUC3BQ9H195 1237 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 CCDC68Q9H2F9 335 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 DNMT3LQ9UJW3 386 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 NDUFAF1Q9Y375 327 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 CEPT1Q9Y6K0 416 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 ANKRD36A6QL64 1941 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 ZNF840PA6NDX5 716 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 KATNA1O75449 491 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 RHOCP08134 193 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 LBPP18428 481 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 CDH2P19022 906 aaPredicted RBP10.71□□□□□ -0.69
VPS52-217ENST00000478934 CR2P20023 1033 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 PAX3P23760 479 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 ZFP36L2P47974 494 aaKnown RBP10.71□□□□□ -0.69
VPS52-217ENST00000478934 TM4SF4P48230 202 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 ACADVLP49748 655 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 HTR6P50406 440 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 RAD51Q06609 339 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 SREBF2Q12772 1141 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 LRRC8DQ7L1W4 858 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 CARM1Q86X55 608 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 ZNF786Q8N393 782 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 RHEBL1Q8TAI7 183 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 LRRC58Q96CX6 371 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 FBXL20Q96IG2 436 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 ZFRQ96KR1 1074 aaKnown RBP10.71□□□□□ -0.69
VPS52-217ENST00000478934 SLC22A12Q96S37 553 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 STARD7Q9NQZ5 370 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 TLR9Q9NR96 1032 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 SMOXQ9NWM0 555 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 PTTG2Q9NZH5 202 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 FCF1Q9Y324 198 aaKnown RBP10.71□□□□□ -0.69
VPS52-217ENST00000478934 GPR45Q9Y5Y3 372 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 LCHNA4D1U4 455 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 KDELR3O43731 214 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 STC2O76061 302 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 RPLP2P05387 115 aaKnown RBP10.71□□□□□ -0.69
VPS52-217ENST00000478934 PYGLP06737 847 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 OGNP20774 298 aaKnown RBP10.71□□□□□ -0.69
VPS52-217ENST00000478934 PIK3CGP48736 1102 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 RPL26P61254 145 aaKnown RBP10.71□□□□□ -0.69
VPS52-217ENST00000478934 TWF1Q12792 350 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 ANKS6Q68DC2 871 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 OR2T34Q8NGX1 318 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 OR2T3Q8NH03 318 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 WFDC5Q8TCV5 224 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 CD200R1Q8TD46 325 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 PBXIP1Q96AQ6 731 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 SPATA17Q96L03 361 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 TTPALQ9BTX7 342 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 VN1R3Q9BXE9 311 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 DERL2Q9GZP9 239 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 MAGEH1Q9H213 219 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 PREBQ9HCU5 417 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 SDR39U1Q9NRG7 319 aaPredicted RBP10.71□□□□□ -0.69
VPS52-217ENST00000478934 INTS7Q9NVH2 962 aaKnown RBP10.71□□□□□ -0.69
VPS52-217ENST00000478934 PCTPQ9UKL6 214 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 DMTF1Q9Y222 760 aa10.71□□□□□ -0.69
VPS52-217ENST00000478934 FRMPD3Q5JV73 1810 aa10.71□□□□□ -0.7
VPS52-217ENST00000478934 ANKRD66B4E2M5 251 aa10.71□□□□□ -0.7
VPS52-217ENST00000478934 DLGAP1O14490 977 aa10.71□□□□□ -0.7
VPS52-217ENST00000478934 INPP4BO15327 924 aa10.71□□□□□ -0.7
VPS52-217ENST00000478934 H6PDO95479 791 aa10.71□□□□□ -0.7
VPS52-217ENST00000478934 PENKP01210 267 aaPredicted RBP10.71□□□□□ -0.7
VPS52-217ENST00000478934 YAP1P46937 504 aaKnown RBP10.71□□□□□ -0.7
VPS52-217ENST00000478934 MAPK10P53779 464 aa10.71□□□□□ -0.7
VPS52-217ENST00000478934 ERVPABLB-1P60509 514 aa10.71□□□□□ -0.7
VPS52-217ENST00000478934 TRAP1Q12931 704 aaKnown RBP10.71□□□□□ -0.7
VPS52-217ENST00000478934 TAF1AQ15573 450 aaPredicted RBP10.71□□□□□ -0.7
VPS52-217ENST00000478934 TIGD2Q4W5G0 525 aa10.71□□□□□ -0.7
VPS52-217ENST00000478934 ALG1LQ6GMV1 187 aa10.71□□□□□ -0.7
VPS52-217ENST00000478934 CXorf57Q6NSI4 855 aaKnown RBP10.71□□□□□ -0.7
VPS52-217ENST00000478934 BLOC1S3Q6QNY0 202 aa10.71□□□□□ -0.7
VPS52-217ENST00000478934 RALGPS2Q86X27 583 aaPredicted RBP10.71□□□□□ -0.7
VPS52-217ENST00000478934 TMEM126BQ8IUX1 230 aa10.71□□□□□ -0.7
VPS52-217ENST00000478934 CMTR2Q8IYT2 770 aaKnown RBP10.71□□□□□ -0.7
VPS52-217ENST00000478934 FIBCD1Q8N539 461 aa10.71□□□□□ -0.7
VPS52-217ENST00000478934 CLDN19Q8N6F1 224 aa10.71□□□□□ -0.7
VPS52-217ENST00000478934 PCYOX1LQ8NBM8 494 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms