RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 PRPSAP1Q14558 356 aa16.04■□□□□ 0.16
COL1A1-205ENST00000476387 MAP9Q49MG5 647 aa16.04■□□□□ 0.16
COL1A1-205ENST00000476387 TAF1BQ53T94 588 aaPredicted RBP16.04■□□□□ 0.16
COL1A1-205ENST00000476387 SIRPB2Q5JXA9 342 aa16.04■□□□□ 0.16
COL1A1-205ENST00000476387 ANKRD20A2Q5SQ80 823 aa16.04■□□□□ 0.16
COL1A1-205ENST00000476387 SEL1L2Q5TEA6 688 aa16.04■□□□□ 0.16
COL1A1-205ENST00000476387 ANKRD20A1Q5TYW2 823 aa16.04■□□□□ 0.16
COL1A1-205ENST00000476387 ANKRD20A3Q5VUR7 823 aa16.04■□□□□ 0.16
COL1A1-205ENST00000476387 SLC30A9Q6PML9 568 aa16.04■□□□□ 0.16
COL1A1-205ENST00000476387 CCDC81Q6ZN84 652 aa16.04■□□□□ 0.16
COL1A1-205ENST00000476387 TMC3Q7Z5M5 1100 aa16.04■□□□□ 0.16
COL1A1-205ENST00000476387 PIM3Q86V86 326 aa16.04■□□□□ 0.16
COL1A1-205ENST00000476387 JAMLQ86YT9 394 aa16.04■□□□□ 0.16
COL1A1-205ENST00000476387 PTCD2Q8WV60 388 aaKnown RBP16.04■□□□□ 0.16
COL1A1-205ENST00000476387 UBE2Q2Q8WVN8 375 aa16.04■□□□□ 0.16
COL1A1-205ENST00000476387 PPP1R2P1Q96PQ5 205 aa16.04■□□□□ 0.16
COL1A1-205ENST00000476387 ALS2CR12Q96Q35 445 aa16.04■□□□□ 0.16
COL1A1-205ENST00000476387 WDR24Q96S15 920 aa16.04■□□□□ 0.16
COL1A1-205ENST00000476387 CCNL2Q96S94 520 aaPredicted RBP16.04■□□□□ 0.16
COL1A1-205ENST00000476387 B3GNT4Q9C0J1 378 aa16.04■□□□□ 0.16
COL1A1-205ENST00000476387 VPS18Q9P253 973 aa16.04■□□□□ 0.16
COL1A1-205ENST00000476387 NFKBIL1Q9UBC1 381 aaPredicted RBP16.04■□□□□ 0.16
COL1A1-205ENST00000476387 PISDQ9UG56 409 aa16.04■□□□□ 0.16
COL1A1-205ENST00000476387 SPO11Q9Y5K1 396 aa16.04■□□□□ 0.16
COL1A1-205ENST00000476387 ST14Q9Y5Y6 855 aa16.04■□□□□ 0.16
COL1A1-205ENST00000476387 FADS2P1A8MWK0 482 aa16.03■□□□□ 0.16
COL1A1-205ENST00000476387 B4GAT1O43505 415 aa16.03■□□□□ 0.16
COL1A1-205ENST00000476387 PSMB4P28070 264 aa16.03■□□□□ 0.16
COL1A1-205ENST00000476387 CHRNA4P43681 627 aa16.03■□□□□ 0.16
COL1A1-205ENST00000476387 BIRC2Q13490 618 aa16.03■□□□□ 0.16
COL1A1-205ENST00000476387 SLC1A5Q15758 541 aa16.03■□□□□ 0.16
COL1A1-205ENST00000476387 PYCR3Q53H96 274 aa16.03■□□□□ 0.16
COL1A1-205ENST00000476387 PHF19Q5T6S3 580 aa16.03■□□□□ 0.16
COL1A1-205ENST00000476387 PDPK2PQ6A1A2 396 aa16.03■□□□□ 0.16
COL1A1-205ENST00000476387 TMPRSS9Q7Z410 1059 aa16.03■□□□□ 0.16
COL1A1-205ENST00000476387 GLT6D1Q7Z4J2 308 aa16.03■□□□□ 0.16
COL1A1-205ENST00000476387 LRRC8AQ8IWT6 810 aa16.03■□□□□ 0.16
COL1A1-205ENST00000476387 TRAM1L1Q8N609 369 aa16.03■□□□□ 0.16
COL1A1-205ENST00000476387 GPR26Q8NDV2 337 aa16.03■□□□□ 0.16
COL1A1-205ENST00000476387 BLOC1S5Q8TDH9 187 aa16.03■□□□□ 0.16
COL1A1-205ENST00000476387 TTC9Q92623 222 aa16.03■□□□□ 0.16
COL1A1-205ENST00000476387 LRRC45Q96CN5 670 aa16.03■□□□□ 0.16
COL1A1-205ENST00000476387 EID2BQ96D98 161 aa16.03■□□□□ 0.16
COL1A1-205ENST00000476387 SPATA13Q96N96 652 aa16.03■□□□□ 0.16
COL1A1-205ENST00000476387 FICDQ9BVA6 458 aa16.03■□□□□ 0.16
COL1A1-205ENST00000476387 AKAP7Q9P0M2 348 aaPredicted RBP16.03■□□□□ 0.16
COL1A1-205ENST00000476387 AAR2Q9Y312 384 aaKnown RBP16.03■□□□□ 0.16
COL1A1-205ENST00000476387 HGSO14964 777 aaPredicted RBP16.02■□□□□ 0.16
COL1A1-205ENST00000476387 ATP1A1P05023 1023 aaKnown RBP16.02■□□□□ 0.16
COL1A1-205ENST00000476387 LIPCP11150 499 aa16.02■□□□□ 0.16
COL1A1-205ENST00000476387 ACTR1BP42025 376 aa16.02■□□□□ 0.16
COL1A1-205ENST00000476387 OR1D5P58170 312 aa16.02■□□□□ 0.16
COL1A1-205ENST00000476387 ACTR1AP61163 376 aa16.02■□□□□ 0.16
COL1A1-205ENST00000476387 CFHR1Q03591 330 aa16.02■□□□□ 0.16
COL1A1-205ENST00000476387 SQSTM1Q13501 440 aa16.02■□□□□ 0.16
COL1A1-205ENST00000476387 ARHGEF18Q6ZSZ5 1173 aa16.02■□□□□ 0.16
COL1A1-205ENST00000476387 PHYKPLQ8IUZ5 450 aa16.02■□□□□ 0.16
COL1A1-205ENST00000476387 NAGSQ8N159 534 aa16.02■□□□□ 0.16
COL1A1-205ENST00000476387 ZNF843Q8N446 348 aa16.02■□□□□ 0.16
COL1A1-205ENST00000476387 CCDC110Q8TBZ0 833 aa16.02■□□□□ 0.16
COL1A1-205ENST00000476387 PLEKHG4BQ96PX9 1271 aa16.02■□□□□ 0.16
COL1A1-205ENST00000476387 DPYSL5Q9BPU6 564 aa16.02■□□□□ 0.16
COL1A1-205ENST00000476387 SEMA6CQ9H3T2 930 aa16.02■□□□□ 0.16
COL1A1-205ENST00000476387 RMI1Q9H9A7 625 aa16.02■□□□□ 0.16
COL1A1-205ENST00000476387 LZTFL1Q9NQ48 299 aa16.02■□□□□ 0.16
COL1A1-205ENST00000476387 ZNHIT2Q9UHR6 403 aa16.02■□□□□ 0.16
COL1A1-205ENST00000476387 CNOT6Q9ULM6 557 aaKnown RBP16.02■□□□□ 0.16
COL1A1-205ENST00000476387 OAS3Q9Y6K5 1087 aaKnown RBP16.02■□□□□ 0.16
COL1A1-205ENST00000476387 AURKAO14965 403 aa16.01■□□□□ 0.15
COL1A1-205ENST00000476387 SLC25A14O95258 325 aaPredicted RBP16.01■□□□□ 0.15
COL1A1-205ENST00000476387 BPIP17213 487 aa16.01■□□□□ 0.15
COL1A1-205ENST00000476387 ITIH1P19827 911 aa16.01■□□□□ 0.15
COL1A1-205ENST00000476387 CD82P27701 267 aa16.01■□□□□ 0.15
COL1A1-205ENST00000476387 CD1CP29017 333 aa16.01■□□□□ 0.15
COL1A1-205ENST00000476387 ALDH4A1P30038 563 aa16.01■□□□□ 0.15
COL1A1-205ENST00000476387 HMGCLP35914 325 aa16.01■□□□□ 0.15
COL1A1-205ENST00000476387 KLF1Q13351 362 aaPredicted RBP16.01■□□□□ 0.15
COL1A1-205ENST00000476387 TRA2AQ13595 282 aaKnown RBP eCLIP16.01■□□□□ 0.15
COL1A1-205ENST00000476387 AMZ1Q400G9 498 aa16.01■□□□□ 0.15
COL1A1-205ENST00000476387 ZDHHC20Q5W0Z9 365 aa16.01■□□□□ 0.15
COL1A1-205ENST00000476387 GLYATL1Q969I3 302 aa16.01■□□□□ 0.15
COL1A1-205ENST00000476387 NUDT22Q9BRQ3 303 aa16.01■□□□□ 0.15
COL1A1-205ENST00000476387 RDH14Q9HBH5 336 aa16.01■□□□□ 0.15
COL1A1-205ENST00000476387 BPIFA1Q9NP55 256 aa16.01■□□□□ 0.15
COL1A1-205ENST00000476387 PKP3Q9Y446 797 aa16.01■□□□□ 0.15
COL1A1-205ENST00000476387 PIEZO2Q9H5I5 2752 aa16.01■□□□□ 0.15
COL1A1-205ENST00000476387 PRAMEF33A0A0G2JMD5 474 aa16■□□□□ 0.15
COL1A1-205ENST00000476387 PPM1DO15297 605 aa16■□□□□ 0.15
COL1A1-205ENST00000476387 PRAMEF10O60809 474 aa16■□□□□ 0.15
COL1A1-205ENST00000476387 SPAM1P38567 509 aa16■□□□□ 0.15
COL1A1-205ENST00000476387 FASLGP48023 281 aa16■□□□□ 0.15
COL1A1-205ENST00000476387 CCZ1BP86790 482 aa16■□□□□ 0.15
COL1A1-205ENST00000476387 CCZ1P86791 482 aaPredicted RBP16■□□□□ 0.15
COL1A1-205ENST00000476387 C16orf72Q14CZ0 275 aa16■□□□□ 0.15
COL1A1-205ENST00000476387 RPS6KA1Q15418 735 aa16■□□□□ 0.15
COL1A1-205ENST00000476387 ZNF574Q6ZN55 896 aaPredicted RBP16■□□□□ 0.15
COL1A1-205ENST00000476387 CHST15Q7LFX5 561 aaPredicted RBP16■□□□□ 0.15
COL1A1-205ENST00000476387 TTC30BQ8N4P2 665 aa16■□□□□ 0.15
COL1A1-205ENST00000476387 OR4D9Q8NGE8 314 aa16■□□□□ 0.15
COL1A1-205ENST00000476387 PATE1Q8WXA2 126 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms