RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 GALNT3Q14435 633 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 ITIH4Q14624 930 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 CDKN3Q16667 212 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 DUOXA1Q1HG43 343 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 ZNF423Q2M1K9 1284 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 ZNF284Q2VY69 593 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 CCDC153Q494R4 210 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 TTC31Q49AM3 519 aaPredicted RBP6.98□□□□□ -1.29
SHQ1-207ENST00000475558 TMEM52BQ4KMG9 183 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 LYSMD4Q5XG99 296 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 ZNF776Q68DI1 518 aaPredicted RBP6.98□□□□□ -1.29
SHQ1-207ENST00000475558 FAM45BPQ6NSW5 357 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 TRMT10BQ6PF06 316 aaKnown RBP6.98□□□□□ -1.29
SHQ1-207ENST00000475558 CRTC1Q6UUV9 634 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 PACS1Q6VY07 963 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 KYAT3Q6YP21 454 aaKnown RBP6.98□□□□□ -1.29
SHQ1-207ENST00000475558 CAPN12Q6ZSI9 719 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 USP30Q70CQ3 517 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 ERN2Q76MJ5 926 aaKnown RBP6.98□□□□□ -1.29
SHQ1-207ENST00000475558 DPPA4Q7L190 304 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 ZNF765Q7L2R6 523 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 SNX20Q7Z614 316 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 RABEPKQ7Z6M1 372 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 EXOC3L1Q86VI1 746 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 C12orf40Q86WS4 652 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 PROSER1Q86XN7 944 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 CILP2Q8IUL8 1156 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 TMEFF1Q8IYR6 380 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 AGGF1Q8N302 714 aaeCLIP6.98□□□□□ -1.29
SHQ1-207ENST00000475558 TTC30BQ8N4P2 665 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 MDGA1Q8NFP4 955 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 OR4K2Q8NGD2 314 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 OR13J1Q8NGT2 312 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 FAM174AQ8TBP5 190 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 PIP4K2CQ8TBX8 421 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 FAM45AQ8TCE6 357 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 ZNF398Q8TD17 642 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 EPS8L3Q8TE67 593 aaKnown RBP6.98□□□□□ -1.29
SHQ1-207ENST00000475558 ASB12Q8WXK4 309 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 ISL2Q96A47 359 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 ARL8AQ96BM9 186 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 FAM129BQ96TA1 746 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 RBBP8Q99708 897 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 ZSCAN5AQ9BUG6 496 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 C1QTNF7Q9BXJ2 289 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 RSPH9Q9H1X1 276 aaPredicted RBP6.98□□□□□ -1.29
SHQ1-207ENST00000475558 VPS11Q9H270 941 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 FAM83DQ9H4H8 585 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 KCNK9Q9NPC2 374 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 PRSS16Q9NQE7 514 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 CATSPERZQ9NTU4 200 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 PSD3Q9NYI0 1048 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 EURLQ9NYK6 297 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 SLC6A14Q9UN76 642 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 ZNF711Q9Y462 761 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 ACTL7AQ9Y615 435 aa6.98□□□□□ -1.29
SHQ1-207ENST00000475558 ADAMTS20P59510 1910 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 ANAPC1Q9H1A4 1944 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 GLYATL1P3A0A0U1RQE8 302 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 SMIM23A6NLE4 172 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 TRIM49D1C9J1S8 452 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 KPNA3O00505 521 aaPredicted RBP6.97□□□□□ -1.29
SHQ1-207ENST00000475558 NEMP1O14524 444 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 COPEO14579 308 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 TOR1BO14657 336 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 WNT9AO14904 365 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 RRP9O43818 475 aaKnown RBP6.97□□□□□ -1.29
SHQ1-207ENST00000475558 BANF1O75531 89 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 SRP72O76094 671 aaKnown RBP6.97□□□□□ -1.29
SHQ1-207ENST00000475558 AP2A2O94973 939 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 GOT2P00505 430 aaKnown RBP6.97□□□□□ -1.29
SHQ1-207ENST00000475558 C1QAP02745 245 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 ESR1P03372 595 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 DNTTP04053 509 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 CFIP05156 583 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 ITGA2BP08514 1039 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 RBP1P09455 135 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 ACADMP11310 421 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 STMN1P16949 149 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 KRT4P19013 534 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 RPS3P23396 243 aaKnown RBP eCLIP6.97□□□□□ -1.29
SHQ1-207ENST00000475558 TEAD1P28347 426 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 OXTRP30559 389 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 MC4RP32245 332 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 NSG1P42857 185 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 CHRNA4P43681 627 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 MAPK9P45984 424 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 SPINT3P49223 89 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 SMCPP49901 116 aaPredicted RBP6.97□□□□□ -1.29
SHQ1-207ENST00000475558 SERPINB8P50452 374 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 ZNF140P52738 457 aaPredicted RBP6.97□□□□□ -1.29
SHQ1-207ENST00000475558 STC1P52823 247 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 KDSRQ06136 332 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 DPTQ07507 201 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 IHHQ14623 411 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 USP10Q14694 798 aaKnown RBP6.97□□□□□ -1.29
SHQ1-207ENST00000475558 AGERQ15109 404 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 TMED2Q15363 201 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 FAM83EQ2M2I3 478 aa6.97□□□□□ -1.29
SHQ1-207ENST00000475558 TYSND1Q2T9J0 566 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms