RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 ZNF623O75123 536 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 BCAS2O75934 225 aaPredicted RBP5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 APOA1P02647 267 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 H2AFB1P0C5Y9 115 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 H2AFB2P0C5Z0 115 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 MBL2P11226 248 aaPredicted RBP5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 IL7P13232 177 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 GYS1P13807 737 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 SLC5A1P13866 664 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 CYP11B1P15538 503 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 NPR1P16066 1061 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 YBX3P16989 372 aaKnown RBP eCLIP5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 NELFEP18615 380 aaKnown RBP5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 CYP2A7P20853 494 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 BGNP21810 368 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 MATN1P21941 496 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 ERP29P30040 261 aaKnown RBP5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 HLA-FP30511 346 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 DEFA1P59665 94 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 DEFA3P59666 94 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 MYL6P60660 151 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 FLI1Q01543 452 aaPredicted RBP5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 EGR3Q06889 387 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 INCA1Q0VD86 236 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 DBPQ10586 325 aaPredicted RBP5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 TFCP2Q12800 502 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 MORF4L2Q15014 288 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 IL17AQ16552 155 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 CARTPTQ16568 116 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 NRF1Q16656 503 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 HIST2H2ACQ16777 129 aaPredicted RBP5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 LDLRAP1Q5SW96 308 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 C10orf62Q5T681 223 aaPredicted RBP5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 SLC9A4Q6AI14 798 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 OR7E24Q6IFN5 339 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 CYP4F22Q6NT55 531 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 RETSATQ6NUM9 610 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 RINT1Q6NUQ1 792 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 TMEM65Q6PI78 240 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 MAMDC4Q6UXC1 1216 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 TRIM72Q6ZMU5 477 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 C16orf59Q7L2K0 433 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 UBQLNLQ8IYU4 475 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 POC5Q8NA72 575 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 CHST14Q8NCH0 376 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 KCNH5Q8NCM2 988 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 TMEM35BQ8NCS4 154 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 KIAA0895Q8NCT3 520 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 RHOXF1Q8NHV9 184 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 ZFAND1Q8TCF1 268 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 SEPT8Q92599 483 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 ST6GAL2Q96JF0 529 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 DACH2Q96NX9 599 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 CYP4F11Q9HBI6 524 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 IARS2Q9NSE4 1012 aaKnown RBP5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 TMEM216Q9P0N5 145 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 SLC17A7Q9P2U7 560 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 MAP3K2Q9Y2U5 619 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 GMPPBQ9Y5P6 360 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 ALG6Q9Y672 507 aa5.11□□□□□ -1.59
TMEM39A-206ENST00000473684 ANKRD36CQ5JPF3 1778 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 GMDSO60547 372 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 UGT2B11O75310 529 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 PSIP1O75475 530 aaKnown RBP5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 SORBS2O94875 1100 aaKnown RBP5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 SLC4A1P02730 911 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 PRKCBP05771 671 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 RALBP11234 206 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 ACADMP11310 421 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 KELP23276 732 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 GSK3AP49840 483 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 TPMTP51580 245 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 OR2B6P58173 313 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 BPIFB3P59826 476 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 RAB14P61106 215 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 ITKQ08881 620 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 MAPK11Q15759 364 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 KSR2Q6VAB6 950 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 DPY19L3Q6ZPD9 716 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 RHOUQ7L0Q8 258 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 TMPRSS9Q7Z410 1059 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 ADCK1Q86TW2 530 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 SLCO6A1Q86UG4 719 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 ZBTB46Q86UZ6 589 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 DGKHQ86XP1 1220 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 ZDHHC13Q8IUH4 622 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 ARHGEF19Q8IW93 802 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 NAT16Q8N8M0 369 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 OR8K5Q8NH50 307 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 WDR48Q8TAF3 677 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 BLOC1S5Q8TDH9 187 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 GANCQ8TET4 914 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 UFD1Q92890 307 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 PTP4A1Q93096 173 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 TOP1MTQ969P6 601 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 LRRC39Q96DD0 335 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 FAM167AQ96KS9 214 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 FCRL2Q96LA5 508 aaPredicted RBP5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 KLHL32Q96NJ5 620 aa5.1□□□□□ -1.59
TMEM39A-206ENST00000473684 TSGA13Q96PP4 275 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms