RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 TADA1Q96BN2 335 aa20.95■□□□□ 0.94
COL18A1-207ENST00000473212 PAIP1Q9H074 479 aaKnown RBP20.95■□□□□ 0.94
COL18A1-207ENST00000473212 TFB2MQ9H5Q4 396 aaKnown RBP20.95■□□□□ 0.94
COL18A1-207ENST00000473212 RNF112Q9ULX5 631 aa20.95■□□□□ 0.94
COL18A1-207ENST00000473212 GPR39O43194 453 aa20.95■□□□□ 0.94
COL18A1-207ENST00000473212 ZFP36L2P47974 494 aaKnown RBP20.95■□□□□ 0.94
COL18A1-207ENST00000473212 SUOXP51687 545 aa20.95■□□□□ 0.94
COL18A1-207ENST00000473212 NRG1Q02297 640 aaPredicted RBP20.95■□□□□ 0.94
COL18A1-207ENST00000473212 RCAN2Q14206 197 aa20.95■□□□□ 0.94
COL18A1-207ENST00000473212 DSC3Q14574 896 aa20.95■□□□□ 0.94
COL18A1-207ENST00000473212 TAF1CQ15572 869 aaPredicted RBP20.95■□□□□ 0.94
COL18A1-207ENST00000473212 PTRH1Q86Y79 214 aaKnown RBP20.95■□□□□ 0.94
COL18A1-207ENST00000473212 KIAA2013Q8IYS2 634 aa20.95■□□□□ 0.94
COL18A1-207ENST00000473212 PPP1R14BQ96C90 147 aa20.95■□□□□ 0.94
COL18A1-207ENST00000473212 PLEKHG4BQ96PX9 1271 aa20.95■□□□□ 0.94
COL18A1-207ENST00000473212 HBEGFQ99075 208 aa20.95■□□□□ 0.94
COL18A1-207ENST00000473212 DOK1Q99704 481 aa20.95■□□□□ 0.94
COL18A1-207ENST00000473212 GREB1Q4ZG55 1949 aa20.94■□□□□ 0.94
COL18A1-207ENST00000473212 ZSCAN9O15535 394 aaPredicted RBP20.94■□□□□ 0.94
COL18A1-207ENST00000473212 LDLRP01130 860 aa20.94■□□□□ 0.94
COL18A1-207ENST00000473212 IMPDH2P12268 514 aa20.94■□□□□ 0.94
COL18A1-207ENST00000473212 AKR1A1P14550 325 aa20.94■□□□□ 0.94
COL18A1-207ENST00000473212 PYCR3Q53H96 274 aa20.94■□□□□ 0.94
COL18A1-207ENST00000473212 XKR5Q6UX68 686 aa20.94■□□□□ 0.94
COL18A1-207ENST00000473212 TBC1D21Q8IYX1 336 aa20.94■□□□□ 0.94
COL18A1-207ENST00000473212 GIPC3Q8TF64 312 aa20.94■□□□□ 0.94
COL18A1-207ENST00000473212 AARSD1Q9BTE6 412 aaKnown RBP20.94■□□□□ 0.94
COL18A1-207ENST00000473212 INTS10Q9NVR2 710 aaKnown RBP20.94■□□□□ 0.94
COL18A1-207ENST00000473212 SCML2Q9UQR0 700 aa20.94■□□□□ 0.94
COL18A1-207ENST00000473212 CCDC154A6NI56 674 aa20.94■□□□□ 0.94
COL18A1-207ENST00000473212 MAPK10P53779 464 aa20.94■□□□□ 0.94
COL18A1-207ENST00000473212 SERINC3Q13530 473 aa20.94■□□□□ 0.94
COL18A1-207ENST00000473212 AAK1Q2M2I8 961 aa20.94■□□□□ 0.94
COL18A1-207ENST00000473212 NADSYN1Q6IA69 706 aa20.94■□□□□ 0.94
COL18A1-207ENST00000473212 TRIM74Q86UV6 250 aa20.94■□□□□ 0.94
COL18A1-207ENST00000473212 TRIM73Q86UV7 250 aa20.94■□□□□ 0.94
COL18A1-207ENST00000473212 OR4L1Q8NH43 312 aa20.94■□□□□ 0.94
COL18A1-207ENST00000473212 TBC1D15Q8TC07 691 aa20.94■□□□□ 0.94
COL18A1-207ENST00000473212 BIRC7Q96CA5 298 aa20.94■□□□□ 0.94
COL18A1-207ENST00000473212 C8orf4Q9NR00 106 aa20.94■□□□□ 0.94
COL18A1-207ENST00000473212 CATSPERZQ9NTU4 200 aa20.94■□□□□ 0.94
COL18A1-207ENST00000473212 INTS7Q9NVH2 962 aaKnown RBP20.94■□□□□ 0.94
COL18A1-207ENST00000473212 PKD2L2Q9NZM6 624 aa20.94■□□□□ 0.94
COL18A1-207ENST00000473212 NPEPPSL1A6NEC2 478 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 VPS4BO75351 444 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 ECI2O75521 394 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 TTKP33981 857 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 ACVR1Q04771 509 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 SPATS1Q496A3 300 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 TIGD2Q4W5G0 525 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 HABP4Q5JVS0 413 aaKnown RBP20.93■□□□□ 0.94
COL18A1-207ENST00000473212 C10orf120Q5SQS8 335 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 ACBD5Q5T8D3 534 aaPredicted RBP20.93■□□□□ 0.94
COL18A1-207ENST00000473212 RBM12BQ8IXT5 1001 aaKnown RBP20.93■□□□□ 0.94
COL18A1-207ENST00000473212 PAPD5Q8NDF8 572 aaKnown RBP20.93■□□□□ 0.94
COL18A1-207ENST00000473212 STAG3L4Q8TBR4 150 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 CDK15Q96Q40 435 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 CRISPLD1Q9H336 500 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 MUC13Q9H3R2 512 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 TRMT13Q9NUP7 481 aaKnown RBP20.93■□□□□ 0.94
COL18A1-207ENST00000473212 AIG1Q9NVV5 245 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 FNIP2Q9P278 1114 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 SLC12A8A0AV02 714 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 KERAO60938 352 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 EEDO75530 441 aaKnown RBP20.93■□□□□ 0.94
COL18A1-207ENST00000473212 SLC22A3O75751 556 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 RPP40O75818 363 aaKnown RBP20.93■□□□□ 0.94
COL18A1-207ENST00000473212 RHOBTB1O94844 696 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 C1RP00736 705 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 KCNQ1P51787 676 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 STC1P52823 247 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 ZIK1Q3SY52 487 aaPredicted RBP20.93■□□□□ 0.94
COL18A1-207ENST00000473212 OTUD3Q5T2D3 398 aaPredicted RBP20.93■□□□□ 0.94
COL18A1-207ENST00000473212 ANKS6Q68DC2 871 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 OGFOD2Q6N063 350 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 NANOGP8Q6NSW7 305 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 USP51Q70EK9 711 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 SPATA19Q7Z5L4 167 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 OR7D4Q8NG98 312 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 GPR150Q8NGU9 434 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 OR2T11Q8NH01 316 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 KIAA1191Q96A73 305 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 CDKN2AIPNLQ96HQ2 116 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 RNF145Q96MT1 663 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 NANOGQ9H9S0 305 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 TBCCD1Q9NVR7 557 aa20.93■□□□□ 0.94
COL18A1-207ENST00000473212 IFT80Q9P2H3 777 aaPredicted RBP20.93■□□□□ 0.94
COL18A1-207ENST00000473212 IGLV3-10A0A075B6K4 115 aa20.92■□□□□ 0.94
COL18A1-207ENST00000473212 B4GAT1O43505 415 aa20.92■□□□□ 0.94
COL18A1-207ENST00000473212 OR1I1O60431 355 aa20.92■□□□□ 0.94
COL18A1-207ENST00000473212 DUSP11O75319 330 aaKnown RBP20.92■□□□□ 0.94
COL18A1-207ENST00000473212 HRH2P25021 359 aa20.92■□□□□ 0.94
COL18A1-207ENST00000473212 POLR2IP36954 125 aaKnown RBP20.92■□□□□ 0.94
COL18A1-207ENST00000473212 NAA20P61599 178 aa20.92■□□□□ 0.94
COL18A1-207ENST00000473212 ADARB1P78563 741 aaKnown RBP20.92■□□□□ 0.94
COL18A1-207ENST00000473212 BNIP3Q12983 259 aa20.92■□□□□ 0.94
COL18A1-207ENST00000473212 SYVN1Q86TM6 617 aa20.92■□□□□ 0.94
COL18A1-207ENST00000473212 ZBTB46Q86UZ6 589 aa20.92■□□□□ 0.94
COL18A1-207ENST00000473212 COLGALT2Q8IYK4 626 aa20.92■□□□□ 0.94
COL18A1-207ENST00000473212 GPR21Q99679 349 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms