RNA–Protein interactions for RNA: ENST00000472863.5

HOXB3-207, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-207ENST00000472863 FGFR1OP2Q9NVK5 253 aa27.24■■□□□ 1.95
HOXB3-207ENST00000472863 NFKBIL1Q9UBC1 381 aaPredicted RBP27.24■■□□□ 1.95
HOXB3-207ENST00000472863 COPG2Q9UBF2 871 aa27.24■■□□□ 1.95
HOXB3-207ENST00000472863 PCDHB1Q9Y5F3 818 aa27.24■■□□□ 1.95
HOXB3-207ENST00000472863 PLXNA2O75051 1894 aa27.24■■□□□ 1.95
HOXB3-207ENST00000472863 CPA3P15088 417 aa27.23■■□□□ 1.95
HOXB3-207ENST00000472863 ZNF37AP17032 561 aaPredicted RBP27.23■■□□□ 1.95
HOXB3-207ENST00000472863 RPS3P23396 243 aaKnown RBP eCLIP27.23■■□□□ 1.955e-7■□□□□ 8.4
HOXB3-207ENST00000472863 FAM83EQ2M2I3 478 aa27.23■■□□□ 1.95
HOXB3-207ENST00000472863 PUS10Q3MIT2 529 aaKnown RBP27.23■■□□□ 1.95
HOXB3-207ENST00000472863 GPRC6AQ5T6X5 926 aa27.23■■□□□ 1.95
HOXB3-207ENST00000472863 PTRHD1Q6GMV3 140 aaKnown RBP27.23■■□□□ 1.95
HOXB3-207ENST00000472863 NRSN1Q8IZ57 195 aa27.23■■□□□ 1.95
HOXB3-207ENST00000472863 PELI3Q8N2H9 469 aa27.23■■□□□ 1.95
HOXB3-207ENST00000472863 TRAM1L1Q8N609 369 aa27.23■■□□□ 1.95
HOXB3-207ENST00000472863 COPS8Q99627 209 aa27.23■■□□□ 1.95
HOXB3-207ENST00000472863 SIRPGQ9P1W8 387 aa27.23■■□□□ 1.95
HOXB3-207ENST00000472863 COMMD10Q9Y6G5 202 aa27.23■■□□□ 1.95
HOXB3-207ENST00000472863 OAS3Q9Y6K5 1087 aaKnown RBP27.23■■□□□ 1.95
HOXB3-207ENST00000472863 G3V2L1 256 aa27.22■■□□□ 1.95
HOXB3-207ENST00000472863 BIRC5O15392 142 aa27.22■■□□□ 1.95
HOXB3-207ENST00000472863 LZTS3O60299 673 aaPredicted RBP27.22■■□□□ 1.95
HOXB3-207ENST00000472863 VPS26AO75436 327 aa27.22■■□□□ 1.95
HOXB3-207ENST00000472863 RNASEH2AO75792 299 aaKnown RBP27.22■■□□□ 1.95
HOXB3-207ENST00000472863 FAM107AO95990 144 aa27.22■■□□□ 1.95
HOXB3-207ENST00000472863 TSNAXIP1Q2TAA8 658 aa27.22■■□□□ 1.95
HOXB3-207ENST00000472863 ZNF284Q2VY69 593 aa27.22■■□□□ 1.95
HOXB3-207ENST00000472863 CES4AQ5XG92 561 aa27.22■■□□□ 1.95
HOXB3-207ENST00000472863 FAM47EQ6ZV65 393 aa27.22■■□□□ 1.95
HOXB3-207ENST00000472863 CPLX4Q7Z7G2 160 aa27.22■■□□□ 1.95
HOXB3-207ENST00000472863 C10orf107Q8IVU9 208 aa27.22■■□□□ 1.95
HOXB3-207ENST00000472863 GIMAP7Q8NHV1 300 aa27.22■■□□□ 1.95
HOXB3-207ENST00000472863 DTX3LQ8TDB6 740 aa27.22■■□□□ 1.95
HOXB3-207ENST00000472863 KCNJ9Q92806 393 aa27.22■■□□□ 1.95
HOXB3-207ENST00000472863 ULK4Q96C45 1275 aa27.22■■□□□ 1.95
HOXB3-207ENST00000472863 ZSCAN5AQ9BUG6 496 aa27.22■■□□□ 1.95
HOXB3-207ENST00000472863 SARS2Q9NP81 518 aaKnown RBP27.22■■□□□ 1.95
HOXB3-207ENST00000472863 E5RI56 91 aa27.22■■□□□ 1.95
HOXB3-207ENST00000472863 MTX2O75431 263 aa27.22■■□□□ 1.95
HOXB3-207ENST00000472863 ITGB6P18564 788 aa27.22■■□□□ 1.95
HOXB3-207ENST00000472863 FBXO43Q4G163 708 aa27.22■■□□□ 1.95
HOXB3-207ENST00000472863 AGAP9Q5VTM2 703 aa27.22■■□□□ 1.95
HOXB3-207ENST00000472863 CCDC91Q7Z6B0 441 aa27.22■■□□□ 1.95
HOXB3-207ENST00000472863 CXorf40AQ8TE69 158 aa27.22■■□□□ 1.95
HOXB3-207ENST00000472863 MSANTD3Q96H12 275 aa27.22■■□□□ 1.95
HOXB3-207ENST00000472863 XPR1Q9UBH6 696 aa27.22■■□□□ 1.95
HOXB3-207ENST00000472863 MBD1Q9UIS9 605 aaPredicted RBP27.22■■□□□ 1.95
HOXB3-207ENST00000472863 DUSP12Q9UNI6 340 aa27.22■■□□□ 1.95
HOXB3-207ENST00000472863 TARM1B6A8C7 271 aa27.21■■□□□ 1.95
HOXB3-207ENST00000472863 PYGLP06737 847 aa27.21■■□□□ 1.95
HOXB3-207ENST00000472863 SLC26A3P40879 764 aa27.21■■□□□ 1.95
HOXB3-207ENST00000472863 NSG1P42857 185 aa27.21■■□□□ 1.95
HOXB3-207ENST00000472863 ITIH4Q14624 930 aa27.21■■□□□ 1.95
HOXB3-207ENST00000472863 MLF2Q15773 248 aaPredicted RBP27.21■■□□□ 1.95
HOXB3-207ENST00000472863 CHI3L2Q15782 390 aa27.21■■□□□ 1.95
HOXB3-207ENST00000472863 TMEM92Q6UXU6 159 aa27.21■■□□□ 1.95
HOXB3-207ENST00000472863 CYP2U1Q7Z449 544 aa27.21■■□□□ 1.95
HOXB3-207ENST00000472863 LKAAEAR1Q8TD35 194 aa27.21■■□□□ 1.95
HOXB3-207ENST00000472863 CD200R1Q8TD46 325 aa27.21■■□□□ 1.95
HOXB3-207ENST00000472863 SMOXQ9NWM0 555 aa27.21■■□□□ 1.95
HOXB3-207ENST00000472863 FBXL12Q9NXK8 326 aa27.21■■□□□ 1.95
HOXB3-207ENST00000472863 GNPTGQ9UJJ9 305 aa27.21■■□□□ 1.95
HOXB3-207ENST00000472863 CA14Q9ULX7 337 aa27.21■■□□□ 1.95
HOXB3-207ENST00000472863 IGLV3-16A0A075B6K0 115 aa27.2■■□□□ 1.95
HOXB3-207ENST00000472863 NDUFAB1O14561 156 aa27.2■■□□□ 1.95
HOXB3-207ENST00000472863 CD9P21926 228 aa27.2■■□□□ 1.95
HOXB3-207ENST00000472863 CLCN7P51798 805 aa27.2■■□□□ 1.95
HOXB3-207ENST00000472863 CREB5Q02930 508 aa27.2■■□□□ 1.95
HOXB3-207ENST00000472863 SF3A3Q12874 501 aaKnown RBP eCLIP27.2■■□□□ 1.95
HOXB3-207ENST00000472863 ZCCHC23Q6ZST2 131 aa27.2■■□□□ 1.95
HOXB3-207ENST00000472863 GANCQ8TET4 914 aa27.2■■□□□ 1.95
HOXB3-207ENST00000472863 TRMT6Q9UJA5 497 aaKnown RBP27.2■■□□□ 1.95
HOXB3-207ENST00000472863 PIKFYVEQ9Y2I7 2098 aa27.2■■□□□ 1.94
HOXB3-207ENST00000472863 KHDC1Q4VXA5 237 aaKnown RBP27.2■■□□□ 1.94
HOXB3-207ENST00000472863 ZNF648Q5T619 568 aaPredicted RBP27.2■■□□□ 1.94
HOXB3-207ENST00000472863 MACC1Q6ZN28 852 aa27.2■■□□□ 1.94
HOXB3-207ENST00000472863 ZNF473Q8WTR7 871 aaKnown RBP27.2■■□□□ 1.94
HOXB3-207ENST00000472863 NUS1Q96E22 293 aa27.2■■□□□ 1.94
HOXB3-207ENST00000472863 SYTL2Q9HCH5 934 aa27.2■■□□□ 1.94
HOXB3-207ENST00000472863 H3BMM5 538 aa27.19■■□□□ 1.94
HOXB3-207ENST00000472863 K7ESM1 405 aa27.19■■□□□ 1.94
HOXB3-207ENST00000472863 ZBTB14O43829 449 aa27.19■■□□□ 1.94
HOXB3-207ENST00000472863 PCDH8O95206 1070 aa27.19■■□□□ 1.94
HOXB3-207ENST00000472863 TRIM16O95361 564 aa27.19■■□□□ 1.94
HOXB3-207ENST00000472863 DNTTP04053 509 aa27.19■■□□□ 1.94
HOXB3-207ENST00000472863 CD1DP15813 335 aa27.19■■□□□ 1.94
HOXB3-207ENST00000472863 ISCA2Q86U28 154 aa27.19■■□□□ 1.94
HOXB3-207ENST00000472863 RAVER1Q8IY67 606 aaKnown RBP27.19■■□□□ 1.94
HOXB3-207ENST00000472863 BTN2A2Q8WVV5 523 aa27.19■■□□□ 1.94
HOXB3-207ENST00000472863 SGF29Q96ES7 293 aa27.19■■□□□ 1.94
HOXB3-207ENST00000472863 MRPL57Q9BQC6 102 aaKnown RBP27.19■■□□□ 1.94
HOXB3-207ENST00000472863 MRPL46Q9H2W6 279 aaKnown RBP27.19■■□□□ 1.94
HOXB3-207ENST00000472863 FBRSQ9HAH7 460 aa27.19■■□□□ 1.94
HOXB3-207ENST00000472863 IGLON5A6NGN9 336 aa27.18■■□□□ 1.94
HOXB3-207ENST00000472863 AP1G1O43747 822 aa27.18■■□□□ 1.94
HOXB3-207ENST00000472863 SLC25A14O95258 325 aaPredicted RBP27.18■■□□□ 1.94
HOXB3-207ENST00000472863 APOA4P06727 396 aa27.18■■□□□ 1.94
HOXB3-207ENST00000472863 FGF3P11487 239 aaPredicted RBP27.18■■□□□ 1.94
HOXB3-207ENST00000472863 SKIV2L2P42285 1042 aaKnown RBP27.18■■□□□ 1.94
HOXB3-207ENST00000472863 KCNC1P48547 511 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms