RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 TYRP1P17643 537 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 F8A1P23610 371 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 RPL10P27635 214 aaKnown RBP7.98□□□□□ -1.13
USP48-207ENST00000471752 MAN1A1P33908 653 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 SLC19A1P41440 591 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 CDKN2BP42772 138 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 LEPRP48357 1165 aaKnown RBP7.98□□□□□ -1.13
USP48-207ENST00000471752 DRG2P55039 364 aaKnown RBP7.98□□□□□ -1.13
USP48-207ENST00000471752 UCNP55089 124 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 SH3BP2P78314 561 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 CDK18Q07002 472 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 EIF3IQ13347 325 aaKnown RBP7.98□□□□□ -1.13
USP48-207ENST00000471752 SQSTM1Q13501 440 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 SEPT7Q16181 437 aaKnown RBP7.98□□□□□ -1.13
USP48-207ENST00000471752 TAZQ16635 292 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 TSR1Q2NL82 804 aaKnown RBP7.98□□□□□ -1.13
USP48-207ENST00000471752 ATP13A5Q4VNC0 1218 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 KAZNQ674X7 775 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 AADACL2Q6P093 401 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 KDELC1Q6UW63 502 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 CERS6Q6ZMG9 384 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 FAM83HQ6ZRV2 1179 aaPredicted RBP7.98□□□□□ -1.13
USP48-207ENST00000471752 C11orf96Q7Z7L8 435 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 TTC30BQ8N4P2 665 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 SLC25A41Q8N5S1 370 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 OR4D9Q8NGE8 314 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 KRT35Q92764 455 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 SGF29Q96ES7 293 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 MED8Q96G25 268 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 TAAR9Q96RI9 348 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 CMKLR1Q99788 373 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 SPATA16Q9BXB7 569 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 HEMGNQ9BXL5 484 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 SLC12A9Q9BXP2 914 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 SLC25A51Q9H1U9 297 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 AKIRIN1Q9H9L7 192 aaPredicted RBP7.98□□□□□ -1.13
USP48-207ENST00000471752 SLC39A1Q9NY26 324 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.98□□□□□ -1.131e-13■■■□□ 14.6
USP48-207ENST00000471752 ALG6Q9Y672 507 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 MRPS18BQ9Y676 258 aaKnown RBP7.98□□□□□ -1.13
USP48-207ENST00000471752 DUSP10Q9Y6W6 482 aa7.98□□□□□ -1.13
USP48-207ENST00000471752 TEX15Q9BXT5 2789 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 SSU72P8A0A1W2PR75 194 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 OR52A4PA6NMU1 304 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 B8ZZF3 427 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 TMX2-CTNND1H3BSU7 103 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 APOL1O14791 398 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 CST8O60676 142 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 NFKB1P19838 968 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 CES1P23141 567 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 GPR3P46089 330 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 FASLGP48023 281 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 CTSCP53634 463 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 UBE2IP63279 158 aaKnown RBP7.97□□□□□ -1.13
USP48-207ENST00000471752 TPM4P67936 248 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 NFATC3Q12968 1075 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 PRKD1Q15139 912 aaPredicted RBP7.97□□□□□ -1.13
USP48-207ENST00000471752 KCTD19Q17RG1 926 aaPredicted RBP7.97□□□□□ -1.13
USP48-207ENST00000471752 TEX44Q53QW1 395 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 MANEAQ5SRI9 462 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 TIGD7Q6NT04 549 aaPredicted RBP7.97□□□□□ -1.13
USP48-207ENST00000471752 TMEM71Q6P5X7 295 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 SPOCD1Q6ZMY3 1216 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 NT5DC3Q86UY8 548 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 ZC3H18Q86VM9 953 aaKnown RBP7.97□□□□□ -1.13
USP48-207ENST00000471752 FAM129CQ86XR2 697 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 MAP7D3Q8IWC1 876 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 ZNF567Q8N184 647 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 TC2NQ8N9U0 490 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 WBP1Q96G27 269 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 MRGPRX2Q96LB1 330 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 TEKT5Q96M29 485 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 CCDC42Q96M95 316 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 SLC38A3Q99624 504 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 CDH19Q9H159 772 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 ZFYVE1Q9HBF4 777 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 IL26Q9NPH9 171 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 CPNE7Q9UBL6 633 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 PILRAQ9UKJ1 303 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 ZNF711Q9Y462 761 aa7.97□□□□□ -1.13
USP48-207ENST00000471752 USP9YO00507 2555 aaPredicted RBP7.97□□□□□ -1.13
USP48-207ENST00000471752 LOC285095A0A1B0GVY8 99 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 K7EM74 188 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 CCL22O00626 93 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 CHUKO15111 745 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 DDX3YO15523 660 aaKnown RBP7.96□□□□□ -1.14
USP48-207ENST00000471752 SLC25A14O95258 325 aaPredicted RBP7.96□□□□□ -1.14
USP48-207ENST00000471752 AGTP01019 485 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 F3P13726 295 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 ZNF7P17097 686 aaPredicted RBP7.96□□□□□ -1.14
USP48-207ENST00000471752 MX2P20592 715 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 MLLT3P42568 568 aaPredicted RBP7.96□□□□□ -1.14
USP48-207ENST00000471752 SEPHS1P49903 392 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 WNT3AP56704 352 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 RPL26P61254 145 aaKnown RBP7.96□□□□□ -1.14
USP48-207ENST00000471752 HHEXQ03014 270 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 BIRC2Q13490 618 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 PDK1Q15118 436 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 CHRNA6Q15825 494 aa7.96□□□□□ -1.14
USP48-207ENST00000471752 SIRPB2Q5JXA9 342 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms