RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 GDF7Q7Z4P5 450 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 PARP9Q8IXQ6 854 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 ZADH2Q8N4Q0 377 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 ARFGAP1Q8N6T3 406 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 AVL9Q8NBF6 648 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 CPLX3Q8WVH0 158 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 UBE2Q2Q8WVN8 375 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 NTAN1Q96AB6 310 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 CNDP1Q96KN2 507 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 LURAP1Q96LR2 239 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 OR2AG1Q9H205 316 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 CLSTN2Q9H4D0 955 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 NOD2Q9HC29 1040 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 SIX2Q9NPC8 291 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 WASH6PQ9NQA3 447 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 FGF21Q9NSA1 209 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 SCHIP1Q9P0W5 487 aaPredicted RBP6.77□□□□□ -1.33
HDAC1-204ENST00000471488 SH3BGRL2Q9UJC5 107 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 AP4E1Q9UPM8 1137 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 PCDHGB7Q9Y5F8 929 aa6.77□□□□□ -1.33
HDAC1-204ENST00000471488 IGHV5-51A0A0C4DH38 117 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 A0A1W2PQ67 120 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 SSU72P8A0A1W2PR75 194 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 OR5K4A6NMS3 321 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 OR52A4PA6NMU1 304 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 MASP2O00187 686 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 PSMD11O00231 422 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 LDB2O43679 373 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 DNAJC6O75061 913 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 SOCS5O75159 536 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 PGLSO95336 258 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 CLDN7O95471 211 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 ERCC2P18074 760 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 NELFEP18615 380 aaKnown RBP6.76□□□□□ -1.33
HDAC1-204ENST00000471488 SLC19A1P41440 591 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 CAPZBP47756 277 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 ARCN1P48444 511 aaKnown RBP6.76□□□□□ -1.33
HDAC1-204ENST00000471488 VAV2P52735 878 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 ACY1Q03154 408 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 DPTQ07507 201 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 IL10RBQ08334 325 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 NSUN2Q08J23 767 aaKnown RBP eCLIP6.76□□□□□ -1.33
HDAC1-204ENST00000471488 CDC16Q13042 620 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 GPS2Q13227 327 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 GPR18Q14330 331 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 VWA2Q5GFL6 755 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 DNTTIP2Q5QJE6 756 aaKnown RBP6.76□□□□□ -1.33
HDAC1-204ENST00000471488 VWA5B1Q5TIE3 1220 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 PRAMEF17Q5VTA0 474 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 PAPD7Q5XG87 772 aaKnown RBP6.76□□□□□ -1.33
HDAC1-204ENST00000471488 ARMC6Q6NXE6 501 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 MED25Q71SY5 747 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 TECPR1Q7Z6L1 1165 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 NXPE1Q8N323 547 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 NPWQ8N729 165 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 TMEM102Q8N9M5 508 aaPredicted RBP6.76□□□□□ -1.33
HDAC1-204ENST00000471488 CLEC1AQ8NC01 280 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 EPS8L1Q8TE68 723 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 SCRN2Q96FV2 425 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 SCARF2Q96GP6 870 aaPredicted RBP6.76□□□□□ -1.33
HDAC1-204ENST00000471488 ZNF514Q96K75 400 aaPredicted RBP6.76□□□□□ -1.33
HDAC1-204ENST00000471488 MAGEB10Q96LZ2 347 aaPredicted RBP6.76□□□□□ -1.33
HDAC1-204ENST00000471488 MLXIPLQ9NP71 852 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 NT5MQ9NPB1 228 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 NTNG1Q9Y2I2 539 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 ZDHHC9Q9Y397 364 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 HIVEP3Q5T1R4 2406 aa6.76□□□□□ -1.33
HDAC1-204ENST00000471488 ADGRG4Q8IZF6 3080 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 F8P00451 2351 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 C1orf232A0A0U1RR37 186 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 GTPBP10A4D1E9 387 aaKnown RBP6.75□□□□□ -1.33
HDAC1-204ENST00000471488 PEX12O00623 359 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 TOX3O15405 576 aaPredicted RBP6.75□□□□□ -1.33
HDAC1-204ENST00000471488 HTRA2O43464 458 aaPredicted RBP6.75□□□□□ -1.33
HDAC1-204ENST00000471488 MTX2O75431 263 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 SLC25A14O95258 325 aaPredicted RBP6.75□□□□□ -1.33
HDAC1-204ENST00000471488 RECKO95980 971 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 PYGLP06737 847 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 PDHA1P08559 390 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 ZNF8P17098 575 aaPredicted RBP6.75□□□□□ -1.33
HDAC1-204ENST00000471488 LPOP22079 712 aaPredicted RBP6.75□□□□□ -1.33
HDAC1-204ENST00000471488 MMP8P22894 467 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 PSMA2P25787 234 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 TEAD1P28347 426 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 CA5AP35218 305 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 HALP42357 657 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 MMP13P45452 471 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 UBE2IP63279 158 aaKnown RBP6.75□□□□□ -1.33
HDAC1-204ENST00000471488 PTSQ03393 145 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 RFTN1Q14699 578 aaPredicted RBP6.75□□□□□ -1.33
HDAC1-204ENST00000471488 HIF1AQ16665 826 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 CA9Q16790 459 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 PTCHD3Q3KNS1 767 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 ANO6Q4KMQ2 910 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 TMTC4Q5T4D3 741 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 MLIPQ5VWP3 458 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 LCN10Q6JVE6 187 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 FBXO38Q6PIJ6 1188 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 RFX8Q6ZV50 586 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 ARCQ7LC44 396 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms