RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 DIAPH2O60879 1101 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 LYPLA1O75608 230 aaPredicted RBP10.09□□□□□ -0.79
MSH5-213ENST00000468136 LEFTY1O75610 366 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 RASSF9O75901 435 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 ENO2P09104 434 aaPredicted RBP10.09□□□□□ -0.79
MSH5-213ENST00000468136 CHRM1P11229 460 aaPredicted RBP10.09□□□□□ -0.79
MSH5-213ENST00000468136 GFAPP14136 432 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 TIMP2P16035 220 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 PSMC3P17980 439 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 PBX2P40425 430 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 VIPR2P41587 438 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 GRIA2P42262 883 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 PIK3CGP48736 1102 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 PTSQ03393 145 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 SF3A3Q12874 501 aaKnown RBP eCLIP10.09□□□□□ -0.793e-6■■■■□ 24
MSH5-213ENST00000468136 RUNX3Q13761 415 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 HERC3Q15034 1050 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 CHRNA6Q15825 494 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 ARSIQ5FYB1 569 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 LDLRAP1Q5SW96 308 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 TMEM215Q68D42 235 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 NEK10Q6ZWH5 1172 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 GET4Q7L5D6 327 aaPredicted RBP10.09□□□□□ -0.79
MSH5-213ENST00000468136 SPRED2Q7Z698 418 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 GPSM1Q86YR5 675 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 C10orf67Q8IYJ2 551 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 TCAIMQ8N3R3 496 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 CPSF7Q8N684 471 aaKnown RBP10.09□□□□□ -0.79
MSH5-213ENST00000468136 NAT16Q8N8M0 369 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 TERB1Q8NA31 727 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 CEP70Q8NHQ1 597 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 KCNV2Q8TDN2 545 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 VOPP1Q96AW1 172 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 EID2BQ96D98 161 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 PTCD3Q96EY7 689 aaKnown RBP10.09□□□□□ -0.79
MSH5-213ENST00000468136 DCUN1D1Q96GG9 259 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 MAELQ96JY0 434 aaKnown RBP10.09□□□□□ -0.79
MSH5-213ENST00000468136 VPS35Q96QK1 796 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 BTBD10Q9BSF8 475 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 CCDC106Q9BWC9 280 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 NUSAP1Q9BXS6 441 aaKnown RBP10.09□□□□□ -0.79
MSH5-213ENST00000468136 FAM126AQ9BYI3 521 aaPredicted RBP10.09□□□□□ -0.79
MSH5-213ENST00000468136 NMUR2Q9GZQ4 415 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 EPHX3Q9H6B9 360 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 FBRSQ9HAH7 460 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 RDH14Q9HBH5 336 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 DYRK4Q9NR20 520 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 NDE1Q9NXR1 346 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 FAM50BQ9Y247 325 aa10.09□□□□□ -0.79
MSH5-213ENST00000468136 TMEM265A0A087WTH1 108 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 C16orf96A6NNT2 1141 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 TTC34A8MYJ7 566 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 SUPT3HB4E1H0 165 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 SLC16A5O15375 505 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 BNIP3LO60238 219 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 SUPT3HO75486 399 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 WFS1O76024 890 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 SUPT7LO94864 414 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 TSPAN12O95859 305 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 CHEK2O96017 543 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 FTH1P02794 183 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 APODP05090 189 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 MPC1LP0DKB6 136 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 T-ENOLP0DO92 83 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 FCARP24071 287 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 ATP4BP51164 291 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 PKNOX1P55347 436 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 CDKL1Q00532 357 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 CREB5Q02930 508 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 LCP2Q13094 533 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 SP140Q13342 867 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 ADAM15Q13444 863 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 TUBB3Q13509 450 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 MAPRE2Q15555 327 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 HSF5Q4G112 596 aaPredicted RBP10.08□□□□□ -0.8
MSH5-213ENST00000468136 FNDC3BQ53EP0 1204 aaKnown RBP10.08□□□□□ -0.8
MSH5-213ENST00000468136 SETMARQ53H47 684 aaPredicted RBP10.08□□□□□ -0.8
MSH5-213ENST00000468136 PLEKHS1Q5SXH7 462 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 GPRC6AQ5T6X5 926 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 SYCE2Q6PIF2 218 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 FRA10AC1Q70Z53 315 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 TTC7BQ86TV6 843 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 CUZD1Q86UP6 607 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 PIM3Q86V86 326 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 ZSWIM9Q86XI8 627 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 LSMEM2Q8N112 164 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 ZBTB2Q8N680 514 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 PTGR2Q8N8N7 351 aaPredicted RBP10.08□□□□□ -0.8
MSH5-213ENST00000468136 CHST14Q8NCH0 376 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 SUSD6Q92537 303 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 FUBP1Q96AE4 644 aaKnown RBP10.08□□□□□ -0.8
MSH5-213ENST00000468136 PTERQ96BW5 349 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 RSPRY1Q96DX4 576 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 LINGO1Q96FE5 620 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 MAGEB10Q96LZ2 347 aaPredicted RBP10.08□□□□□ -0.8
MSH5-213ENST00000468136 LRRC3BQ96PB8 259 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 TRIM54Q9BYV2 358 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 ZCCHC2Q9C0B9 1178 aaKnown RBP10.08□□□□□ -0.8
MSH5-213ENST00000468136 EBF3Q9H4W6 596 aa10.08□□□□□ -0.8
MSH5-213ENST00000468136 GSTO2Q9H4Y5 243 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms