RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 VEGFDO43915 354 aa18.86■□□□□ 0.61
COL7A1-207ENST00000467985 ZNF189O75820 626 aaPredicted RBP18.86■□□□□ 0.61
COL7A1-207ENST00000467985 ZNF8P17098 575 aaPredicted RBP18.86■□□□□ 0.61
COL7A1-207ENST00000467985 BPIP17213 487 aa18.86■□□□□ 0.61
COL7A1-207ENST00000467985 HLA-DPA1P20036 260 aa18.86■□□□□ 0.61
COL7A1-207ENST00000467985 ATP5OP48047 213 aa18.86■□□□□ 0.61
COL7A1-207ENST00000467985 LIMK2P53671 638 aa18.86■□□□□ 0.61
COL7A1-207ENST00000467985 VAC14Q08AM6 782 aa18.86■□□□□ 0.61
COL7A1-207ENST00000467985 KIR2DS5Q14953 304 aa18.86■□□□□ 0.61
COL7A1-207ENST00000467985 SIRPB2Q5JXA9 342 aa18.86■□□□□ 0.61
COL7A1-207ENST00000467985 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.86■□□□□ 0.61
COL7A1-207ENST00000467985 IYDQ6PHW0 289 aa18.86■□□□□ 0.61
COL7A1-207ENST00000467985 SLC9B2Q86UD5 537 aa18.86■□□□□ 0.61
COL7A1-207ENST00000467985 OR10G6Q8NH81 332 aa18.86■□□□□ 0.61
COL7A1-207ENST00000467985 DTX3LQ8TDB6 740 aa18.86■□□□□ 0.61
COL7A1-207ENST00000467985 SNRNP27Q8WVK2 155 aaKnown RBP18.86■□□□□ 0.61
COL7A1-207ENST00000467985 AHCYL2Q96HN2 611 aaKnown RBP18.86■□□□□ 0.61
COL7A1-207ENST00000467985 BBC3Q96PG8 261 aaPredicted RBP18.86■□□□□ 0.61
COL7A1-207ENST00000467985 VPS35Q96QK1 796 aa18.86■□□□□ 0.61
COL7A1-207ENST00000467985 CPNE5Q9HCH3 593 aa18.86■□□□□ 0.61
COL7A1-207ENST00000467985 RSPH14Q9UHP6 348 aa18.86■□□□□ 0.61
COL7A1-207ENST00000467985 KCNK6Q9Y257 313 aa18.86■□□□□ 0.61
COL7A1-207ENST00000467985 PCYT1BQ9Y5K3 369 aaPredicted RBP18.86■□□□□ 0.61
COL7A1-207ENST00000467985 ADGRG1Q9Y653 693 aa18.86■□□□□ 0.61
COL7A1-207ENST00000467985 A6NCN8 305 aa18.85■□□□□ 0.61
COL7A1-207ENST00000467985 KMOO15229 486 aa18.85■□□□□ 0.61
COL7A1-207ENST00000467985 PJA2O43164 708 aa18.85■□□□□ 0.61
COL7A1-207ENST00000467985 DUX1O43812 170 aa18.85■□□□□ 0.61
COL7A1-207ENST00000467985 ANXA9O76027 345 aa18.85■□□□□ 0.61
COL7A1-207ENST00000467985 F3P13726 295 aa18.85■□□□□ 0.61
COL7A1-207ENST00000467985 VAV2P52735 878 aa18.85■□□□□ 0.61
COL7A1-207ENST00000467985 RWDD2BP57060 319 aa18.85■□□□□ 0.61
COL7A1-207ENST00000467985 RHDQ02161 417 aa18.85■□□□□ 0.61
COL7A1-207ENST00000467985 HHEXQ03014 270 aa18.85■□□□□ 0.61
COL7A1-207ENST00000467985 CLN3Q13286 438 aa18.85■□□□□ 0.61
COL7A1-207ENST00000467985 C16orf72Q14CZ0 275 aa18.85■□□□□ 0.61
COL7A1-207ENST00000467985 NOMO1Q15155 1222 aa18.85■□□□□ 0.61
COL7A1-207ENST00000467985 SLC1A5Q15758 541 aa18.85■□□□□ 0.61
COL7A1-207ENST00000467985 TMEM164Q5U3C3 297 aa18.85■□□□□ 0.61
COL7A1-207ENST00000467985 ITPRIPL1Q6GPH6 555 aa18.85■□□□□ 0.61
COL7A1-207ENST00000467985 ZNF574Q6ZN55 896 aaPredicted RBP18.85■□□□□ 0.61
COL7A1-207ENST00000467985 ADGRG6Q86SQ4 1221 aa18.85■□□□□ 0.61
COL7A1-207ENST00000467985 CDKL3Q8IVW4 592 aaPredicted RBP18.85■□□□□ 0.61
COL7A1-207ENST00000467985 CCDC112Q8NEF3 446 aa18.85■□□□□ 0.61
COL7A1-207ENST00000467985 OXNAD1Q96HP4 312 aaPredicted RBP18.85■□□□□ 0.61
COL7A1-207ENST00000467985 MRGPRX2Q96LB1 330 aa18.85■□□□□ 0.61
COL7A1-207ENST00000467985 CCDC74BQ96LY2 380 aa18.85■□□□□ 0.61
COL7A1-207ENST00000467985 FSD1LQ9BXM9 530 aa18.85■□□□□ 0.61
COL7A1-207ENST00000467985 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.85■□□□□ 0.61
COL7A1-207ENST00000467985 OSBPL8Q9BZF1 889 aa18.85■□□□□ 0.61
COL7A1-207ENST00000467985 DUSP10Q9Y6W6 482 aa18.85■□□□□ 0.61
COL7A1-207ENST00000467985 PIEZO2Q9H5I5 2752 aa18.84■□□□□ 0.61
COL7A1-207ENST00000467985 TRBV23OR9-2A0A075B6M9 112 aa18.84■□□□□ 0.61
COL7A1-207ENST00000467985 AURKAO14965 403 aa18.84■□□□□ 0.61
COL7A1-207ENST00000467985 SNX2O60749 519 aa18.84■□□□□ 0.61
COL7A1-207ENST00000467985 PPFIA2O75334 1257 aa18.84■□□□□ 0.61
COL7A1-207ENST00000467985 STK10O94804 968 aaKnown RBP18.84■□□□□ 0.61
COL7A1-207ENST00000467985 EML2O95834 649 aa18.84■□□□□ 0.61
COL7A1-207ENST00000467985 LIPCP11150 499 aa18.84■□□□□ 0.61
COL7A1-207ENST00000467985 ITIH1P19827 911 aa18.84■□□□□ 0.61
COL7A1-207ENST00000467985 CTNNA2P26232 953 aa18.84■□□□□ 0.61
COL7A1-207ENST00000467985 CD82P27701 267 aa18.84■□□□□ 0.61
COL7A1-207ENST00000467985 EPHA4P54764 986 aa18.84■□□□□ 0.61
COL7A1-207ENST00000467985 ARHGAP40Q5TG30 622 aa18.84■□□□□ 0.61
COL7A1-207ENST00000467985 NKAIN2Q5VXU1 208 aa18.84■□□□□ 0.61
COL7A1-207ENST00000467985 TMEM71Q6P5X7 295 aa18.84■□□□□ 0.61
COL7A1-207ENST00000467985 RAD9BQ6WBX8 426 aa18.84■□□□□ 0.61
COL7A1-207ENST00000467985 CCDC81Q6ZN84 652 aa18.84■□□□□ 0.61
COL7A1-207ENST00000467985 KIAA1328Q86T90 577 aa18.84■□□□□ 0.61
COL7A1-207ENST00000467985 LRRTM4Q86VH4 590 aa18.84■□□□□ 0.61
COL7A1-207ENST00000467985 SLC25A41Q8N5S1 370 aa18.84■□□□□ 0.61
COL7A1-207ENST00000467985 AGBL5Q8NDL9 886 aa18.84■□□□□ 0.61
COL7A1-207ENST00000467985 IPMKQ8NFU5 416 aa18.84■□□□□ 0.61
COL7A1-207ENST00000467985 CCNL2Q96S94 520 aaPredicted RBP18.84■□□□□ 0.61
COL7A1-207ENST00000467985 BAG1Q99933 345 aaPredicted RBP18.84■□□□□ 0.61
COL7A1-207ENST00000467985 TIMM29Q9BSF4 260 aa18.84■□□□□ 0.61
COL7A1-207ENST00000467985 ZMYND15Q9H091 742 aa18.84■□□□□ 0.61
COL7A1-207ENST00000467985 GBA3Q9H227 469 aa18.84■□□□□ 0.61
COL7A1-207ENST00000467985 EPB41L1Q9H4G0 881 aa18.84■□□□□ 0.61
COL7A1-207ENST00000467985 ARFGAP3Q9NP61 516 aa18.84■□□□□ 0.61
COL7A1-207ENST00000467985 KLC4Q9NSK0 619 aa18.84■□□□□ 0.61
COL7A1-207ENST00000467985 REXO2Q9Y3B8 237 aaKnown RBP18.84■□□□□ 0.61
COL7A1-207ENST00000467985 PRAMEF33A0A0G2JMD5 474 aa18.83■□□□□ 0.6
COL7A1-207ENST00000467985 ERVH48-1M5A8F1 160 aa18.83■□□□□ 0.6
COL7A1-207ENST00000467985 PRAMEF10O60809 474 aa18.83■□□□□ 0.6
COL7A1-207ENST00000467985 CDK14O94921 469 aa18.83■□□□□ 0.6
COL7A1-207ENST00000467985 TJP3O95049 919 aa18.83■□□□□ 0.6
COL7A1-207ENST00000467985 RBL1P28749 1068 aa18.83■□□□□ 0.6
COL7A1-207ENST00000467985 PPM1FP49593 454 aaPredicted RBP18.83■□□□□ 0.6
COL7A1-207ENST00000467985 MAPK10P53779 464 aa18.83■□□□□ 0.6
COL7A1-207ENST00000467985 GEMP55040 296 aa18.83■□□□□ 0.6
COL7A1-207ENST00000467985 INSCQ1MX18 579 aa18.83■□□□□ 0.6
COL7A1-207ENST00000467985 WDR74Q6RFH5 385 aaPredicted RBP18.83■□□□□ 0.6
COL7A1-207ENST00000467985 GLT6D1Q7Z4J2 308 aa18.83■□□□□ 0.6
COL7A1-207ENST00000467985 TTC30BQ8N4P2 665 aa18.83■□□□□ 0.6
COL7A1-207ENST00000467985 LRRC57Q8N9N7 239 aa18.83■□□□□ 0.6
COL7A1-207ENST00000467985 ACTL9Q8TC94 416 aa18.83■□□□□ 0.6
COL7A1-207ENST00000467985 BRSK1Q8TDC3 778 aa18.83■□□□□ 0.6
COL7A1-207ENST00000467985 USP7Q93009 1102 aa18.83■□□□□ 0.6
COL7A1-207ENST00000467985 PPP1R2P1Q96PQ5 205 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms