RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 SPATA6LQ8N4H0 392 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 ING5Q8WYH8 240 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 MTMR8Q96EF0 704 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 FCRL2Q96LA5 508 aaPredicted RBP8.66□□□□□ -1.02
HPS4-209ENST00000466781 GPN1Q9HCN4 374 aaPredicted RBP8.66□□□□□ -1.02
HPS4-209ENST00000466781 FANCFQ9NPI8 374 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 SEC14L3Q9UDX4 400 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 C10orf71Q711Q0 1435 aa8.66□□□□□ -1.02
HPS4-209ENST00000466781 FPGTO14772 594 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 STBD1O95210 358 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 UGT2B4P06133 528 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 PTPN2P17706 415 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 CCKBRP32239 447 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 RFC2P35250 354 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 GTF2BQ00403 316 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 CACNG1Q06432 222 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 RIPK1Q13546 671 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 GALNTL5Q7Z4T8 443 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 LRRC52Q8N7C0 313 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 ANKFN1Q8N957 763 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 OR2AJ1Q8NGZ0 328 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 PIWIL2Q8TC59 973 aaKnown RBP8.65□□□□□ -1.02
HPS4-209ENST00000466781 GDF3Q9NR23 364 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 SORCS3Q9UPU3 1222 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 SAMD4AQ9UPU9 718 aaKnown RBP8.65□□□□□ -1.02
HPS4-209ENST00000466781 PCDHGB5Q9Y5G0 923 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 SEC24AO95486 1093 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 CBX6O95503 412 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 NR2F6P10588 404 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 CTSOP43234 321 aaPredicted RBP8.65□□□□□ -1.02
HPS4-209ENST00000466781 PPP3R1P63098 170 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 CAP1Q01518 475 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 ITGB3BPQ13352 177 aaPredicted RBP8.65□□□□□ -1.02
HPS4-209ENST00000466781 PPP1R26Q5T8A7 1209 aaPredicted RBP8.65□□□□□ -1.02
HPS4-209ENST00000466781 LRRC38Q5VT99 294 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 AADACL2Q6P093 401 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 LACRTQ9GZZ8 138 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 CD84Q9UIB8 345 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 ARHGEF33A8MVX0 844 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 G3V2T6 193 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 PLOD3O60568 738 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 LRIG2O94898 1065 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 PSMG1O95456 288 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 RPIAP49247 311 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 TRAP1Q12931 704 aaKnown RBP8.65□□□□□ -1.02
HPS4-209ENST00000466781 DLG1Q12959 904 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 TAF10Q12962 218 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 CTBP1Q13363 440 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 KCTD19Q17RG1 926 aaPredicted RBP8.65□□□□□ -1.02
HPS4-209ENST00000466781 COLEC12Q5KU26 742 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 NAIF1Q69YI7 327 aaPredicted RBP8.65□□□□□ -1.02
HPS4-209ENST00000466781 TTC27Q6P3X3 843 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 CNKSR3Q6P9H4 555 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 ZCCHC10Q8TBK6 192 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 ACMSDQ8TDX5 336 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 CAPSLQ8WWF8 208 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 KLHL5Q96PQ7 755 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 EBNA1BP2Q99848 306 aaKnown RBP8.65□□□□□ -1.02
HPS4-209ENST00000466781 C11orf84Q9BUA3 381 aaPredicted RBP8.65□□□□□ -1.02
HPS4-209ENST00000466781 PLGRKTQ9HBL7 147 aa8.65□□□□□ -1.02
HPS4-209ENST00000466781 EVLQ9UI08 416 aaPredicted RBP8.65□□□□□ -1.02
HPS4-209ENST00000466781 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.65□□□□□ -1.02
HPS4-209ENST00000466781 RIIAD1A6NNX1 92 aa8.65□□□□□ -1.03
HPS4-209ENST00000466781 CASKO14936 926 aa8.65□□□□□ -1.03
HPS4-209ENST00000466781 SLC22A3O75751 556 aa8.65□□□□□ -1.03
HPS4-209ENST00000466781 C1RP00736 705 aa8.65□□□□□ -1.03
HPS4-209ENST00000466781 SLC10A3P09131 477 aa8.65□□□□□ -1.03
HPS4-209ENST00000466781 CYP4B1P13584 511 aa8.65□□□□□ -1.03
HPS4-209ENST00000466781 IFI35P80217 286 aaPredicted RBP8.65□□□□□ -1.03
HPS4-209ENST00000466781 ZNF844Q08AG5 666 aa8.65□□□□□ -1.03
HPS4-209ENST00000466781 C2orf80Q0P641 193 aa8.65□□□□□ -1.03
HPS4-209ENST00000466781 PRKG2Q13237 762 aa8.65□□□□□ -1.03
HPS4-209ENST00000466781 NUP54Q7Z3B4 507 aa8.65□□□□□ -1.03
HPS4-209ENST00000466781 C12orf56Q8IXR9 622 aa8.65□□□□□ -1.03
HPS4-209ENST00000466781 SMPDL3BQ92485 455 aa8.65□□□□□ -1.03
HPS4-209ENST00000466781 TESCQ96BS2 214 aa8.65□□□□□ -1.03
HPS4-209ENST00000466781 DHRS1Q96LJ7 313 aa8.65□□□□□ -1.03
HPS4-209ENST00000466781 DUSP9Q99956 384 aaKnown RBP8.65□□□□□ -1.03
HPS4-209ENST00000466781 PRDM12Q9H4Q4 367 aa8.65□□□□□ -1.03
HPS4-209ENST00000466781 PLK2Q9NYY3 685 aa8.65□□□□□ -1.03
HPS4-209ENST00000466781 CDH7Q9ULB5 785 aa8.65□□□□□ -1.03
HPS4-209ENST00000466781 TEX46H3BTG2 121 aa8.65□□□□□ -1.03
HPS4-209ENST00000466781 CFIP05156 583 aa8.65□□□□□ -1.03
HPS4-209ENST00000466781 ITGB5P18084 799 aa8.65□□□□□ -1.03
HPS4-209ENST00000466781 DDX6P26196 483 aaKnown RBP eCLIP8.65□□□□□ -1.03
HPS4-209ENST00000466781 GNALP38405 381 aa8.65□□□□□ -1.03
HPS4-209ENST00000466781 ASMTP46597 345 aa8.65□□□□□ -1.03
HPS4-209ENST00000466781 GAD2Q05329 585 aa8.65□□□□□ -1.03
HPS4-209ENST00000466781 RNASE12Q5GAN4 147 aaKnown RBP8.65□□□□□ -1.03
HPS4-209ENST00000466781 VITQ6UXI7 678 aa8.65□□□□□ -1.03
HPS4-209ENST00000466781 KCTD8Q6ZWB6 473 aa8.65□□□□□ -1.03
HPS4-209ENST00000466781 ZNF296Q8WUU4 475 aaPredicted RBP8.65□□□□□ -1.03
HPS4-209ENST00000466781 LCN9Q8WX39 176 aa8.65□□□□□ -1.03
HPS4-209ENST00000466781 NXF3Q9H4D5 531 aaKnown RBP8.65□□□□□ -1.03
HPS4-209ENST00000466781 IFT46Q9NQC8 304 aa8.65□□□□□ -1.03
HPS4-209ENST00000466781 LRCH1Q9Y2L9 728 aa8.65□□□□□ -1.03
HPS4-209ENST00000466781 ASTN1O14525 1302 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 AP5Z1O43299 807 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 B3GALT2O43825 422 aa8.64□□□□□ -1.03
HPS4-209ENST00000466781 TRIM3O75382 744 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms