RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 RHOAP61586 193 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 DSC2Q02487 901 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 ACVR1Q04771 509 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 RAD51Q06609 339 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 ITKQ08881 620 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 GPS2Q13227 327 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 NAB1Q13506 487 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 DLG2Q15700 870 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 SLC1A5Q15758 541 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 KYNUQ16719 465 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 GEN1Q17RS7 908 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 MYLK3Q32MK0 819 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 FUT11Q495W5 492 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 DGKKQ5KSL6 1271 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 FAXCQ5TGI0 409 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 EMC10Q5UCC4 262 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 YOD1Q5VVQ6 348 aaPredicted RBP5.5□□□□□ -1.53
VPS41-211ENST00000466017 TMEM215Q68D42 235 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 DENND2CQ68D51 928 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 GRAMD4Q6IC98 578 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 PKN3Q6P5Z2 889 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 RALGPS2Q86X27 583 aaPredicted RBP5.5□□□□□ -1.53
VPS41-211ENST00000466017 ZNF354CQ86Y25 554 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 GSPT2Q8IYD1 628 aaKnown RBP5.5□□□□□ -1.53
VPS41-211ENST00000466017 ZBED8Q8IZ13 594 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 SLC44A3Q8N4M1 653 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 ATP11CQ8NB49 1132 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 TMEM145Q8NBT3 493 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 FBXO36Q8NEA4 188 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 OR52K1Q8NGK4 314 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 SPATA22Q8NHS9 363 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 GSDMBQ8TAX9 411 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 DTX3LQ8TDB6 740 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 BRSK1Q8TDC3 778 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 MZB1Q8WU39 189 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 STYXQ8WUJ0 223 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 UCMAQ8WVF2 138 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 PTPRN2Q92932 1015 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 VOPP1Q96AW1 172 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 PGM2Q96G03 612 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 C9orf72Q96LT7 481 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 GDAP1L1Q96MZ0 367 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 ZIM3Q96PE6 472 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 LYSMD1Q96S90 227 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 DHRS4Q9BTZ2 278 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 APOL5Q9BWW9 433 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 TDRD1Q9BXT4 1180 aaKnown RBP5.5□□□□□ -1.53
VPS41-211ENST00000466017 TMEM245Q9H330 911 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 TRABDQ9H4I3 376 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 EBF3Q9H4W6 596 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 NOD2Q9HC29 1040 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 MAGEE1Q9HCI5 957 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 MED4Q9NPJ6 270 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 SLC2A4RGQ9NR83 387 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 SIRT5Q9NXA8 310 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 HACD3Q9P035 362 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 THAP10Q9P2Z0 257 aaPredicted RBP5.5□□□□□ -1.53
VPS41-211ENST00000466017 DKK3Q9UBP4 350 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 SLC24A2Q9UI40 661 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 ZNF180Q9UJW8 692 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 PHTF1Q9UMS5 762 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 PLA2G4CQ9UP65 541 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 KCTD3Q9Y597 815 aa5.5□□□□□ -1.53
VPS41-211ENST00000466017 ZCWPW2A0A1B0GU75 182 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 TSPAN11A1L157 253 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 HEATR9A2RTY3 570 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 MROH6A6NGR9 719 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 OTOL1A6NHN0 477 aaPredicted RBP5.49□□□□□ -1.53
VPS41-211ENST00000466017 FAM159BA6NKW6 160 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 KRTAP9-7A8MTY7 169 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 LOC730098B7Z3J9 87 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 GOLGA8MH3BSY2 632 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 H7C0S8 307 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 SLC7A4O43246 635 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 SMAD6O43541 496 aaKnown RBP5.49□□□□□ -1.53
VPS41-211ENST00000466017 SEMA7AO75326 666 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 SYF2O95926 243 aaKnown RBP5.49□□□□□ -1.53
VPS41-211ENST00000466017 AGTP01019 485 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 NTRK1P04629 796 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 APODP05090 189 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 POLBP06746 335 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 IVLP07476 585 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 ENDOUP21128 410 aaKnown RBP5.49□□□□□ -1.53
VPS41-211ENST00000466017 DRD1P21728 446 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 FPR2P25090 351 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 NFKBIAP25963 317 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 MGAT1P26572 445 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 SSTR1P30872 391 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 GDI1P31150 447 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 STX2P32856 288 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 CD86P42081 329 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 TNNT3P45378 269 aaPredicted RBP5.49□□□□□ -1.53
VPS41-211ENST00000466017 RGRP47804 291 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 LIMS1P48059 325 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 SLC6A11P48066 632 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 POLD2P49005 469 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 SCNN1BP51168 640 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 MAXP61244 160 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 ST8SIA6P61647 398 aa5.49□□□□□ -1.53
VPS41-211ENST00000466017 POLR2LP62875 67 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms