RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 PLEKHG4BQ96PX9 1271 aa25.56■■□□□ 1.68
U2AF1-206ENST00000464750 PCDHA3Q9Y5H8 950 aa25.56■■□□□ 1.68
U2AF1-206ENST00000464750 DUSP10Q9Y6W6 482 aa25.56■■□□□ 1.68
U2AF1-206ENST00000464750 FASNP49327 2511 aaKnown RBP25.55■■□□□ 1.68
U2AF1-206ENST00000464750 MACROD2A1Z1Q3 448 aa25.55■■□□□ 1.68
U2AF1-206ENST00000464750 GPR89AB7ZAQ6 455 aa25.55■■□□□ 1.68
U2AF1-206ENST00000464750 HGSO14964 777 aaPredicted RBP25.55■■□□□ 1.68
U2AF1-206ENST00000464750 GPR89BP0CG08 455 aa25.55■■□□□ 1.68
U2AF1-206ENST00000464750 SLC2A4P14672 509 aa25.55■■□□□ 1.68
U2AF1-206ENST00000464750 XRCC4Q13426 336 aa25.55■■□□□ 1.68
U2AF1-206ENST00000464750 SQSTM1Q13501 440 aa25.55■■□□□ 1.68
U2AF1-206ENST00000464750 PLA2G4EQ3MJ16 856 aa25.55■■□□□ 1.68
U2AF1-206ENST00000464750 IYDQ6PHW0 289 aa25.55■■□□□ 1.68
U2AF1-206ENST00000464750 AHCYL2Q96HN2 611 aaKnown RBP25.55■■□□□ 1.68
U2AF1-206ENST00000464750 DPYSL5Q9BPU6 564 aa25.55■■□□□ 1.68
U2AF1-206ENST00000464750 TRABDQ9H4I3 376 aa25.55■■□□□ 1.68
U2AF1-206ENST00000464750 C10orf88Q9H8K7 445 aa25.55■■□□□ 1.68
U2AF1-206ENST00000464750 SARS2Q9NP81 518 aaKnown RBP25.55■■□□□ 1.68
U2AF1-206ENST00000464750 FOXJ2Q9P0K8 574 aa25.55■■□□□ 1.68
U2AF1-206ENST00000464750 TMEM9Q9P0T7 183 aa25.55■■□□□ 1.68
U2AF1-206ENST00000464750 TRHDEQ9UKU6 1024 aa25.55■■□□□ 1.68
U2AF1-206ENST00000464750 BTNL10A8MVZ5 291 aa25.54■■□□□ 1.68
U2AF1-206ENST00000464750 PJA2O43164 708 aa25.54■■□□□ 1.68
U2AF1-206ENST00000464750 MTX2O75431 263 aa25.54■■□□□ 1.68
U2AF1-206ENST00000464750 EPOP01588 193 aa25.54■■□□□ 1.68
U2AF1-206ENST00000464750 THRAP10827 490 aa25.54■■□□□ 1.68
U2AF1-206ENST00000464750 F3P13726 295 aa25.54■■□□□ 1.68
U2AF1-206ENST00000464750 CTNNA2P26232 953 aa25.54■■□□□ 1.68
U2AF1-206ENST00000464750 RBL1P28749 1068 aa25.54■■□□□ 1.68
U2AF1-206ENST00000464750 HMGCLP35914 325 aa25.54■■□□□ 1.68
U2AF1-206ENST00000464750 CFHR1Q03591 330 aa25.54■■□□□ 1.68
U2AF1-206ENST00000464750 MPP3Q13368 585 aa25.54■■□□□ 1.68
U2AF1-206ENST00000464750 NFATC2Q13469 925 aa25.54■■□□□ 1.68
U2AF1-206ENST00000464750 TRA2AQ13595 282 aaKnown RBP eCLIP25.54■■□□□ 1.68
U2AF1-206ENST00000464750 TTC30BQ8N4P2 665 aa25.54■■□□□ 1.68
U2AF1-206ENST00000464750 OR10G6Q8NH81 332 aa25.54■■□□□ 1.68
U2AF1-206ENST00000464750 SLC39A7Q92504 469 aa25.54■■□□□ 1.68
U2AF1-206ENST00000464750 VPS35Q96QK1 796 aa25.54■■□□□ 1.68
U2AF1-206ENST00000464750 LACRTQ9GZZ8 138 aa25.54■■□□□ 1.68
U2AF1-206ENST00000464750 OSGEPL1Q9H4B0 414 aa25.54■■□□□ 1.68
U2AF1-206ENST00000464750 KLC4Q9NSK0 619 aa25.54■■□□□ 1.68
U2AF1-206ENST00000464750 CCDC66A2RUB6 948 aa25.53■■□□□ 1.68
U2AF1-206ENST00000464750 C9orf172C9J069 976 aa25.53■■□□□ 1.68
U2AF1-206ENST00000464750 CHUKO15111 745 aa25.53■■□□□ 1.68
U2AF1-206ENST00000464750 DUX1O43812 170 aa25.53■■□□□ 1.68
U2AF1-206ENST00000464750 LIPCP11150 499 aa25.53■■□□□ 1.68
U2AF1-206ENST00000464750 CCL4P13236 92 aa25.53■■□□□ 1.68
U2AF1-206ENST00000464750 HLA-DPA1P20036 260 aa25.53■■□□□ 1.68
U2AF1-206ENST00000464750 MPSTP25325 297 aa25.53■■□□□ 1.68
U2AF1-206ENST00000464750 CLCNKAP51800 687 aa25.53■■□□□ 1.68
U2AF1-206ENST00000464750 VAV2P52735 878 aa25.53■■□□□ 1.68
U2AF1-206ENST00000464750 OTUD4Q01804 1114 aaKnown RBP25.53■■□□□ 1.68
U2AF1-206ENST00000464750 TGIF1Q15583 401 aa25.53■■□□□ 1.68
U2AF1-206ENST00000464750 SLC1A5Q15758 541 aa25.53■■□□□ 1.68
U2AF1-206ENST00000464750 INSCQ1MX18 579 aa25.53■■□□□ 1.68
U2AF1-206ENST00000464750 KHDC1Q4VXA5 237 aaKnown RBP25.53■■□□□ 1.68
U2AF1-206ENST00000464750 CCDC81Q6ZN84 652 aa25.53■■□□□ 1.68
U2AF1-206ENST00000464750 GLT6D1Q7Z4J2 308 aa25.53■■□□□ 1.68
U2AF1-206ENST00000464750 SLC9B2Q86UD5 537 aa25.53■■□□□ 1.68
U2AF1-206ENST00000464750 LRRTM4Q86VH4 590 aa25.53■■□□□ 1.68
U2AF1-206ENST00000464750 GAS2L3Q86XJ1 694 aa25.53■■□□□ 1.68
U2AF1-206ENST00000464750 ACTL9Q8TC94 416 aa25.53■■□□□ 1.68
U2AF1-206ENST00000464750 BLOC1S5Q8TDH9 187 aa25.53■■□□□ 1.68
U2AF1-206ENST00000464750 FSD1LQ9BXM9 530 aa25.53■■□□□ 1.68
U2AF1-206ENST00000464750 OSBPL8Q9BZF1 889 aa25.53■■□□□ 1.68
U2AF1-206ENST00000464750 GBA3Q9H227 469 aa25.53■■□□□ 1.68
U2AF1-206ENST00000464750 PRDM8Q9NQV8 689 aa25.53■■□□□ 1.68
U2AF1-206ENST00000464750 HACD3Q9P035 362 aa25.53■■□□□ 1.68
U2AF1-206ENST00000464750 EFR3BQ9Y2G0 817 aa25.53■■□□□ 1.68
U2AF1-206ENST00000464750 ZNF106Q9H2Y7 1883 aaKnown RBP25.53■■□□□ 1.68
U2AF1-206ENST00000464750 KIR2DS5A0A0G2JLQ3 304 aa25.52■■□□□ 1.68
U2AF1-206ENST00000464750 A0A0G2JNG1 304 aa25.52■■□□□ 1.68
U2AF1-206ENST00000464750 K7ENP7 123 aa25.52■■□□□ 1.68
U2AF1-206ENST00000464750 KIR2DS3K7RE56 304 aa25.52■■□□□ 1.68
U2AF1-206ENST00000464750 VEGFDO43915 354 aa25.52■■□□□ 1.68
U2AF1-206ENST00000464750 PTPN7P35236 360 aa25.52■■□□□ 1.68
U2AF1-206ENST00000464750 RWDD2BP57060 319 aa25.52■■□□□ 1.68
U2AF1-206ENST00000464750 RHDQ02161 417 aa25.52■■□□□ 1.68
U2AF1-206ENST00000464750 KIR2DS5Q14953 304 aa25.52■■□□□ 1.68
U2AF1-206ENST00000464750 ATP13A5Q4VNC0 1218 aa25.52■■□□□ 1.68
U2AF1-206ENST00000464750 TMEM71Q6P5X7 295 aa25.52■■□□□ 1.68
U2AF1-206ENST00000464750 INO80CQ6PI98 192 aaPredicted RBP25.52■■□□□ 1.68
U2AF1-206ENST00000464750 CDKL3Q8IVW4 592 aaPredicted RBP25.52■■□□□ 1.68
U2AF1-206ENST00000464750 SNRNP27Q8WVK2 155 aaKnown RBP25.52■■□□□ 1.68
U2AF1-206ENST00000464750 SH3KBP1Q96B97 665 aa25.52■■□□□ 1.68
U2AF1-206ENST00000464750 CCNL2Q96S94 520 aaPredicted RBP25.52■■□□□ 1.68
U2AF1-206ENST00000464750 TMPRSS11EQ9UL52 423 aa25.52■■□□□ 1.68
U2AF1-206ENST00000464750 SDK2Q58EX2 2172 aa25.52■■□□□ 1.68
U2AF1-206ENST00000464750 OR5K4A6NMS3 321 aa25.51■■□□□ 1.67
U2AF1-206ENST00000464750 ERVH48-1M5A8F1 160 aa25.51■■□□□ 1.67
U2AF1-206ENST00000464750 KMOO15229 486 aa25.51■■□□□ 1.67
U2AF1-206ENST00000464750 PRB1P04280 392 aa25.51■■□□□ 1.67
U2AF1-206ENST00000464750 SPAM1P38567 509 aa25.51■■□□□ 1.67
U2AF1-206ENST00000464750 TMEM164Q5U3C3 297 aa25.51■■□□□ 1.67
U2AF1-206ENST00000464750 ITPRIPL1Q6GPH6 555 aa25.51■■□□□ 1.67
U2AF1-206ENST00000464750 KIAA1328Q86T90 577 aa25.51■■□□□ 1.67
U2AF1-206ENST00000464750 ZFAND4Q86XD8 727 aa25.51■■□□□ 1.67
U2AF1-206ENST00000464750 LSM14AQ8ND56 463 aaKnown RBP25.51■■□□□ 1.67
U2AF1-206ENST00000464750 BAG1Q99933 345 aaPredicted RBP25.51■■□□□ 1.67
U2AF1-206ENST00000464750 FERMT1Q9BQL6 677 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms