RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 KDELC1Q6UW63 502 aa18.62■□□□□ 0.57
SF3A1-205ENST00000463818 ZC3H18Q86VM9 953 aaKnown RBP18.62■□□□□ 0.57
SF3A1-205ENST00000463818 PHYKPLQ8IUZ5 450 aa18.62■□□□□ 0.57
SF3A1-205ENST00000463818 NCSTNQ92542 709 aa18.62■□□□□ 0.57
SF3A1-205ENST00000463818 P3H4Q92791 437 aa18.62■□□□□ 0.57
SF3A1-205ENST00000463818 ART4Q93070 314 aa18.62■□□□□ 0.57
SF3A1-205ENST00000463818 PMEPA1Q969W9 287 aa18.62■□□□□ 0.57
SF3A1-205ENST00000463818 SGF29Q96ES7 293 aa18.62■□□□□ 0.57
SF3A1-205ENST00000463818 ZMYND15Q9H091 742 aa18.62■□□□□ 0.57
SF3A1-205ENST00000463818 SLC39A1Q9NY26 324 aa18.62■□□□□ 0.57
SF3A1-205ENST00000463818 SLC23A2Q9UGH3 650 aa18.62■□□□□ 0.57
SF3A1-205ENST00000463818 TFR2Q9UP52 801 aa18.62■□□□□ 0.57
SF3A1-205ENST00000463818 PCDHGA3Q9Y5H0 932 aa18.62■□□□□ 0.57
SF3A1-205ENST00000463818 hCG_1818297A0A087WSY0 165 aa18.61■□□□□ 0.57
SF3A1-205ENST00000463818 LOC285095A0A1B0GVY8 99 aa18.61■□□□□ 0.57
SF3A1-205ENST00000463818 EFCAB7A8K855 629 aa18.61■□□□□ 0.57
SF3A1-205ENST00000463818 A8MU76 341 aa18.61■□□□□ 0.57
SF3A1-205ENST00000463818 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.61■□□□□ 0.57
SF3A1-205ENST00000463818 CHUKO15111 745 aa18.61■□□□□ 0.57
SF3A1-205ENST00000463818 MTSS1O43312 755 aa18.61■□□□□ 0.57
SF3A1-205ENST00000463818 LCA5LO95447 670 aa18.61■□□□□ 0.57
SF3A1-205ENST00000463818 NFKB1P19838 968 aa18.61■□□□□ 0.57
SF3A1-205ENST00000463818 ARSDP51689 593 aa18.61■□□□□ 0.57
SF3A1-205ENST00000463818 TFDP3Q5H9I0 405 aa18.61■□□□□ 0.57
SF3A1-205ENST00000463818 WDR74Q6RFH5 385 aaPredicted RBP18.61■□□□□ 0.57
SF3A1-205ENST00000463818 PID1Q7Z2X4 250 aa18.61■□□□□ 0.57
SF3A1-205ENST00000463818 CCDC170Q8IYT3 715 aa18.61■□□□□ 0.57
SF3A1-205ENST00000463818 KATNAL2Q8IYT4 538 aa18.61■□□□□ 0.57
SF3A1-205ENST00000463818 CCDC112Q8NEF3 446 aa18.61■□□□□ 0.57
SF3A1-205ENST00000463818 JPH3Q8WXH2 748 aaPredicted RBP18.61■□□□□ 0.57
SF3A1-205ENST00000463818 HAUS1Q96CS2 278 aa18.61■□□□□ 0.57
SF3A1-205ENST00000463818 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.61■□□□□ 0.57
SF3A1-205ENST00000463818 OSGEPL1Q9H4B0 414 aa18.61■□□□□ 0.57
SF3A1-205ENST00000463818 SCHIP1Q9P0W5 487 aaPredicted RBP18.61■□□□□ 0.57
SF3A1-205ENST00000463818 KLHL8Q9P2G9 620 aaPredicted RBP18.61■□□□□ 0.57
SF3A1-205ENST00000463818 CPNE7Q9UBL6 633 aa18.61■□□□□ 0.57
SF3A1-205ENST00000463818 TMPRSS11EQ9UL52 423 aa18.61■□□□□ 0.57
SF3A1-205ENST00000463818 B3GALT1Q9Y5Z6 326 aa18.61■□□□□ 0.57
SF3A1-205ENST00000463818 B4E171 279 aa18.6■□□□□ 0.57
SF3A1-205ENST00000463818 GPR89AB7ZAQ6 455 aa18.6■□□□□ 0.57
SF3A1-205ENST00000463818 F5H423 210 aaPredicted RBP18.6■□□□□ 0.57
SF3A1-205ENST00000463818 STMND1H3BQB6 276 aa18.6■□□□□ 0.57
SF3A1-205ENST00000463818 KMOO15229 486 aa18.6■□□□□ 0.57
SF3A1-205ENST00000463818 MTX2O75431 263 aa18.6■□□□□ 0.57
SF3A1-205ENST00000463818 CDK14O94921 469 aa18.6■□□□□ 0.57
SF3A1-205ENST00000463818 EPOP01588 193 aa18.6■□□□□ 0.57
SF3A1-205ENST00000463818 GPR89BP0CG08 455 aa18.6■□□□□ 0.57
SF3A1-205ENST00000463818 ZNF7P17097 686 aaPredicted RBP18.6■□□□□ 0.57
SF3A1-205ENST00000463818 TSPAN7P41732 249 aa18.6■□□□□ 0.57
SF3A1-205ENST00000463818 MAPK9P45984 424 aa18.6■□□□□ 0.57
SF3A1-205ENST00000463818 MARCKSL1P49006 195 aa18.6■□□□□ 0.57
SF3A1-205ENST00000463818 NOMO1Q15155 1222 aa18.6■□□□□ 0.57
SF3A1-205ENST00000463818 SPA17Q15506 151 aa18.6■□□□□ 0.57
SF3A1-205ENST00000463818 CRTC3Q6UUV7 619 aa18.6■□□□□ 0.57
SF3A1-205ENST00000463818 ARHGAP22Q7Z5H3 698 aa18.6■□□□□ 0.57
SF3A1-205ENST00000463818 FAM129CQ86XR2 697 aa18.6■□□□□ 0.57
SF3A1-205ENST00000463818 CCDC50Q8IVM0 306 aa18.6■□□□□ 0.57
SF3A1-205ENST00000463818 ZNF567Q8N184 647 aa18.6■□□□□ 0.57
SF3A1-205ENST00000463818 SLC25A41Q8N5S1 370 aa18.6■□□□□ 0.57
SF3A1-205ENST00000463818 MED8Q96G25 268 aa18.6■□□□□ 0.57
SF3A1-205ENST00000463818 PLEKHG4BQ96PX9 1271 aa18.6■□□□□ 0.57
SF3A1-205ENST00000463818 FCRL5Q96RD9 977 aa18.6■□□□□ 0.57
SF3A1-205ENST00000463818 TBC1D10AQ9BXI6 508 aa18.6■□□□□ 0.57
SF3A1-205ENST00000463818 HEMGNQ9BXL5 484 aa18.6■□□□□ 0.57
SF3A1-205ENST00000463818 KALRNO60229 2985 aa18.6■□□□□ 0.57
SF3A1-205ENST00000463818 VEGFDO43915 354 aa18.59■□□□□ 0.57
SF3A1-205ENST00000463818 XRCC1P18887 633 aaPredicted RBP18.59■□□□□ 0.57
SF3A1-205ENST00000463818 WT1P19544 449 aaPredicted RBP18.59■□□□□ 0.57
SF3A1-205ENST00000463818 HMGCLP35914 325 aa18.59■□□□□ 0.57
SF3A1-205ENST00000463818 EPHA4P54764 986 aa18.59■□□□□ 0.57
SF3A1-205ENST00000463818 UBE2IP63279 158 aaKnown RBP18.59■□□□□ 0.57
SF3A1-205ENST00000463818 INSCQ1MX18 579 aa18.59■□□□□ 0.57
SF3A1-205ENST00000463818 PLA2G4EQ3MJ16 856 aa18.59■□□□□ 0.57
SF3A1-205ENST00000463818 LINC00303Q3SY05 128 aa18.59■□□□□ 0.57
SF3A1-205ENST00000463818 ATP13A5Q4VNC0 1218 aa18.59■□□□□ 0.57
SF3A1-205ENST00000463818 KHDC1Q4VXA5 237 aaKnown RBP18.59■□□□□ 0.57
SF3A1-205ENST00000463818 SIRPB2Q5JXA9 342 aa18.59■□□□□ 0.57
SF3A1-205ENST00000463818 LRRTM4Q86VH4 590 aa18.59■□□□□ 0.57
SF3A1-205ENST00000463818 TTC30BQ8N4P2 665 aa18.59■□□□□ 0.57
SF3A1-205ENST00000463818 EXD3Q8N9H8 876 aa18.59■□□□□ 0.57
SF3A1-205ENST00000463818 ZSCAN1Q8NBB4 408 aa18.59■□□□□ 0.57
SF3A1-205ENST00000463818 HTR3CQ8WXA8 447 aa18.59■□□□□ 0.57
SF3A1-205ENST00000463818 KRT35Q92764 455 aa18.59■□□□□ 0.57
SF3A1-205ENST00000463818 NKD1Q969G9 470 aa18.59■□□□□ 0.57
SF3A1-205ENST00000463818 OXNAD1Q96HP4 312 aaPredicted RBP18.59■□□□□ 0.57
SF3A1-205ENST00000463818 RBM41Q96IZ5 413 aaKnown RBP18.59■□□□□ 0.57
SF3A1-205ENST00000463818 MRGPRX2Q96LB1 330 aa18.59■□□□□ 0.57
SF3A1-205ENST00000463818 VAT1Q99536 393 aa18.59■□□□□ 0.57
SF3A1-205ENST00000463818 DDA1Q9BW61 102 aa18.59■□□□□ 0.57
SF3A1-205ENST00000463818 ASPSCR1Q9BZE9 553 aa18.59■□□□□ 0.57
SF3A1-205ENST00000463818 TRABDQ9H4I3 376 aa18.59■□□□□ 0.57
SF3A1-205ENST00000463818 DNAJC16Q9Y2G8 782 aa18.59■□□□□ 0.57
SF3A1-205ENST00000463818 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.59■□□□□ 0.57
SF3A1-205ENST00000463818 PCDHGA4Q9Y5G9 962 aa18.59■□□□□ 0.57
SF3A1-205ENST00000463818 HACD1B0YJ81 288 aa18.58■□□□□ 0.56
SF3A1-205ENST00000463818 PLA2G2AP14555 144 aa18.58■□□□□ 0.56
SF3A1-205ENST00000463818 CYLC1P35663 651 aaPredicted RBP18.58■□□□□ 0.56
SF3A1-205ENST00000463818 SLC19A1P41440 591 aa18.58■□□□□ 0.56
SF3A1-205ENST00000463818 CHRNA4P43681 627 aa18.58■□□□□ 0.56
SF3A1-205ENST00000463818 TNNT3P45378 269 aaPredicted RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms