RNA–Protein interactions for RNA: ENST00000463419.1

NIN-208, Transcript of ninein, humanhuman

TSL 4

Gene NIN, Length 1,317 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-208ENST00000463419 HTR3CQ8WXA8 447 aa12.83□□□□□ -0.36
NIN-208ENST00000463419 OXNAD1Q96HP4 312 aaPredicted RBP12.83□□□□□ -0.36
NIN-208ENST00000463419 QKIQ96PU8 341 aaKnown RBP eCLIP12.83□□□□□ -0.36
NIN-208ENST00000463419 FCRL5Q96RD9 977 aa12.83□□□□□ -0.36
NIN-208ENST00000463419 HERPUD2Q9BSE4 406 aa12.83□□□□□ -0.36
NIN-208ENST00000463419 OR2AG1Q9H205 316 aa12.83□□□□□ -0.36
NIN-208ENST00000463419 C10orf88Q9H8K7 445 aa12.83□□□□□ -0.36
NIN-208ENST00000463419 TRIM39Q9HCM9 518 aa12.83□□□□□ -0.36
NIN-208ENST00000463419 BPIFA1Q9NP55 256 aa12.83□□□□□ -0.36
NIN-208ENST00000463419 RAD18Q9NS91 495 aa12.83□□□□□ -0.36
NIN-208ENST00000463419 KCNK4Q9NYG8 393 aa12.83□□□□□ -0.36
NIN-208ENST00000463419 KLHL8Q9P2G9 620 aaPredicted RBP12.83□□□□□ -0.36
NIN-208ENST00000463419 REXO2Q9Y3B8 237 aaKnown RBP12.83□□□□□ -0.36
NIN-208ENST00000463419 ADGRG1Q9Y653 693 aa12.83□□□□□ -0.36
NIN-208ENST00000463419 RP1P56715 2156 aa12.82□□□□□ -0.36
NIN-208ENST00000463419 PRAMEF33A0A0G2JMD5 474 aa12.82□□□□□ -0.36
NIN-208ENST00000463419 A6NCN8 305 aa12.82□□□□□ -0.36
NIN-208ENST00000463419 HACD1B0YJ81 288 aa12.82□□□□□ -0.36
NIN-208ENST00000463419 RNF223E7ERA6 249 aa12.82□□□□□ -0.36
NIN-208ENST00000463419 APOC4-APOC2K7ER74 178 aa12.82□□□□□ -0.36
NIN-208ENST00000463419 ATXN7O15265 892 aaPredicted RBP12.82□□□□□ -0.36
NIN-208ENST00000463419 NVLO15381 856 aaKnown RBP12.82□□□□□ -0.36
NIN-208ENST00000463419 SNX2O60749 519 aa12.82□□□□□ -0.36
NIN-208ENST00000463419 PRAMEF10O60809 474 aa12.82□□□□□ -0.36
NIN-208ENST00000463419 APOC2P02655 101 aa12.82□□□□□ -0.36
NIN-208ENST00000463419 CSF2RBP32927 897 aa12.82□□□□□ -0.36
NIN-208ENST00000463419 CHRNA4P43681 627 aa12.82□□□□□ -0.36
NIN-208ENST00000463419 LIMK2P53671 638 aa12.82□□□□□ -0.36
NIN-208ENST00000463419 MAPK10P53779 464 aa12.82□□□□□ -0.36
NIN-208ENST00000463419 VAC14Q08AM6 782 aa12.82□□□□□ -0.36
NIN-208ENST00000463419 SQSTM1Q13501 440 aa12.82□□□□□ -0.36
NIN-208ENST00000463419 SIRPB2Q5JXA9 342 aa12.82□□□□□ -0.36
NIN-208ENST00000463419 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.82□□□□□ -0.36
NIN-208ENST00000463419 PDPK2PQ6A1A2 396 aa12.82□□□□□ -0.36
NIN-208ENST00000463419 IYDQ6PHW0 289 aa12.82□□□□□ -0.36
NIN-208ENST00000463419 BBS12Q6ZW61 710 aa12.82□□□□□ -0.36
NIN-208ENST00000463419 GAS2L3Q86XJ1 694 aa12.82□□□□□ -0.36
NIN-208ENST00000463419 ZNF761Q86XN6 746 aaPredicted RBP12.82□□□□□ -0.36
NIN-208ENST00000463419 SLC25A41Q8N5S1 370 aa12.82□□□□□ -0.36
NIN-208ENST00000463419 USP7Q93009 1102 aa12.82□□□□□ -0.36
NIN-208ENST00000463419 GLYATL1Q969I3 302 aa12.82□□□□□ -0.36
NIN-208ENST00000463419 MRGPRX2Q96LB1 330 aa12.82□□□□□ -0.36
NIN-208ENST00000463419 CCDC74BQ96LY2 380 aa12.82□□□□□ -0.36
NIN-208ENST00000463419 SRPK1Q96SB4 655 aaKnown RBP12.82□□□□□ -0.36
NIN-208ENST00000463419 VAT1Q99536 393 aa12.82□□□□□ -0.36
NIN-208ENST00000463419 TMEM9Q9P0T7 183 aa12.82□□□□□ -0.36
NIN-208ENST00000463419 ACSL6Q9UKU0 697 aa12.82□□□□□ -0.36
NIN-208ENST00000463419 PCDHA3Q9Y5H8 950 aa12.82□□□□□ -0.36
NIN-208ENST00000463419 KNTC1P50748 2209 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 EIF4E1BA6NMX2 242 aaKnown RBP12.81□□□□□ -0.36
NIN-208ENST00000463419 BTNL10A8MVZ5 291 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 C9orf172C9J069 976 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 CHUKO15111 745 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 MTX2O75431 263 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 EPOP01588 193 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 PRB1P04280 392 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 CCL4P13236 92 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 MPSTP25325 297 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 RBL1P28749 1068 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 HMGCLP35914 325 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 SLC19A1P41440 591 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 NAP1L1P55209 391 aaKnown RBP12.81□□□□□ -0.36
NIN-208ENST00000463419 GPLD1P80108 840 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 HHEXQ03014 270 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 XRCC4Q13426 336 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 TGIF1Q15583 401 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 SLC1A5Q15758 541 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 CRTC3Q6UUV7 619 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 PCSK4Q6UW60 755 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 PHYKPLQ8IUZ5 450 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 TTC30BQ8N4P2 665 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 ACRBPQ8NEB7 543 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 OR4D9Q8NGE8 314 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 SNRNP27Q8WVK2 155 aaKnown RBP12.81□□□□□ -0.36
NIN-208ENST00000463419 CALR3Q96L12 384 aaKnown RBP12.81□□□□□ -0.36
NIN-208ENST00000463419 PLEKHG4BQ96PX9 1271 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 SLC38A3Q99624 504 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 LACRTQ9GZZ8 138 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 SARS2Q9NP81 518 aaKnown RBP12.81□□□□□ -0.36
NIN-208ENST00000463419 PRDM8Q9NQV8 689 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 KLC4Q9NSK0 619 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 FOXJ2Q9P0K8 574 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 AKAP7Q9P0M2 348 aaPredicted RBP12.81□□□□□ -0.36
NIN-208ENST00000463419 SLC23A2Q9UGH3 650 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 RSPH14Q9UHP6 348 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 TMPRSS11EQ9UL52 423 aa12.81□□□□□ -0.36
NIN-208ENST00000463419 GPR89AB7ZAQ6 455 aa12.8□□□□□ -0.36
NIN-208ENST00000463419 H7C0C1 242 aa12.8□□□□□ -0.36
NIN-208ENST00000463419 K7ENP7 123 aa12.8□□□□□ -0.36
NIN-208ENST00000463419 HGSO14964 777 aaPredicted RBP12.8□□□□□ -0.36
NIN-208ENST00000463419 EFSO43281 561 aa12.8□□□□□ -0.36
NIN-208ENST00000463419 IPO7O95373 1038 aaKnown RBP12.8□□□□□ -0.36
NIN-208ENST00000463419 GPR89BP0CG08 455 aa12.8□□□□□ -0.36
NIN-208ENST00000463419 THRAP10827 490 aa12.8□□□□□ -0.36
NIN-208ENST00000463419 F3P13726 295 aa12.8□□□□□ -0.36
NIN-208ENST00000463419 ATP5OP48047 213 aa12.8□□□□□ -0.36
NIN-208ENST00000463419 CLCNKAP51800 687 aa12.8□□□□□ -0.36
NIN-208ENST00000463419 OTUD4Q01804 1114 aaKnown RBP12.8□□□□□ -0.36
NIN-208ENST00000463419 MPP3Q13368 585 aa12.8□□□□□ -0.36
NIN-208ENST00000463419 NFATC2Q13469 925 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms