RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 GUCY2DQ02846 1103 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 UBE3AQ05086 875 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 TWF1Q12792 350 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 EIF4EBP2Q13542 120 aaPredicted RBP7.48□□□□□ -1.21
UBE4B-204ENST00000462658 TFDP2Q14188 446 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 FGL2Q14314 439 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 GALEQ14376 348 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 VEPH1Q14D04 833 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 TAF12Q16514 161 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 ANKRD20A8PQ5CZ79 823 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 PPP6R3Q5H9R7 873 aaPredicted RBP7.48□□□□□ -1.21
UBE4B-204ENST00000462658 MSANTD2Q6P1R3 559 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.48□□□□□ -1.21
UBE4B-204ENST00000462658 CCNI2Q6ZMN8 369 aaPredicted RBP7.48□□□□□ -1.21
UBE4B-204ENST00000462658 IFT20Q8IY31 132 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 PYROXD2Q8N2H3 581 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 MRPL43Q8N983 215 aaKnown RBP7.48□□□□□ -1.21
UBE4B-204ENST00000462658 PDPRQ8NCN5 879 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 BRIX1Q8TDN6 353 aaKnown RBP7.48□□□□□ -1.21
UBE4B-204ENST00000462658 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.48□□□□□ -1.21
UBE4B-204ENST00000462658 ATG4AQ8WYN0 398 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 OVCA2Q8WZ82 227 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 RUBCNQ92622 972 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 CASP10Q92851 521 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 NTAN1Q96AB6 310 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 HAUS1Q96CS2 278 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 FAF2Q96CS3 445 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 MTFMTQ96DP5 389 aaKnown RBP7.48□□□□□ -1.21
UBE4B-204ENST00000462658 SERPINB11Q96P15 392 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 KLHL5Q96PQ7 755 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 VKORC1Q9BQB6 163 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 ZNF670Q9BS34 389 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 TKTL2Q9H0I9 626 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 SMOC2Q9H3U7 446 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 EPB41L5Q9HCM4 733 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 ENTPD7Q9NQZ7 604 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 OLA1Q9NTK5 396 aaKnown RBP7.48□□□□□ -1.21
UBE4B-204ENST00000462658 MRPS18AQ9NVS2 196 aaKnown RBP7.48□□□□□ -1.21
UBE4B-204ENST00000462658 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.48□□□□□ -1.21
UBE4B-204ENST00000462658 ARGLU1Q9NWB6 273 aaPredicted RBP7.48□□□□□ -1.21
UBE4B-204ENST00000462658 MTMR10Q9NXD2 777 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 CLIC5Q9NZA1 410 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 PCYOX1Q9UHG3 505 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 PTPRDP23468 1912 aa7.48□□□□□ -1.21
UBE4B-204ENST00000462658 NPIPB8E9PQR5 432 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 APOC4-APOC2K7ER74 178 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 APOL1O14791 398 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 LIASO43766 372 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 CREB3O43889 395 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 LPXNO60711 386 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 ERLIN1O75477 346 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 CSPG5O95196 566 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 GPANK1O95872 356 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 TBX18O95935 607 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 APOC2P02655 101 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 CA3P07451 260 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 ZDHHC11BP0C7U3 371 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 H2AFXP16104 143 aaPredicted RBP7.47□□□□□ -1.21
UBE4B-204ENST00000462658 ZFXP17010 805 aaPredicted RBP7.47□□□□□ -1.21
UBE4B-204ENST00000462658 HMGA1P17096 107 aaKnown RBP7.47□□□□□ -1.21
UBE4B-204ENST00000462658 DNAJB1P25685 340 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 CCR1P32246 355 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 AGFG1P52594 562 aaKnown RBP7.47□□□□□ -1.21
UBE4B-204ENST00000462658 VSNL1P62760 191 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 OTUD4Q01804 1114 aaKnown RBP7.47□□□□□ -1.21
UBE4B-204ENST00000462658 SCAPQ12770 1279 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 BYSLQ13895 437 aaKnown RBP7.47□□□□□ -1.21
UBE4B-204ENST00000462658 GBX1Q14549 363 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 BRD3Q15059 726 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 CRB2Q5IJ48 1285 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 KHDC1LQ5JSQ8 128 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 BRMS1LQ5PSV4 323 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 C10orf120Q5SQS8 335 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 PLPP4Q5VZY2 271 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 B3GNTL1Q67FW5 361 aaPredicted RBP7.47□□□□□ -1.21
UBE4B-204ENST00000462658 DNAJB7Q7Z6W7 309 aaPredicted RBP7.47□□□□□ -1.21
UBE4B-204ENST00000462658 PQLC3Q8N755 202 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 CPEB3Q8NE35 698 aaKnown RBP7.47□□□□□ -1.21
UBE4B-204ENST00000462658 GRK7Q8WTQ7 553 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 CSPG4P5Q96PW8 444 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 TGS1Q96RS0 853 aaKnown RBP7.47□□□□□ -1.21
UBE4B-204ENST00000462658 FAM118BQ9BPY3 351 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 FRMD8P1Q9BZ68 369 aaPredicted RBP7.47□□□□□ -1.21
UBE4B-204ENST00000462658 RAB17Q9H0T7 212 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 ZMAT3Q9HA38 289 aaKnown RBP7.47□□□□□ -1.21
UBE4B-204ENST00000462658 PRDM16Q9HAZ2 1276 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 GDF3Q9NR23 364 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 ARHGEF38Q9NXL2 777 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 CWC15Q9P013 229 aaKnown RBP7.47□□□□□ -1.21
UBE4B-204ENST00000462658 CFAP97Q9P2B7 532 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 RCOR3Q9P2K3 495 aaPredicted RBP7.47□□□□□ -1.21
UBE4B-204ENST00000462658 RASAL2Q9UJF2 1139 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 DNPEPQ9ULA0 475 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 ZNF148Q9UQR1 794 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 DRG1Q9Y295 367 aaKnown RBP7.47□□□□□ -1.21
UBE4B-204ENST00000462658 UTP11Q9Y3A2 253 aaKnown RBP7.47□□□□□ -1.21
UBE4B-204ENST00000462658 INSL5Q9Y5Q6 135 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 XIRP2A4UGR9 3374 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 A0A0C4DFX4 3053 aa7.47□□□□□ -1.21
UBE4B-204ENST00000462658 CCDC151A5D8V7 595 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms