RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 TDRD1Q9BXT4 1180 aaKnown RBP7.87□□□□□ -1.15
CDC42BPA-210ENST00000462553 MAK16Q9BXY0 300 aaKnown RBP7.87□□□□□ -1.15
CDC42BPA-210ENST00000462553 GSDMCQ9BYG8 508 aa7.87□□□□□ -1.15
CDC42BPA-210ENST00000462553 ADNPQ9H2P0 1102 aa7.87□□□□□ -1.15
CDC42BPA-210ENST00000462553 SUDS3Q9H7L9 328 aaPredicted RBP7.87□□□□□ -1.15
CDC42BPA-210ENST00000462553 PHPT1Q9NRX4 125 aaPredicted RBP7.87□□□□□ -1.15
CDC42BPA-210ENST00000462553 TRNAU1APQ9NX07 287 aaKnown RBP7.87□□□□□ -1.15
CDC42BPA-210ENST00000462553 MOSPD1Q9UJG1 213 aa7.87□□□□□ -1.15
CDC42BPA-210ENST00000462553 PACSIN2Q9UNF0 486 aaPredicted RBP7.87□□□□□ -1.15
CDC42BPA-210ENST00000462553 SLC17A4Q9Y2C5 497 aa7.87□□□□□ -1.15
CDC42BPA-210ENST00000462553 PLEKHM1Q9Y4G2 1056 aa7.87□□□□□ -1.15
CDC42BPA-210ENST00000462553 PCYT1BQ9Y5K3 369 aaPredicted RBP7.87□□□□□ -1.15
CDC42BPA-210ENST00000462553 B3GALT1Q9Y5Z6 326 aa7.87□□□□□ -1.15
CDC42BPA-210ENST00000462553 A0A0J9YYE9 177 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 A0A1W2PQ67 120 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 CCDC66A2RUB6 948 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 RHPN2P1A8MT19 583 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 GOLGA6L6A8MZA4 724 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 APOC4-APOC2K7ER74 178 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 EML2O95834 649 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 FTCDO95954 541 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 TRBC1P01850 177 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 APOC2P02655 101 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 IVLP07476 585 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 PYGMP11217 842 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 SPTBP11277 2137 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 CTPS1P17812 591 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 MPSTP25325 297 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 CD68P34810 354 aaPredicted RBP7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 CD86P42081 329 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 NR2C2P49116 596 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 POLR2LP62875 67 aaKnown RBP7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 AP1B1Q10567 949 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 ILF3Q12906 894 aaKnown RBP eCLIP7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 KCNAB2Q13303 367 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 SQSTM1Q13501 440 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 TRA2AQ13595 282 aaKnown RBP eCLIP7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 TFDP2Q14188 446 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 NOMO1Q15155 1222 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 SKIDA1Q1XH10 827 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 ARMC12Q5T9G4 340 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 TMEM164Q5U3C3 297 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 RFLNAQ6ZTI6 216 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 Q6ZVL8 140 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 TECPR1Q7Z6L1 1165 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 PTRH1Q86Y79 214 aaKnown RBP7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 CCDC50Q8IVM0 306 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 LRRC8AQ8IWT6 810 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 RCOR2Q8IZ40 523 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 CCDC112Q8NEF3 446 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 PDCD6IPQ8WUM4 868 aaKnown RBP7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 ART4Q93070 314 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 SCRN2Q96FV2 425 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 IMP4Q96G21 291 aaKnown RBP7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 HES6Q96HZ4 224 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 TRIB3Q96RU7 358 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 HEMGNQ9BXL5 484 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 OSBPL8Q9BZF1 889 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 SPRY4Q9C004 299 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 BRD8Q9H0E9 1235 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 CDH19Q9H159 772 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 GRPEL1Q9HAV7 217 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 OCIAD1Q9NX40 245 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 PDP2Q9P2J9 529 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 PHTF1Q9UMS5 762 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 CHKBQ9Y259 395 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 TTLL3Q9Y4R7 772 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 PCDHB11Q9Y5F2 797 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 DOPEY1Q5JWR5 2465 aa7.86□□□□□ -1.15
CDC42BPA-210ENST00000462553 B4E171 279 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 PSMD11O00231 422 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 PDE2AO00408 941 aaPredicted RBP7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 DUX1O43812 170 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 RAD1O60671 282 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 TSPAN7P41732 249 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 FASLGP48023 281 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 ATP1A2P50993 1020 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 NAP1L1P55209 391 aaKnown RBP7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 RWDD2BP57060 319 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 COPS2P61201 443 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 OTUD4Q01804 1114 aaKnown RBP7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 DPTQ07507 201 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 ITKQ08881 620 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 KIF5AQ12840 1032 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 KLF1Q13351 362 aaPredicted RBP7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 LAPTM4AQ15012 233 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 QPCTQ16769 361 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 TEX44Q53QW1 395 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 ODF2Q5BJF6 829 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 DENND2CQ68D51 928 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 ANKS6Q68DC2 871 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 RAET1GQ6H3X3 334 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 DOK6Q6PKX4 331 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 KDELC1Q6UW63 502 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 ZNF662Q6ZS27 426 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 USP45Q70EL2 814 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 TRIM74Q86UV6 250 aa7.85□□□□□ -1.15
CDC42BPA-210ENST00000462553 ZNF761Q86XN6 746 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms