RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 BLACEA4D250 179 aa13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 C5orf60A6NFR6 353 aa13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 ENO4A6NNW6 628 aa13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 ZNF189O75820 626 aaPredicted RBP13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 CPNE6O95741 557 aa13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 NFKBIAP25963 317 aa13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 ADRA1AP35348 466 aa13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 ETV3P41162 512 aa13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 KIAA1024LP59773 190 aa13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 EIF3EP60228 445 aaKnown RBP13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 B4GALNT1Q00973 533 aa13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 CDK18Q07002 472 aa13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 TRA2AQ13595 282 aaKnown RBP eCLIP13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 PNCKQ6P2M8 343 aa13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 NYAP1Q6ZVC0 841 aa13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 Q6ZVL8 140 aa13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 C17orf82Q86X59 251 aaPredicted RBP13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 SLC13A5Q86YT5 568 aaPredicted RBP13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 CDKL3Q8IVW4 592 aaPredicted RBP13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 TTC13Q8NBP0 860 aa13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 TSACCQ96A04 125 aaPredicted RBP13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 SLC45A3Q96JT2 553 aa13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 WDR92Q96MX6 357 aa13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 SPATA13Q96N96 652 aa13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 FAM118BQ9BPY3 351 aa13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 APOOQ9BUR5 198 aa13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 SEMA6CQ9H3T2 930 aa13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 MAGEE1Q9HCI5 957 aa13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 LRIT1Q9P2V4 623 aa13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 KLQ9UEF7 1012 aa13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 FAM153AQ9UHL3 310 aa13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 DNPEPQ9ULA0 475 aa13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 NBPF19A0A087WUL8 3843 aa13.55□□□□□ -0.24
SCAMP4-206ENST00000460767 RGSL1A5PLK6 1076 aa13.54□□□□□ -0.24
SCAMP4-206ENST00000460767 A8MX80 341 aa13.54□□□□□ -0.24
SCAMP4-206ENST00000460767 NDST3O95803 873 aa13.54□□□□□ -0.24
SCAMP4-206ENST00000460767 TNFP01375 233 aa13.54□□□□□ -0.24
SCAMP4-206ENST00000460767 LIFP15018 202 aa13.54□□□□□ -0.24
SCAMP4-206ENST00000460767 UGT1A3P35503 534 aa13.54□□□□□ -0.24
SCAMP4-206ENST00000460767 CETN2P41208 172 aa13.54□□□□□ -0.24
SCAMP4-206ENST00000460767 WNT3AP56704 352 aa13.54□□□□□ -0.24
SCAMP4-206ENST00000460767 RPS6KA1Q15418 735 aa13.54□□□□□ -0.24
SCAMP4-206ENST00000460767 MAP9Q49MG5 647 aa13.54□□□□□ -0.24
SCAMP4-206ENST00000460767 CRTC2Q53ET0 693 aaPredicted RBP13.54□□□□□ -0.24
SCAMP4-206ENST00000460767 ANKRD20A2Q5SQ80 823 aa13.54□□□□□ -0.24
SCAMP4-206ENST00000460767 PHF19Q5T6S3 580 aa13.54□□□□□ -0.24
SCAMP4-206ENST00000460767 HENMT1Q5T8I9 393 aaKnown RBP13.54□□□□□ -0.24
SCAMP4-206ENST00000460767 ANKRD20A1Q5TYW2 823 aa13.54□□□□□ -0.24
SCAMP4-206ENST00000460767 ANKRD20A3Q5VUR7 823 aa13.54□□□□□ -0.24
SCAMP4-206ENST00000460767 KCTD11Q693B1 232 aa13.54□□□□□ -0.24
SCAMP4-206ENST00000460767 ENPP7Q6UWV6 458 aa13.54□□□□□ -0.24
SCAMP4-206ENST00000460767 RANBP10Q6VN20 620 aa13.54□□□□□ -0.24
SCAMP4-206ENST00000460767 NRSN1Q8IZ57 195 aa13.54□□□□□ -0.24
SCAMP4-206ENST00000460767 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.54□□□□□ -0.24
SCAMP4-206ENST00000460767 LPCAT1Q8NF37 534 aa13.54□□□□□ -0.24
SCAMP4-206ENST00000460767 NUS1Q96E22 293 aa13.54□□□□□ -0.24
SCAMP4-206ENST00000460767 PDXPQ96GD0 296 aa13.54□□□□□ -0.24
SCAMP4-206ENST00000460767 SCARF2Q96GP6 870 aaPredicted RBP13.54□□□□□ -0.24
SCAMP4-206ENST00000460767 COX14Q96I36 57 aa13.54□□□□□ -0.24
SCAMP4-206ENST00000460767 MLPHQ9BV36 600 aaPredicted RBP13.54□□□□□ -0.24
SCAMP4-206ENST00000460767 LGR4Q9BXB1 951 aa13.54□□□□□ -0.24
SCAMP4-206ENST00000460767 ADGRE3Q9BY15 652 aa13.54□□□□□ -0.24
SCAMP4-206ENST00000460767 ABCG8Q9H221 673 aa13.54□□□□□ -0.24
SCAMP4-206ENST00000460767 ARHGEF17Q96PE2 2063 aaPredicted RBP13.53□□□□□ -0.24
SCAMP4-206ENST00000460767 TMEM202A6NGA9 273 aa13.53□□□□□ -0.24
SCAMP4-206ENST00000460767 TNFRSF10CO14798 259 aa13.53□□□□□ -0.24
SCAMP4-206ENST00000460767 CLDN7O95471 211 aa13.53□□□□□ -0.24
SCAMP4-206ENST00000460767 FUCA1P04066 466 aa13.53□□□□□ -0.24
SCAMP4-206ENST00000460767 CCL4P13236 92 aa13.53□□□□□ -0.24
SCAMP4-206ENST00000460767 SPINT3P49223 89 aa13.53□□□□□ -0.24
SCAMP4-206ENST00000460767 GDF10P55107 478 aa13.53□□□□□ -0.24
SCAMP4-206ENST00000460767 DCDC1P59894 354 aa13.53□□□□□ -0.24
SCAMP4-206ENST00000460767 MPP3Q13368 585 aa13.53□□□□□ -0.24
SCAMP4-206ENST00000460767 SQSTM1Q13501 440 aa13.53□□□□□ -0.24
SCAMP4-206ENST00000460767 GALNT3Q14435 633 aa13.53□□□□□ -0.24
SCAMP4-206ENST00000460767 ACOX1Q15067 660 aa13.53□□□□□ -0.24
SCAMP4-206ENST00000460767 DRICH1Q6PGQ1 229 aaPredicted RBP13.53□□□□□ -0.24
SCAMP4-206ENST00000460767 ADAMTSL4Q6UY14 1074 aa13.53□□□□□ -0.24
SCAMP4-206ENST00000460767 TMC3Q7Z5M5 1100 aa13.53□□□□□ -0.24
SCAMP4-206ENST00000460767 PIM3Q86V86 326 aa13.53□□□□□ -0.24
SCAMP4-206ENST00000460767 NDUFAF2Q8N183 169 aa13.53□□□□□ -0.24
SCAMP4-206ENST00000460767 Q8N9G6 341 aaPredicted RBP13.53□□□□□ -0.24
SCAMP4-206ENST00000460767 DTX3LQ8TDB6 740 aa13.53□□□□□ -0.24
SCAMP4-206ENST00000460767 ALS2CR12Q96Q35 445 aa13.53□□□□□ -0.24
SCAMP4-206ENST00000460767 FRMD8Q9BZ67 464 aaPredicted RBP13.53□□□□□ -0.24
SCAMP4-206ENST00000460767 FRMD8P1Q9BZ68 369 aaPredicted RBP13.53□□□□□ -0.24
SCAMP4-206ENST00000460767 LRRC4CQ9HCJ2 640 aa13.53□□□□□ -0.24
SCAMP4-206ENST00000460767 KLHL8Q9P2G9 620 aaPredicted RBP13.53□□□□□ -0.24
SCAMP4-206ENST00000460767 CNOT6Q9ULM6 557 aaKnown RBP13.53□□□□□ -0.24
SCAMP4-206ENST00000460767 OR1A2Q9Y585 309 aa13.53□□□□□ -0.24
SCAMP4-206ENST00000460767 SPO11Q9Y5K1 396 aa13.53□□□□□ -0.24
SCAMP4-206ENST00000460767 MYO9AB2RTY4 2548 aa13.53□□□□□ -0.24
SCAMP4-206ENST00000460767 GOLGA6L9A6NEM1 432 aa13.52□□□□□ -0.25
SCAMP4-206ENST00000460767 H7C0C1 242 aa13.52□□□□□ -0.25
SCAMP4-206ENST00000460767 KCNN4O15554 427 aa13.52□□□□□ -0.25
SCAMP4-206ENST00000460767 ZW10O43264 779 aa13.52□□□□□ -0.25
SCAMP4-206ENST00000460767 LIASO43766 372 aa13.52□□□□□ -0.25
SCAMP4-206ENST00000460767 NRDCO43847 1150 aa13.52□□□□□ -0.25
SCAMP4-206ENST00000460767 PMPCBO75439 489 aa13.52□□□□□ -0.25
SCAMP4-206ENST00000460767 PCCBP05166 539 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms