RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 PELI3Q8N2H9 469 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 FRMD1Q8N878 549 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 GPR26Q8NDV2 337 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 OR2T3Q8NH03 318 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 GANCQ8TET4 914 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 HMGB4Q8WW32 186 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 KLK6Q92876 244 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 MRGPRX1Q96LB2 322 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 MCCC1Q96RQ3 725 aaPredicted RBP10.27□□□□□ -0.77
USP39-210ENST00000459775 RANBP9Q96S59 729 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 OSBPL1AQ9BXW6 950 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 AASDHPPTQ9NRN7 309 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 IL17CQ9P0M4 197 aa10.27□□□□□ -0.77
USP39-210ENST00000459775 TSPAN11A1L157 253 aa10.26□□□□□ -0.77
USP39-210ENST00000459775 FAM47DPA6NHR8 397 aa10.26□□□□□ -0.77
USP39-210ENST00000459775 MAN2B1O00754 1011 aa10.26□□□□□ -0.77
USP39-210ENST00000459775 GAPDHSO14556 408 aaPredicted RBP10.26□□□□□ -0.77
USP39-210ENST00000459775 RASGRF2O14827 1237 aa10.26□□□□□ -0.77
USP39-210ENST00000459775 PI15O43692 258 aa10.26□□□□□ -0.77
USP39-210ENST00000459775 MMP20O60882 483 aa10.26□□□□□ -0.77
USP39-210ENST00000459775 CRTAMO95727 393 aa10.26□□□□□ -0.77
USP39-210ENST00000459775 LMNAP02545 664 aaKnown RBP10.26□□□□□ -0.77
USP39-210ENST00000459775 ABHD2P08910 425 aa10.26□□□□□ -0.77
USP39-210ENST00000459775 CREB1P16220 341 aa10.26□□□□□ -0.77
USP39-210ENST00000459775 BPIP17213 487 aa10.26□□□□□ -0.77
USP39-210ENST00000459775 GM2AP17900 193 aa10.26□□□□□ -0.77
USP39-210ENST00000459775 NDUFV2P19404 249 aa10.26□□□□□ -0.77
USP39-210ENST00000459775 ATP5DP30049 168 aa10.26□□□□□ -0.77
USP39-210ENST00000459775 HMGCLP35914 325 aa10.26□□□□□ -0.77
USP39-210ENST00000459775 SERPINB4P48594 390 aa10.26□□□□□ -0.77
USP39-210ENST00000459775 PSMD7P51665 324 aa10.26□□□□□ -0.77
USP39-210ENST00000459775 RPL26P61254 145 aaKnown RBP10.26□□□□□ -0.77
USP39-210ENST00000459775 MRPS21P82921 87 aaKnown RBP10.26□□□□□ -0.77
USP39-210ENST00000459775 PEX6Q13608 980 aa10.26□□□□□ -0.77
USP39-210ENST00000459775 GRM3Q14832 879 aa10.26□□□□□ -0.77
USP39-210ENST00000459775 STARD3Q14849 445 aa10.26□□□□□ -0.77
USP39-210ENST00000459775 CRY1Q16526 586 aa10.26□□□□□ -0.77
USP39-210ENST00000459775 TEDDM1Q5T9Z0 273 aa10.26□□□□□ -0.77
USP39-210ENST00000459775 NXNQ6DKJ4 435 aa10.26□□□□□ -0.77
USP39-210ENST00000459775 ZNF470Q6ECI4 717 aa10.26□□□□□ -0.77
USP39-210ENST00000459775 KIAA1324Q6UXG2 1013 aaKnown RBP10.26□□□□□ -0.77
USP39-210ENST00000459775 ERN2Q76MJ5 926 aaKnown RBP10.26□□□□□ -0.77
USP39-210ENST00000459775 C10orf67Q8IYJ2 551 aa10.26□□□□□ -0.77
USP39-210ENST00000459775 DCAKDQ8WVC6 231 aa10.26□□□□□ -0.77
USP39-210ENST00000459775 HHIPQ96QV1 700 aa10.26□□□□□ -0.77
USP39-210ENST00000459775 CYTH2Q99418 400 aa10.26□□□□□ -0.77
USP39-210ENST00000459775 OSBPL6Q9BZF3 934 aa10.26□□□□□ -0.77
USP39-210ENST00000459775 NLE1Q9NVX2 485 aaPredicted RBP10.26□□□□□ -0.77
USP39-210ENST00000459775 VPS18Q9P253 973 aa10.26□□□□□ -0.77
USP39-210ENST00000459775 MMP17Q9ULZ9 603 aa10.26□□□□□ -0.77
USP39-210ENST00000459775 RPL26L1Q9UNX3 145 aaKnown RBP10.26□□□□□ -0.77
USP39-210ENST00000459775 PPIL1Q9Y3C6 166 aa10.26□□□□□ -0.77
USP39-210ENST00000459775 HMX2A2RU54 273 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 AP3B1O00203 1094 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 RTCAO00442 366 aaKnown RBP10.25□□□□□ -0.77
USP39-210ENST00000459775 NEMP1O14524 444 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 POLR3GO15318 223 aaPredicted RBP10.25□□□□□ -0.77
USP39-210ENST00000459775 ATP6V1G1O75348 118 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 SCGB1D2O95969 90 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 STX2P32856 288 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 PHBP35232 272 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 MMP12P39900 470 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 LIG3P49916 1009 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 STARD6P59095 220 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 PRAMEP78395 509 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 PRKCQQ04759 706 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 MGAT5Q09328 741 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 TMED2Q15363 201 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 ANGPT1Q15389 498 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 TTMPQ5BVD1 217 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 AGBL4Q5VU57 503 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 ANO7Q6IWH7 933 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 PSAPL1Q6NUJ1 521 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 NEPROQ6NW34 567 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 RAPH1Q70E73 1250 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 TRIML2Q8N7C3 387 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 DTWD2Q8NBA8 298 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 GALNT6Q8NCL4 622 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 GIMAP7Q8NHV1 300 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 LRIG1Q96JA1 1093 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 KLF6Q99612 283 aaPredicted RBP10.25□□□□□ -0.77
USP39-210ENST00000459775 NAT9Q9BTE0 207 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 IL26Q9NPH9 171 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 FBXO6Q9NRD1 293 aaPredicted RBP10.25□□□□□ -0.77
USP39-210ENST00000459775 FBXL12Q9NXK8 326 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 ZFATQ9P243 1243 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 LAMP5Q9UJQ1 280 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 A0A1W2PPM1 405 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 C1QTNF3-AMACRE9PGA6 284 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 AREL1O15033 823 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 RPP40O75818 363 aaKnown RBP10.25□□□□□ -0.77
USP39-210ENST00000459775 HAUS5O94927 633 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 GABRG2P18507 467 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 VIPR1P32241 457 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 MC4RP32245 332 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 SLC1A2P43004 574 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 POLR2LP62875 67 aaKnown RBP10.25□□□□□ -0.77
USP39-210ENST00000459775 XIAPP98170 497 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 ACVR1Q04771 509 aa10.25□□□□□ -0.77
USP39-210ENST00000459775 STAT4Q14765 748 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms