RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 PHYKPLQ8IUZ5 450 aa19.16■□□□□ 0.66
USP40-207ENST00000450940 OR4D9Q8NGE8 314 aa19.16■□□□□ 0.66
USP40-207ENST00000450940 GORASP1Q9BQQ3 440 aa19.16■□□□□ 0.66
USP40-207ENST00000450940 ARFGAP3Q9NP61 516 aa19.16■□□□□ 0.66
USP40-207ENST00000450940 IL26Q9NPH9 171 aa19.16■□□□□ 0.66
USP40-207ENST00000450940 KCNK4Q9NYG8 393 aa19.16■□□□□ 0.66
USP40-207ENST00000450940 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.16■□□□□ 0.66
USP40-207ENST00000450940 IMPACTQ9P2X3 320 aa19.16■□□□□ 0.66
USP40-207ENST00000450940 KCNK6Q9Y257 313 aa19.16■□□□□ 0.66
USP40-207ENST00000450940 TRBV23OR9-2A0A075B6M9 112 aa19.15■□□□□ 0.66
USP40-207ENST00000450940 KIR2DS5A0A0G2JLQ3 304 aa19.15■□□□□ 0.66
USP40-207ENST00000450940 A0A0G2JNG1 304 aa19.15■□□□□ 0.66
USP40-207ENST00000450940 OR5K4A6NMS3 321 aa19.15■□□□□ 0.66
USP40-207ENST00000450940 H7C0C1 242 aa19.15■□□□□ 0.66
USP40-207ENST00000450940 KIR2DS3K7RE56 304 aa19.15■□□□□ 0.66
USP40-207ENST00000450940 VEGFDO43915 354 aa19.15■□□□□ 0.66
USP40-207ENST00000450940 SLC4A1P02730 911 aa19.15■□□□□ 0.66
USP40-207ENST00000450940 F3P13726 295 aa19.15■□□□□ 0.66
USP40-207ENST00000450940 SLC2A4P14672 509 aa19.15■□□□□ 0.66
USP40-207ENST00000450940 CDC25BP30305 580 aa19.15■□□□□ 0.66
USP40-207ENST00000450940 ATP5OP48047 213 aa19.15■□□□□ 0.66
USP40-207ENST00000450940 NAP1L1P55209 391 aaKnown RBP19.15■□□□□ 0.66
USP40-207ENST00000450940 CXADRP78310 365 aa19.15■□□□□ 0.66
USP40-207ENST00000450940 CLN3Q13286 438 aa19.15■□□□□ 0.66
USP40-207ENST00000450940 KIR2DS5Q14953 304 aa19.15■□□□□ 0.66
USP40-207ENST00000450940 ZNF648Q5T619 568 aaPredicted RBP19.15■□□□□ 0.66
USP40-207ENST00000450940 PHF19Q5T6S3 580 aa19.15■□□□□ 0.66
USP40-207ENST00000450940 LSM14AQ8ND56 463 aaKnown RBP19.15■□□□□ 0.66
USP40-207ENST00000450940 GBA3Q9H227 469 aa19.15■□□□□ 0.66
USP40-207ENST00000450940 C10orf88Q9H8K7 445 aa19.15■□□□□ 0.66
USP40-207ENST00000450940 BPIFA1Q9NP55 256 aa19.15■□□□□ 0.66
USP40-207ENST00000450940 PISDQ9UG56 409 aa19.15■□□□□ 0.66
USP40-207ENST00000450940 RSPH14Q9UHP6 348 aa19.15■□□□□ 0.66
USP40-207ENST00000450940 ZNF106Q9H2Y7 1883 aaKnown RBP19.15■□□□□ 0.66
USP40-207ENST00000450940 KMOO15229 486 aa19.14■□□□□ 0.65
USP40-207ENST00000450940 PPFIA2O75334 1257 aa19.14■□□□□ 0.65
USP40-207ENST00000450940 ANXA9O76027 345 aa19.14■□□□□ 0.65
USP40-207ENST00000450940 RBP3P10745 1247 aa19.14■□□□□ 0.65
USP40-207ENST00000450940 PYGMP11217 842 aa19.14■□□□□ 0.65
USP40-207ENST00000450940 ITIH1P19827 911 aa19.14■□□□□ 0.65
USP40-207ENST00000450940 CSF2RBP32927 897 aa19.14■□□□□ 0.65
USP40-207ENST00000450940 ETV5P41161 510 aa19.14■□□□□ 0.65
USP40-207ENST00000450940 CETN2P41208 172 aa19.14■□□□□ 0.65
USP40-207ENST00000450940 TNNT3P45378 269 aaPredicted RBP19.14■□□□□ 0.65
USP40-207ENST00000450940 GEMP55040 296 aa19.14■□□□□ 0.65
USP40-207ENST00000450940 HHEXQ03014 270 aa19.14■□□□□ 0.65
USP40-207ENST00000450940 ATP13A5Q4VNC0 1218 aa19.14■□□□□ 0.65
USP40-207ENST00000450940 KHDC1Q4VXA5 237 aaKnown RBP19.14■□□□□ 0.65
USP40-207ENST00000450940 CCDC181Q5TID7 509 aa19.14■□□□□ 0.65
USP40-207ENST00000450940 NKAIN2Q5VXU1 208 aa19.14■□□□□ 0.65
USP40-207ENST00000450940 ITPRIPL1Q6GPH6 555 aa19.14■□□□□ 0.65
USP40-207ENST00000450940 RANBP10Q6VN20 620 aa19.14■□□□□ 0.65
USP40-207ENST00000450940 ZNF547Q8IVP9 402 aa19.14■□□□□ 0.65
USP40-207ENST00000450940 CDKL3Q8IVW4 592 aaPredicted RBP19.14■□□□□ 0.65
USP40-207ENST00000450940 SLC25A41Q8N5S1 370 aa19.14■□□□□ 0.65
USP40-207ENST00000450940 AVL9Q8NBF6 648 aa19.14■□□□□ 0.65
USP40-207ENST00000450940 IPMKQ8NFU5 416 aa19.14■□□□□ 0.65
USP40-207ENST00000450940 SH3KBP1Q96B97 665 aa19.14■□□□□ 0.65
USP40-207ENST00000450940 SLC38A3Q99624 504 aa19.14■□□□□ 0.65
USP40-207ENST00000450940 FERMT1Q9BQL6 677 aa19.14■□□□□ 0.65
USP40-207ENST00000450940 CPNE5Q9HCH3 593 aa19.14■□□□□ 0.65
USP40-207ENST00000450940 SLC23A2Q9UGH3 650 aa19.14■□□□□ 0.65
USP40-207ENST00000450940 ATMQ13315 3056 aa19.13■□□□□ 0.65
USP40-207ENST00000450940 TK2O00142 265 aa19.13■□□□□ 0.65
USP40-207ENST00000450940 ATXN7O15265 892 aaPredicted RBP19.13■□□□□ 0.65
USP40-207ENST00000450940 TJP3O95049 919 aa19.13■□□□□ 0.65
USP40-207ENST00000450940 THRAP10827 490 aa19.13■□□□□ 0.65
USP40-207ENST00000450940 ZNF7P17097 686 aaPredicted RBP19.13■□□□□ 0.65
USP40-207ENST00000450940 ADRA1AP35348 466 aa19.13■□□□□ 0.65
USP40-207ENST00000450940 EIF3EP60228 445 aaKnown RBP19.13■□□□□ 0.65
USP40-207ENST00000450940 VAC14Q08AM6 782 aa19.13■□□□□ 0.65
USP40-207ENST00000450940 ANKRD20A2Q5SQ80 823 aa19.13■□□□□ 0.65
USP40-207ENST00000450940 ANKRD20A1Q5TYW2 823 aa19.13■□□□□ 0.65
USP40-207ENST00000450940 ANKRD20A3Q5VUR7 823 aa19.13■□□□□ 0.65
USP40-207ENST00000450940 TMEM71Q6P5X7 295 aa19.13■□□□□ 0.65
USP40-207ENST00000450940 WDR74Q6RFH5 385 aaPredicted RBP19.13■□□□□ 0.65
USP40-207ENST00000450940 KIAA1328Q86T90 577 aa19.13■□□□□ 0.65
USP40-207ENST00000450940 SLC9B2Q86UD5 537 aa19.13■□□□□ 0.65
USP40-207ENST00000450940 LRRTM4Q86VH4 590 aa19.13■□□□□ 0.65
USP40-207ENST00000450940 BRSK1Q8TDC3 778 aa19.13■□□□□ 0.65
USP40-207ENST00000450940 CCDC74BQ96LY2 380 aa19.13■□□□□ 0.65
USP40-207ENST00000450940 TIMM29Q9BSF4 260 aa19.13■□□□□ 0.65
USP40-207ENST00000450940 KLC4Q9NSK0 619 aa19.13■□□□□ 0.65
USP40-207ENST00000450940 AKAP7Q9P0M2 348 aaPredicted RBP19.13■□□□□ 0.65
USP40-207ENST00000450940 AMFRQ9UKV5 643 aa19.13■□□□□ 0.65
USP40-207ENST00000450940 KALRNO60229 2985 aa19.12■□□□□ 0.65
USP40-207ENST00000450940 C9orf172C9J069 976 aa19.12■□□□□ 0.65
USP40-207ENST00000450940 F5H423 210 aaPredicted RBP19.12■□□□□ 0.65
USP40-207ENST00000450940 ZNF189O75820 626 aaPredicted RBP19.12■□□□□ 0.65
USP40-207ENST00000450940 CDK14O94921 469 aa19.12■□□□□ 0.65
USP40-207ENST00000450940 AGTP01019 485 aa19.12■□□□□ 0.65
USP40-207ENST00000450940 XRCC1P18887 633 aaPredicted RBP19.12■□□□□ 0.65
USP40-207ENST00000450940 SPAM1P38567 509 aa19.12■□□□□ 0.65
USP40-207ENST00000450940 EPHA4P54764 986 aa19.12■□□□□ 0.65
USP40-207ENST00000450940 UBE2IP63279 158 aaKnown RBP19.12■□□□□ 0.65
USP40-207ENST00000450940 TMEM115Q12893 351 aaPredicted RBP19.12■□□□□ 0.65
USP40-207ENST00000450940 AADACL2Q6P093 401 aa19.12■□□□□ 0.65
USP40-207ENST00000450940 C11orf96Q7Z7L8 435 aa19.12■□□□□ 0.65
USP40-207ENST00000450940 JAMLQ86YT9 394 aa19.12■□□□□ 0.65
USP40-207ENST00000450940 KLHDC8BQ8IXV7 354 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms