RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 PI15O43692 258 aa19.08■□□□□ 0.64
RPS28-202ENST00000449223 PKMP14618 531 aaKnown RBP19.08■□□□□ 0.64
RPS28-202ENST00000449223 KRT4P19013 534 aa19.08■□□□□ 0.64
RPS28-202ENST00000449223 FDXRP22570 491 aa19.08■□□□□ 0.64
RPS28-202ENST00000449223 CD6P30203 668 aa19.08■□□□□ 0.64
RPS28-202ENST00000449223 GPR1P46091 355 aa19.08■□□□□ 0.64
RPS28-202ENST00000449223 CCR5P51681 352 aa19.08■□□□□ 0.64
RPS28-202ENST00000449223 SGCGQ13326 291 aa19.08■□□□□ 0.64
RPS28-202ENST00000449223 CTSL3PQ5NE16 218 aa19.08■□□□□ 0.64
RPS28-202ENST00000449223 HECTD2Q5U5R9 776 aa19.08■□□□□ 0.64
RPS28-202ENST00000449223 RAET1GQ6H3X3 334 aa19.08■□□□□ 0.64
RPS28-202ENST00000449223 MACC1Q6ZN28 852 aa19.08■□□□□ 0.64
RPS28-202ENST00000449223 TSPAN17Q96FV3 270 aa19.08■□□□□ 0.64
RPS28-202ENST00000449223 TOE1Q96GM8 510 aaKnown RBP19.08■□□□□ 0.64
RPS28-202ENST00000449223 COX14Q96I36 57 aa19.08■□□□□ 0.64
RPS28-202ENST00000449223 CABS1Q96KC9 395 aa19.08■□□□□ 0.64
RPS28-202ENST00000449223 BOCQ9BWV1 1114 aa19.08■□□□□ 0.64
RPS28-202ENST00000449223 CLPBQ9H078 707 aa19.08■□□□□ 0.64
RPS28-202ENST00000449223 PCED1AQ9H1Q7 454 aa19.08■□□□□ 0.64
RPS28-202ENST00000449223 SLC39A10Q9ULF5 831 aa19.08■□□□□ 0.64
RPS28-202ENST00000449223 CYP8B1Q9UNU6 501 aa19.08■□□□□ 0.64
RPS28-202ENST00000449223 EML5Q05BV3 1969 aa19.07■□□□□ 0.64
RPS28-202ENST00000449223 UBA6A0AVT1 1052 aaPredicted RBP19.07■□□□□ 0.64
RPS28-202ENST00000449223 FOXO6A8MYZ6 492 aa19.07■□□□□ 0.64
RPS28-202ENST00000449223 WISP3O95389 354 aaPredicted RBP19.07■□□□□ 0.64
RPS28-202ENST00000449223 PAK4O96013 591 aaPredicted RBP19.07■□□□□ 0.64
RPS28-202ENST00000449223 STMN1P16949 149 aa19.07■□□□□ 0.64
RPS28-202ENST00000449223 CRABP2P29373 138 aa19.07■□□□□ 0.64
RPS28-202ENST00000449223 NUDT1P36639 197 aa19.07■□□□□ 0.64
RPS28-202ENST00000449223 SLC18A1P54219 525 aa19.07■□□□□ 0.64
RPS28-202ENST00000449223 TAS2R39P59534 338 aa19.07■□□□□ 0.64
RPS28-202ENST00000449223 RAB10P61026 200 aa19.07■□□□□ 0.64
RPS28-202ENST00000449223 TIAL1Q01085 375 aaKnown RBP eCLIP19.07■□□□□ 0.64
RPS28-202ENST00000449223 USP10Q14694 798 aaKnown RBP19.07■□□□□ 0.64
RPS28-202ENST00000449223 GPATCH11Q8N954 259 aa19.07■□□□□ 0.64
RPS28-202ENST00000449223 BANPQ8N9N5 519 aa19.07■□□□□ 0.64
RPS28-202ENST00000449223 CCDC97Q96F63 343 aaPredicted RBP19.07■□□□□ 0.64
RPS28-202ENST00000449223 ELMO2Q96JJ3 720 aa19.07■□□□□ 0.64
RPS28-202ENST00000449223 SMC6Q96SB8 1091 aa19.07■□□□□ 0.64
RPS28-202ENST00000449223 OLFM1Q99784 485 aa19.07■□□□□ 0.64
RPS28-202ENST00000449223 TEX101Q9BY14 249 aa19.07■□□□□ 0.64
RPS28-202ENST00000449223 CCDC68Q9H2F9 335 aa19.07■□□□□ 0.64
RPS28-202ENST00000449223 PRMT8Q9NR22 394 aaPredicted RBP19.07■□□□□ 0.64
RPS28-202ENST00000449223 GNPTGQ9UJJ9 305 aa19.07■□□□□ 0.64
RPS28-202ENST00000449223 TMEM221A6NGB7 291 aa19.06■□□□□ 0.64
RPS28-202ENST00000449223 CFAP99D6REC4 459 aa19.06■□□□□ 0.64
RPS28-202ENST00000449223 M0R296 226 aa19.06■□□□□ 0.64
RPS28-202ENST00000449223 PRPF4O43172 522 aaKnown RBP eCLIP19.06■□□□□ 0.64
RPS28-202ENST00000449223 TYROBPO43914 113 aa19.06■□□□□ 0.64
RPS28-202ENST00000449223 AP2A2O94973 939 aa19.06■□□□□ 0.64
RPS28-202ENST00000449223 SLC25A14O95258 325 aaPredicted RBP19.06■□□□□ 0.64
RPS28-202ENST00000449223 MPOP05164 745 aa19.06■□□□□ 0.64
RPS28-202ENST00000449223 RALBP11234 206 aa19.06■□□□□ 0.64
RPS28-202ENST00000449223 TYK2P29597 1187 aa19.06■□□□□ 0.64
RPS28-202ENST00000449223 IRF4Q15306 451 aa19.06■□□□□ 0.64
RPS28-202ENST00000449223 CMC1Q7Z7K0 106 aa19.06■□□□□ 0.64
RPS28-202ENST00000449223 LCA5Q86VQ0 697 aa19.06■□□□□ 0.64
RPS28-202ENST00000449223 CEP97Q8IW35 865 aa19.06■□□□□ 0.64
RPS28-202ENST00000449223 PLA2G15Q8NCC3 412 aa19.06■□□□□ 0.64
RPS28-202ENST00000449223 NDNQ99608 321 aa19.06■□□□□ 0.64
RPS28-202ENST00000449223 EPHX3Q9H6B9 360 aa19.06■□□□□ 0.64
RPS28-202ENST00000449223 QSOX1O00391 747 aa19.05■□□□□ 0.64
RPS28-202ENST00000449223 SLC35E2BP0CK96 405 aa19.05■□□□□ 0.64
RPS28-202ENST00000449223 PYGBP11216 843 aa19.05■□□□□ 0.64
RPS28-202ENST00000449223 ATP1B2P14415 290 aaPredicted RBP19.05■□□□□ 0.64
RPS28-202ENST00000449223 CREB1P16220 341 aa19.05■□□□□ 0.64
RPS28-202ENST00000449223 FMO4P31512 558 aa19.05■□□□□ 0.64
RPS28-202ENST00000449223 SLC26A3P40879 764 aa19.05■□□□□ 0.64
RPS28-202ENST00000449223 CDKN2DP55273 166 aa19.05■□□□□ 0.64
RPS28-202ENST00000449223 PDE1CQ14123 709 aaPredicted RBP19.05■□□□□ 0.64
RPS28-202ENST00000449223 KHDC1Q4VXA5 237 aaKnown RBP19.05■□□□□ 0.64
RPS28-202ENST00000449223 TMEM31Q5JXX7 168 aa19.05■□□□□ 0.64
RPS28-202ENST00000449223 SLC41A1Q8IVJ1 513 aa19.05■□□□□ 0.64
RPS28-202ENST00000449223 HIC2Q96JB3 615 aa19.05■□□□□ 0.64
RPS28-202ENST00000449223 TPSD1Q9BZJ3 242 aa19.05■□□□□ 0.64
RPS28-202ENST00000449223 CAB39LQ9H9S4 337 aa19.05■□□□□ 0.64
RPS28-202ENST00000449223 MBNL1Q9NR56 388 aaKnown RBP19.05■□□□□ 0.64
RPS28-202ENST00000449223 LATS2Q9NRM7 1088 aa19.05■□□□□ 0.64
RPS28-202ENST00000449223 TAS2R13Q9NYV9 303 aa19.05■□□□□ 0.64
RPS28-202ENST00000449223 SMG5Q9UPR3 1016 aaKnown RBP19.05■□□□□ 0.64
RPS28-202ENST00000449223 CACNA1IQ9P0X4 2223 aa19.05■□□□□ 0.64
RPS28-202ENST00000449223 PRR23AA6NEV1 266 aa19.05■□□□□ 0.64
RPS28-202ENST00000449223 FAM47DPA6NHR8 397 aa19.05■□□□□ 0.64
RPS28-202ENST00000449223 IGHV4-34P06331 123 aa19.05■□□□□ 0.64
RPS28-202ENST00000449223 C2P06681 752 aa19.05■□□□□ 0.64
RPS28-202ENST00000449223 HOXC4P09017 264 aaPredicted RBP19.05■□□□□ 0.64
RPS28-202ENST00000449223 TDGF1P13385 188 aa19.05■□□□□ 0.64
RPS28-202ENST00000449223 BRAFP15056 766 aa19.05■□□□□ 0.64
RPS28-202ENST00000449223 NR1D1P20393 614 aa19.05■□□□□ 0.64
RPS28-202ENST00000449223 OAS2P29728 719 aaKnown RBP19.05■□□□□ 0.64
RPS28-202ENST00000449223 SKIV2L2P42285 1042 aaKnown RBP19.05■□□□□ 0.64
RPS28-202ENST00000449223 SLC12A2P55011 1212 aa19.05■□□□□ 0.64
RPS28-202ENST00000449223 KIAA0895LQ68EN5 471 aa19.05■□□□□ 0.64
RPS28-202ENST00000449223 CLEC14AQ86T13 490 aa19.05■□□□□ 0.64
RPS28-202ENST00000449223 KRT222Q8N1A0 295 aa19.05■□□□□ 0.64
RPS28-202ENST00000449223 C4orf33Q8N1A6 199 aa19.05■□□□□ 0.64
RPS28-202ENST00000449223 APOPT1Q96IL0 206 aa19.05■□□□□ 0.64
RPS28-202ENST00000449223 ZCCHC2Q9C0B9 1178 aaKnown RBP19.05■□□□□ 0.64
RPS28-202ENST00000449223 TRIM39Q9HCM9 518 aa19.05■□□□□ 0.64
RPS28-202ENST00000449223 KLHL42Q9P2K6 505 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms