RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 VPS35Q96QK1 796 aa7.48□□□□□ -1.21
AC004540.1-206ENST00000448056 ARRDC1-AS1Q9H2J1 176 aa7.48□□□□□ -1.21
AC004540.1-206ENST00000448056 FAM96AQ9H5X1 160 aa7.48□□□□□ -1.21
AC004540.1-206ENST00000448056 WDR26Q9H7D7 661 aa7.48□□□□□ -1.21
AC004540.1-206ENST00000448056 LRRC4CQ9HCJ2 640 aa7.48□□□□□ -1.21
AC004540.1-206ENST00000448056 TRIM39Q9HCM9 518 aa7.48□□□□□ -1.21
AC004540.1-206ENST00000448056 PHPT1Q9NRX4 125 aaPredicted RBP7.48□□□□□ -1.21
AC004540.1-206ENST00000448056 GPR27Q9NS67 375 aa7.48□□□□□ -1.21
AC004540.1-206ENST00000448056 C20orf96Q9NUD7 363 aaPredicted RBP7.48□□□□□ -1.21
AC004540.1-206ENST00000448056 FAM86C1Q9NVL1 165 aa7.48□□□□□ -1.21
AC004540.1-206ENST00000448056 TOR4AQ9NXH8 423 aa7.48□□□□□ -1.21
AC004540.1-206ENST00000448056 MOCS1Q9NZB8 636 aa7.48□□□□□ -1.21
AC004540.1-206ENST00000448056 MYO15AQ9UKN7 3530 aa7.48□□□□□ -1.21
AC004540.1-206ENST00000448056 CDV3Q9UKY7 258 aaKnown RBP7.48□□□□□ -1.21
AC004540.1-206ENST00000448056 SMG5Q9UPR3 1016 aaKnown RBP7.48□□□□□ -1.21
AC004540.1-206ENST00000448056 ANKRD6Q9Y2G4 727 aa7.48□□□□□ -1.21
AC004540.1-206ENST00000448056 MAP4K5Q9Y4K4 846 aa7.48□□□□□ -1.21
AC004540.1-206ENST00000448056 PCDHGA5Q9Y5G8 931 aa7.48□□□□□ -1.21
AC004540.1-206ENST00000448056 GON4LQ3T8J9 2241 aa7.48□□□□□ -1.21
AC004540.1-206ENST00000448056 ATXN2Q99700 1313 aaKnown RBP7.48□□□□□ -1.21
AC004540.1-206ENST00000448056 BPTFQ12830 3046 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 SDK1Q7Z5N4 2213 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 TRBV5-4A0A0C4DH59 114 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 SPTY2D1-AS1A0A0U1RR47 76 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 A0A1B0GVT2 93 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 TMEM202A6NGA9 273 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 GOLGA8KD6RF30 607 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 PROB1E7EW31 1015 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 GOLGA8TH3BQL2 631 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 CACNB4O00305 520 aaPredicted RBP7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 TNFRSF10CO14798 259 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 GPR39O43194 453 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 MAGEC1O60732 1142 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 LMNAP02545 664 aaKnown RBP7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 FUCA1P04066 466 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 CEACAM5P06731 702 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 TUBBP07437 444 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 PRSS56P0CW18 603 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 ERVK-10P10266 1014 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 MYCLP1P12525 358 aaPredicted RBP7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 MCM3P25205 808 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 ACRV1P26436 265 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 HTR1BP28222 390 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 SSTR1P30872 391 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 FOXN2P32314 431 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 MPLP40238 635 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 POLD2P49005 469 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 THOP1P52888 689 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 C21orf59P57076 290 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 NXPH1P58417 271 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 KIAA1024LP59773 190 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 GPX6P59796 221 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 TMEM115Q12893 351 aaPredicted RBP7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 PDE1CQ14123 709 aaPredicted RBP7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 PTK2BQ14289 1009 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 FZD2Q14332 565 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 SEMA3AQ14563 771 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 NFATC4Q14934 902 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 KYNUQ16719 465 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 KIF19Q2TAC6 998 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 FASTKD1Q53R41 847 aaKnown RBP7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 LDLRAP1Q5SW96 308 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 TPRG1LQ5T0D9 272 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 ZNF648Q5T619 568 aaPredicted RBP7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 GPRC6AQ5T6X5 926 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 LYPLAL1Q5VWZ2 237 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 MRNIPQ6NTE8 343 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 PSAPL1Q6NUJ1 521 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 TRMT10BQ6PF06 316 aaKnown RBP7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 SLC23A3Q6PIS1 610 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 ENPP7Q6UWV6 458 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 LAYNQ6UX15 382 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 CERS6Q6ZMG9 384 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 SDCCAG8Q86SQ7 713 aaPredicted RBP7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 SERPINA9Q86WD7 417 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 SPATS2Q86XZ4 545 aaKnown RBP7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 UNC5BQ8IZJ1 945 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 SLC22A18ASQ8N1D0 253 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 NXPE1Q8N323 547 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 PNPLA1Q8N8W4 532 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 GPR150Q8NGU9 434 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 GSDMBQ8TAX9 411 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 GDAP1Q8TB36 358 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 ULK4Q96C45 1275 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 TXLNGYQ9BZA5 131 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 ARFGAP3Q9NP61 516 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 CATSPERZQ9NTU4 200 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 SMOXQ9NWM0 555 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 IL1RAPL1Q9NZN1 696 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 MARCH4Q9P2E8 410 aaPredicted RBP7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 CRLS1Q9UJA2 301 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 RAB21Q9UL25 225 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 SLC6A14Q9UN76 642 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 SLC17A4Q9Y2C5 497 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 TMEM98Q9Y2Y6 226 aa7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 OAS3Q9Y6K5 1087 aaKnown RBP7.47□□□□□ -1.21
AC004540.1-206ENST00000448056 THADAQ6YHU6 1953 aa7.46□□□□□ -1.21
AC004540.1-206ENST00000448056 IGLV3-16A0A075B6K0 115 aa7.46□□□□□ -1.22
AC004540.1-206ENST00000448056 PATE3B3GLJ2 98 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms