RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 WISP3O95389 354 aaPredicted RBP5.97□□□□□ -1.45
VPS50-205ENST00000441602 ELFN1P0C7U0 828 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 PSMC3P17980 439 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 GRIA2P42262 883 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 IDH3AP50213 366 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 HNRNPA1L2Q32P51 320 aaKnown RBP5.97□□□□□ -1.45
VPS50-205ENST00000441602 SH2D4BQ5SQS7 431 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 TTC23LQ6PF05 361 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 EP400NLQ6ZTU2 488 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 FRMD7Q6ZUT3 714 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 SPRED2Q7Z698 418 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 ISCA2Q86U28 154 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 CUZD1Q86UP6 607 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 SPATA6LQ8N4H0 392 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 ZNF781Q8N8C0 355 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 CEP70Q8NHQ1 597 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 RAB7BQ96AH8 199 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 ELSPBP1Q96BH3 223 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 PHF21BQ96EK2 531 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 MRGPRX3Q96LB0 322 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 SORT1Q99523 831 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 TRMT61BQ9BVS5 477 aaKnown RBP5.97□□□□□ -1.45
VPS50-205ENST00000441602 NUSAP1Q9BXS6 441 aaKnown RBP5.97□□□□□ -1.45
VPS50-205ENST00000441602 P2RY12Q9H244 342 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 KCNK13Q9HB14 408 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 SLC40A1Q9NP59 571 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 PCDH10Q9P2E7 1040 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 WASF2Q9Y6W5 498 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 NPEPPSL1A6NEC2 478 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 C16orf96A6NNT2 1141 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 MATN2O00339 956 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 NRG2O14511 850 aaPredicted RBP5.97□□□□□ -1.45
VPS50-205ENST00000441602 LZTS3O60299 673 aaPredicted RBP5.97□□□□□ -1.45
VPS50-205ENST00000441602 ECI2O75521 394 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 ZNF821O75541 412 aaPredicted RBP5.97□□□□□ -1.45
VPS50-205ENST00000441602 ITGB7P26010 798 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 TARSP26639 723 aaKnown RBP5.97□□□□□ -1.45
VPS50-205ENST00000441602 ELAVL3Q14576 367 aaKnown RBP5.97□□□□□ -1.45
VPS50-205ENST00000441602 ACOX1Q15067 660 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 TRIM68Q6AZZ1 485 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 EPGNQ6UW88 154 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 ZNF765Q7L2R6 523 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 ETFBKMTQ8IXQ9 262 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 CLYBLQ8N0X4 340 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 TCAIMQ8N3R3 496 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 SIDT2Q8NBJ9 832 aaKnown RBP5.97□□□□□ -1.45
VPS50-205ENST00000441602 RIN3Q8TB24 985 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 FRS2Q8WU20 508 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 ANKRD49Q8WVL7 239 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 EGFL8Q99944 293 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 GDF15Q99988 308 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 FAM83CQ9BQN1 747 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 UNKQ9C0B0 810 aaKnown RBP5.97□□□□□ -1.45
VPS50-205ENST00000441602 COG4Q9H9E3 785 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 PCDH12Q9NPG4 1184 aa5.97□□□□□ -1.45
VPS50-205ENST00000441602 SLC25A14O95258 325 aaPredicted RBP5.96□□□□□ -1.45
VPS50-205ENST00000441602 ENO1P06733 434 aaKnown RBP5.96□□□□□ -1.45
VPS50-205ENST00000441602 C1SP09871 688 aa5.96□□□□□ -1.45
VPS50-205ENST00000441602 HIST1H2AGP0C0S8 130 aaPredicted RBP5.96□□□□□ -1.45
VPS50-205ENST00000441602 THRAP10827 490 aa5.96□□□□□ -1.45
VPS50-205ENST00000441602 CHRM1P11229 460 aaPredicted RBP5.96□□□□□ -1.45
VPS50-205ENST00000441602 TIMP2P16035 220 aa5.96□□□□□ -1.45
VPS50-205ENST00000441602 VCLP18206 1134 aa5.96□□□□□ -1.45
VPS50-205ENST00000441602 HIST1H2ADP20671 130 aa5.96□□□□□ -1.45
VPS50-205ENST00000441602 GMPRP36959 345 aa5.96□□□□□ -1.45
VPS50-205ENST00000441602 ARL1P40616 181 aaPredicted RBP5.96□□□□□ -1.45
VPS50-205ENST00000441602 PKNOX1P55347 436 aa5.96□□□□□ -1.45
VPS50-205ENST00000441602 HYAL1Q12794 435 aa5.96□□□□□ -1.45
VPS50-205ENST00000441602 TSNQ15631 228 aaKnown RBP5.96□□□□□ -1.45
VPS50-205ENST00000441602 RBBP7Q16576 425 aa5.96□□□□□ -1.45
VPS50-205ENST00000441602 PFKFB4Q16877 469 aa5.96□□□□□ -1.45
VPS50-205ENST00000441602 CDKL4Q5MAI5 379 aa5.96□□□□□ -1.45
VPS50-205ENST00000441602 CTSL3PQ5NE16 218 aa5.96□□□□□ -1.45
VPS50-205ENST00000441602 ZNF678Q5SXM1 525 aa5.96□□□□□ -1.45
VPS50-205ENST00000441602 METTL2BQ6P1Q9 378 aaKnown RBP5.96□□□□□ -1.45
VPS50-205ENST00000441602 CPNE9Q8IYJ1 553 aa5.96□□□□□ -1.45
VPS50-205ENST00000441602 PIP4K2CQ8TBX8 421 aa5.96□□□□□ -1.45
VPS50-205ENST00000441602 CD200R1Q8TD46 325 aa5.96□□□□□ -1.45
VPS50-205ENST00000441602 CXorf40AQ8TE69 158 aa5.96□□□□□ -1.45
VPS50-205ENST00000441602 HIST1H2AHQ96KK5 128 aa5.96□□□□□ -1.45
VPS50-205ENST00000441602 BIRC8Q96P09 236 aa5.96□□□□□ -1.45
VPS50-205ENST00000441602 CCT7Q99832 543 aa5.96□□□□□ -1.45
VPS50-205ENST00000441602 HIST1H2AJQ99878 128 aa5.96□□□□□ -1.45
VPS50-205ENST00000441602 H2AFJQ9BTM1 129 aa5.96□□□□□ -1.45
VPS50-205ENST00000441602 NMUR2Q9GZQ4 415 aa5.96□□□□□ -1.45
VPS50-205ENST00000441602 MMADHCQ9H3L0 296 aaPredicted RBP5.96□□□□□ -1.45
VPS50-205ENST00000441602 ZNF395Q9H8N7 513 aaPredicted RBP5.96□□□□□ -1.45
VPS50-205ENST00000441602 FBRSQ9HAH7 460 aa5.96□□□□□ -1.45
VPS50-205ENST00000441602 LATS2Q9NRM7 1088 aa5.96□□□□□ -1.45
VPS50-205ENST00000441602 RIC8BQ9NVN3 520 aa5.96□□□□□ -1.45
VPS50-205ENST00000441602 SMOXQ9NWM0 555 aa5.96□□□□□ -1.45
VPS50-205ENST00000441602 H0Y858 1186 aa5.96□□□□□ -1.46
VPS50-205ENST00000441602 UBXN8O00124 270 aa5.96□□□□□ -1.46
VPS50-205ENST00000441602 WNT9AO14904 365 aa5.96□□□□□ -1.46
VPS50-205ENST00000441602 SYNCRIPO60506 623 aaKnown RBP5.96□□□□□ -1.46
VPS50-205ENST00000441602 C8GP07360 202 aa5.96□□□□□ -1.46
VPS50-205ENST00000441602 ENO2P09104 434 aaPredicted RBP5.96□□□□□ -1.46
VPS50-205ENST00000441602 GSTM1P09488 218 aa5.96□□□□□ -1.46
VPS50-205ENST00000441602 SBK3P0C264 359 aa5.96□□□□□ -1.46
VPS50-205ENST00000441602 PRSS56P0CW18 603 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms